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Mouse SNP Summary
Symbol
Name
ID
D3Mit294
DNA segment, Chr 3, Massachusetts Institute of Technology 294
MGI:100541

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223536737
MGI SNP Detail
Alliance Variant
Chr3:153204062 D3Mit294 1996 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247619094
MGI SNP Detail
Alliance Variant
Chr3:153204098 D3Mit294 1960 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216802616
MGI SNP Detail
Alliance Variant
Chr3:153204108 D3Mit294 1950 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G G G C G G G G G G G C G G G G
rs233456314
MGI SNP Detail
Alliance Variant
Chr3:153204109 D3Mit294 1949 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G T G G G G
rs252539228
MGI SNP Detail
Alliance Variant
Chr3:153204156 D3Mit294 1902 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C T C C C C
rs215678024
MGI SNP Detail
Alliance Variant
Chr3:153204170 D3Mit294 1888 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs236556916
MGI SNP Detail
Alliance Variant
Chr3:153204242 D3Mit294 1816 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs250145892
MGI SNP Detail
Alliance Variant
Chr3:153204243 D3Mit294 1815 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs211749625
MGI SNP Detail
Alliance Variant
Chr3:153204254 D3Mit294 1804 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs236047235
MGI SNP Detail
Alliance Variant
Chr3:153204310 D3Mit294 1748 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254158032
MGI SNP Detail
Alliance Variant
Chr3:153204313 D3Mit294 1745 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C A C C C C
rs224744492
MGI SNP Detail
Alliance Variant
Chr3:153204325 D3Mit294 1733 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs247684292
MGI SNP Detail
Alliance Variant
Chr3:153204335 D3Mit294 1723 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs257742309
MGI SNP Detail
Alliance Variant
Chr3:153204358 D3Mit294 1700 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C C C C C C C C G C C C C C C C G C C C C
rs222138133
MGI SNP Detail
Alliance Variant
Chr3:153204359 D3Mit294 1699 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs236679465
MGI SNP Detail
Alliance Variant
Chr3:153204360 D3Mit294 1698 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs253836605
MGI SNP Detail
Alliance Variant
Chr3:153204388 D3Mit294 1670 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs223584039
MGI SNP Detail
Alliance Variant
Chr3:153204392 D3Mit294 1666 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs241594538
MGI SNP Detail
Alliance Variant
Chr3:153204528 D3Mit294 1530 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs259258768
MGI SNP Detail
Alliance Variant
Chr3:153204547 D3Mit294 1511 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs232526560
MGI SNP Detail
Alliance Variant
Chr3:153204626 D3Mit294 1432 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs257659232
MGI SNP Detail
Alliance Variant
Chr3:153204635 D3Mit294 1423 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G G A A
rs215060721
MGI SNP Detail
Alliance Variant
Chr3:153204645 D3Mit294 1413 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230493328
MGI SNP Detail
Alliance Variant
Chr3:153204720 D3Mit294 1338 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244620030
MGI SNP Detail
Alliance Variant
Chr3:153204760 D3Mit294 1298 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212410490
MGI SNP Detail
Alliance Variant
Chr3:153204780 D3Mit294 1278 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236096486
MGI SNP Detail
Alliance Variant
Chr3:153204894 D3Mit294 1164 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G G G C G G G G G G G C G G G G
rs254023738
MGI SNP Detail
Alliance Variant
Chr3:153204928 D3Mit294 1130 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30636514
MGI SNP Detail
Alliance Variant
Chr3:153204940 D3Mit294 1118 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C T C C C C C C C C
rs237644143
MGI SNP Detail
Alliance Variant
Chr3:153204961 D3Mit294 1097 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C
rs262302852
MGI SNP Detail
Alliance Variant
Chr3:153204992 D3Mit294 1066 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222451406
MGI SNP Detail
Alliance Variant
Chr3:153205019 D3Mit294 1039 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs236534740
MGI SNP Detail
Alliance Variant
Chr3:153205024 D3Mit294 1034 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs248159733
