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Mouse SNP Summary
Symbol
Name
ID
D5Mit287
DNA segment, Chr 5, Massachusetts Institute of Technology 287
MGI:100429

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Showing SNP(s) 1 - 62 of 62

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586485986
MGI SNP Detail
Chr5:148988751 Cpgi17090 within coordinates of
D5Mit287 1918 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
Rr378801 within coordinates of
Tssr54619 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs580089991
MGI SNP Detail
Chr5:148988948 Cpgi17090 within coordinates of
D5Mit287 1721 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A C A A A A C A A A A C A A A A A A A A A A A A
rs243633590
MGI SNP Detail
Chr5:148989146 Cpgi17090 within coordinates of
D5Mit287 1523 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A G A A
rs255891020
MGI SNP Detail
Chr5:148989158 Cpgi17090 within coordinates of
D5Mit287 1511 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C T C C
rs583536773
MGI SNP Detail
Chr5:148989253 Cpgi17090 within coordinates of
D5Mit287 1416 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223199967
MGI SNP Detail
Chr5:148989267 Cpgi17090 within coordinates of
D5Mit287 1402 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
SNP A/C C C A C C C C C C C C C C C C C C C C A C C A C C C C C A C C C A C C C C C C
rs243008089
MGI SNP Detail
Chr5:148989279 Cpgi17090 within coordinates of
D5Mit287 1390 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
SNP C/G G C C G C G C C G G G C G C C G C C G C G C C G G G C C C G C C C G C G C
rs218085581
MGI SNP Detail
Chr5:148989286 Cpgi17090 within coordinates of
D5Mit287 1383 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
SNP C/T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs240334265
MGI SNP Detail
Chr5:148989356 Cpgi17090 within coordinates of
D5Mit287 1313 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
SNP A/T A A T A A A A A A A A A A A A A A A A A A A A A A T A A A T A A A A A T A A A T A A A A A
rs585725170
MGI SNP Detail
Chr5:148989376 Cpgi17090 within coordinates of
D5Mit287 1293 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs579745899
MGI SNP Detail
Chr5:148989402 Cpgi17090 within coordinates of
D5Mit287 1267 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257085457
MGI SNP Detail
Chr5:148989659 Cpgi17090 within coordinates of
D5Mit287 1010 bp proximal
Hmgb1 within coordinates of
Rr124812 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216569742
MGI SNP Detail
Chr5:148990091 Cpgi17090 within coordinates of
D5Mit287 578 bp proximal
Rr124812 within coordinates of
Rr399531 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T A T T T T T T T T T T T
rs231947881
MGI SNP Detail
Chr5:148990175 Cpgi17090 within coordinates of
D5Mit287 494 bp proximal
Rr124812 within coordinates of
SNP C/T C C C C T C C C C T C C C C C C C C C C C C C C T C C C T C C C C C T T C C C T C C C C C C
rs252244692
MGI SNP Detail
Chr5:148990178 Cpgi17090 within coordinates of
D5Mit287 491 bp proximal
Rr124812 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218190495
MGI SNP Detail
Chr5:148990180 Cpgi17090 within coordinates of
D5Mit287 489 bp proximal
Rr124812 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230728205
MGI SNP Detail
Chr5:148990240 Cpgi17090 within coordinates of
D5Mit287 429 bp proximal
Rr124812 within coordinates of
SNP C/T C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C T
rs260525678
MGI SNP Detail
Chr5:148990243 Cpgi17090 within coordinates of
D5Mit287 426 bp proximal
Rr124812 within coordinates of
SNP C/G C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227622215
MGI SNP Detail
Chr5:148990430 Cpgi17090 within coordinates of
D5Mit287 239 bp proximal
Rr124812 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245876184
MGI SNP Detail
Chr5:148990433 Cpgi17090 within coordinates of
D5Mit287 236 bp proximal
Rr124812 within coordinates of
SNP C/T T T T C C T C C T C C C T T T T T T T C T T T T T C C T T C T C T C T T T T T T C C T C T C T T T C T
rs263514005
MGI SNP Detail
Chr5:148990482 D5Mit287 187 bp proximal
Rr124812 within coordinates of
SNP C/G C G
rs583259954
MGI SNP Detail
Chr5:148990502 D5Mit287 167 bp proximal
Rr124812 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C A C C C C C A
rs265782359
MGI SNP Detail
Chr5:148990513 D5Mit287 156 bp proximal
Rr124812 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224400027
MGI SNP Detail
Chr5:148990620 D5Mit287 49 bp proximal
Rr124812 within coordinates of
SNP C/T C T
rs237246864
MGI SNP Detail
Chr5:148990645 D5Mit287 24 bp proximal
Rr124812 within coordinates of