MGI SNP Detail
Alliance Variant
Chr3:153205038 D3Mit294 1020 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A A A A A A A A A A A A A A A A T A A A A
rs222641541
MGI SNP Detail
Alliance Variant
Chr3:153205039 D3Mit294 1019 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T T T T T T T T T T T T T T T T T A T T T T
rs241657054
MGI SNP Detail
Alliance Variant
Chr3:153205048 D3Mit294 1010 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C C C C C C C C C C C C C C C C A C C C C
rs264056833
MGI SNP Detail
Alliance Variant
Chr3:153205063 D3Mit294 995 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs225460542
MGI SNP Detail
Alliance Variant
Chr3:153205075 D3Mit294 983 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs245507980
MGI SNP Detail
Alliance Variant
Chr3:153205109 D3Mit294 949 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs265321066
MGI SNP Detail
Alliance Variant
Chr3:153205118 D3Mit294 940 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs226068715
MGI SNP Detail
Alliance Variant
Chr3:153205176 D3Mit294 882 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578275993
MGI SNP Detail
Alliance Variant
Chr3:153205255 D3Mit294 803 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs244528204
MGI SNP Detail
Alliance Variant
Chr3:153205261 D3Mit294 797 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256402724
MGI SNP Detail
Alliance Variant
Chr3:153205321 D3Mit294 737 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs229559631
MGI SNP Detail
Alliance Variant
Chr3:153205325 D3Mit294 733 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs247736916
MGI SNP Detail
Alliance Variant
Chr3:153205383 D3Mit294 675 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs216307458
MGI SNP Detail
Alliance Variant
Chr3:153205415 D3Mit294 643 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs239510869
MGI SNP Detail
Alliance Variant
Chr3:153205478 D3Mit294 580 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251314806
MGI SNP Detail
Alliance Variant
Chr3:153205500 D3Mit294 558 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G A G G G G
rs213883444
MGI SNP Detail
Alliance Variant
Chr3:153205543 D3Mit294 515 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230626830
MGI SNP Detail
Alliance Variant
Chr3:153205609 D3Mit294 449 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G/T A A A A A A A A A A A A A A A A A A A G A A T A A A A G A A A A A A A A A A A T A A A A A A G A A A A
rs248045892
MGI SNP Detail
Alliance Variant
Chr3:153205674 D3Mit294 384 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222711746
MGI SNP Detail
Alliance Variant
Chr3:153205706 D3Mit294 352 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G A G G G G
rs234274187
MGI SNP Detail
Alliance Variant
Chr3:153205745 D3Mit294 313 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263314173
MGI SNP Detail
Alliance Variant
Chr3:153205746 D3Mit294 312 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G A G G G G
rs225050904
MGI SNP Detail
Alliance Variant
Chr3:153205756 D3Mit294 302 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C T C C C C
rs247864275
MGI SNP Detail
Alliance Variant
Chr3:153205772 D3Mit294 286 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G A G G G G
rs262878871
MGI SNP Detail
Alliance Variant
Chr3:153205800 D3Mit294 258 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219698145
MGI SNP Detail
Alliance Variant
Chr3:153205817 D3Mit294 241 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs238394801
MGI SNP Detail
Alliance Variant
Chr3:153205838 D3Mit294 220 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T T A T T T T T T T A T T T T
rs256274063
MGI SNP Detail
Alliance Variant
Chr3:153205897 D3Mit294 161 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229440126
MGI SNP Detail
Alliance Variant
Chr3:153205904 D3Mit294 154 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs254285198
MGI SNP Detail
Alliance Variant
Chr3:153205952 D3Mit294 106 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C A C C C C
rs265805164
MGI SNP Detail
Alliance Variant
Chr3:153205993 D3Mit294 65 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs582029279
MGI SNP Detail
Alliance Variant
Chr3:153206084 D3Mit294 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs231371172
MGI SNP Detail
Alliance Variant
Chr3:153206140 D3Mit294 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T T T T T T T T T T T T T T T T T T A
rs255847987
MGI SNP Detail
Alliance Variant
Chr3:153206141 D3Mit294 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213513524
MGI SNP Detail
Alliance Variant
Chr3:153206148 D3Mit294 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230508215
MGI SNP Detail
Alliance Variant
Chr3:153206308 D3Mit294 129 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs242233469
MGI SNP Detail
Alliance Variant
Chr3:153206318 D3Mit294 139 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217240747
MGI SNP Detail
Alliance Variant
Chr3:153206325 D3Mit294 146 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234129477
MGI SNP Detail
Alliance Variant
Chr3:153206387 D3Mit294 208 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259463138
MGI SNP Detail
Alliance Variant
Chr3:153206406 D3Mit294 227 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224147916
MGI SNP Detail
Alliance Variant
Chr3:153206409 D3Mit294 230 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30635611
MGI SNP Detail
Alliance Variant
Chr3:153206459 D3Mit294 280 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262489506
MGI SNP Detail
Alliance Variant
Chr3:153206570 D3Mit294 391 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30635608
MGI SNP Detail
Alliance Variant
Chr3:153206574 D3Mit294 395 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A G A A A A A G G
rs238252379
MGI SNP Detail
Alliance Variant
Chr3:153206611 D3Mit294 432 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs30635605
MGI SNP Detail
Alliance Variant
Chr3:153206615 D3Mit294 436 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T T T T T T T A T T T T T T A
rs223727982
MGI SNP Detail
Alliance Variant
Chr3:153206624 D3Mit294 445 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250461982
MGI SNP Detail
Alliance Variant
Chr3:153206629 D3Mit294 450 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263836123
MGI SNP Detail
Alliance Variant
Chr3:153206655 D3Mit294 476 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232551652
MGI SNP Detail
Alliance Variant
Chr3:153206656 D3Mit294 477 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243788680
MGI SNP Detail
Alliance Variant
Chr3:153206680 D3Mit294 501 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255057406
MGI SNP Detail
Alliance Variant
Chr3:153206716 D3Mit294 537 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T
rs223937393
MGI SNP Detail
Alliance Variant
Chr3:153206739 D3Mit294 560 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242109766
MGI SNP Detail
Alliance Variant
Chr3:153206740 D3Mit294 561 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs217147963
MGI SNP Detail
Alliance Variant
Chr3:153206742 D3Mit294 563 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C G C C C C
rs233016735
MGI SNP Detail
Alliance Variant
Chr3:153206772 D3Mit294 593 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T T T T T T T T C T T T T T T T C T T C
rs258065639
MGI SNP Detail
Alliance Variant
Chr3:153206971 D3Mit294 792 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs215764461
MGI SNP Detail
Alliance Variant
Chr3:153207008 D3Mit294 829 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238972318
MGI SNP Detail
Alliance Variant
Chr3:153207055 D3Mit294 876 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs257019048
MGI SNP Detail
Alliance Variant
Chr3:153207095 D3Mit294 916 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213728595
MGI SNP Detail
Alliance Variant
Chr3:153207114 D3Mit294 935 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586360825
MGI SNP Detail
Alliance Variant
Chr3:153207133 D3Mit294 954 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230640591
MGI SNP Detail
Alliance Variant
Chr3:153207159 D3Mit294 980 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249807030
MGI SNP Detail
Alliance Variant
Chr3:153207182 D3Mit294 1003 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223605880
MGI SNP Detail
Alliance Variant
Chr3:153207196 D3Mit294 1017 bp distal
Rr587694 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs247844616
MGI SNP Detail
Alliance Variant
Chr3:153207198 D3Mit294 1019 bp distal
Rr587694 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263511759
MGI SNP Detail
Alliance Variant
Chr3:153207262 D3Mit294 1083 bp distal
Rr587694 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
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Showing SNP(s) 1 - 100 of 119

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/22/2025
MGI 6.24
The Jackson Laboratory

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