SNP C/G C C C G C C G G C C G C C C C C C C C C C C C G G C C C C G C C C C C C C G C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256049488
MGI SNP Detail
Chr5:148990646 D5Mit287 23 bp proximal
Rr124812 within coordinates of
SNP C/G C C C G C C G G C C G C C C C C C C C C C C C C G G C C C C G C C C C C C C C C C C G C C C C C G C C
rs580868196
MGI SNP Detail
Chr5:148990688 D5Mit287 within coordinates of
Rr124812 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251596955
MGI SNP Detail
Chr5:148990704 D5Mit287 within coordinates of
Rr124812 within coordinates of
SNP C/T C T
rs264093953
MGI SNP Detail
Chr5:148990736 D5Mit287 within coordinates of
Rr124812 within coordinates of
SNP C/G G C
rs223140557
MGI SNP Detail
Chr5:148990891 D5Mit287 74 bp distal
Rr124812 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A
rs221185067
MGI SNP Detail
Chr5:148990938 D5Mit287 121 bp distal
Rr124812 within coordinates of
SNP A/C A C
rs263881563
MGI SNP Detail
Chr5:148990995 D5Mit287 178 bp distal
Rr124812 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C A C C C C C A
rs234938975
MGI SNP Detail
Chr5:148991004 D5Mit287 187 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252273387
MGI SNP Detail
Chr5:148991054 D5Mit287 237 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T G T T T T
rs33343556
MGI SNP Detail
Chr5:148991108 D5Mit287 291 bp distal
SNP A/T A A T A A T A
rs231588537
MGI SNP Detail
Chr5:148991295 D5Mit287 478 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245849328
MGI SNP Detail
Chr5:148991339 D5Mit287 522 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T T T T T T T T T T T T T T T T C T T T T
rs212248429
MGI SNP Detail
Chr5:148991503 D5Mit287 686 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584026452
MGI SNP Detail
Chr5:148991763 D5Mit287 946 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230928579
MGI SNP Detail
Chr5:148991768 D5Mit287 951 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263786101
MGI SNP Detail
Chr5:148991938 D5Mit287 1121 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226835778
MGI SNP Detail
Chr5:148991957 D5Mit287 1140 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240402570
MGI SNP Detail
Chr5:148992038 D5Mit287 1221 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs259851728
MGI SNP Detail
Chr5:148992112 D5Mit287 1295 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs219566927
MGI SNP Detail
Chr5:148992133 D5Mit287 1316 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238658951
MGI SNP Detail
Chr5:148992161 D5Mit287 1344 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A G A A A A A A A G A A A A
rs217757170
MGI SNP Detail
Chr5:148992233 D5Mit287 1416 bp distal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs265832126
MGI SNP Detail
Chr5:148992237 D5Mit287 1420 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G
rs233578855
MGI SNP Detail
Chr5:148992239 D5Mit287 1422 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G
rs258346155
MGI SNP Detail
Chr5:148992291 D5Mit287 1474 bp distal
SNP A/G A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263565566
MGI SNP Detail
Chr5:148992369 D5Mit287 1552 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs225589573
MGI SNP Detail
Chr5:148992544 D5Mit287 1727 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs245620537
MGI SNP Detail
Chr5:148992577 D5Mit287 1760 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs211985204
MGI SNP Detail
Chr5:148992589 D5Mit287 1772 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T T
rs225735732
MGI SNP Detail
Chr5:148992593 D5Mit287 1776 bp distal
SNP A/G G A
rs254122694
MGI SNP Detail
Chr5:148992633 D5Mit287 1816 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs219138497
MGI SNP Detail
Chr5:148992711 D5Mit287 1894 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237964168
MGI SNP Detail
Chr5:148992732 D5Mit287 1915 bp distal
SNP A/T T T T T A T T T T A T T T T T T T T T A T A A T T T T A T A A T T A A T T T T T A A A T T A A T A T T A A
rs263542084
MGI SNP Detail
Chr5:148992752 D5Mit287 1935 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs213990702
MGI SNP Detail
Chr5:148992753 D5Mit287 1936 bp distal
SNP A/G A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A G A A A A A A G G A A A G A A A A A A
rs232506808
MGI SNP Detail
Chr5:148992775 D5Mit287 1958 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs247163778
MGI SNP Detail
Chr5:148992814 D5Mit287 1997 bp distal
SNP A/G G A
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Showing SNP(s) 1 - 62 of 62

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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

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