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Mouse SNP Summary
Symbol
Name
ID
D3Mit271
DNA segment, Chr 3, Massachusetts Institute of Technology 271
MGI:100564

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219701090
MGI SNP Detail
Alliance Variant
Chr3:30278070 D3Mit271 1910 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238724570
MGI SNP Detail
Alliance Variant
Chr3:30278084 D3Mit271 1896 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261689330
MGI SNP Detail
Alliance Variant
Chr3:30278098 D3Mit271 1882 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229554337
MGI SNP Detail
Alliance Variant
Chr3:30278114 D3Mit271 1866 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241974516
MGI SNP Detail
Alliance Variant
Chr3:30278115 D3Mit271 1865 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29814130
MGI SNP Detail
Alliance Variant
Chr3:30278125 D3Mit271 1855 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T T T T C T T C T T T
rs29814129
MGI SNP Detail
Alliance Variant
Chr3:30278156 D3Mit271 1824 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C T C C C C C C C
rs246164835
MGI SNP Detail
Alliance Variant
Chr3:30278157 D3Mit271 1823 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29814128
MGI SNP Detail
Alliance Variant
Chr3:30278189 D3Mit271 1791 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G A G G G G G G G G
rs225755379
MGI SNP Detail
Alliance Variant
Chr3:30278208 D3Mit271 1772 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256213183
MGI SNP Detail
Alliance Variant
Chr3:30278215 D3Mit271 1765 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs211966124
MGI SNP Detail
Alliance Variant
Chr3:30278225 D3Mit271 1755 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs237099434
MGI SNP Detail
Alliance Variant
Chr3:30278303 D3Mit271 1677 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254134348
MGI SNP Detail
Alliance Variant
Chr3:30278404 D3Mit271 1576 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217440611
MGI SNP Detail
Alliance Variant
Chr3:30278434 D3Mit271 1546 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232974190
MGI SNP Detail
Alliance Variant
Chr3:30278440 D3Mit271 1540 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252024576
MGI SNP Detail
Alliance Variant
Chr3:30278496 D3Mit271 1484 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219413833
MGI SNP Detail
Alliance Variant
Chr3:30278511 D3Mit271 1469 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232493946
MGI SNP Detail
Alliance Variant
Chr3:30278551 D3Mit271 1429 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs261184435
MGI SNP Detail
Alliance Variant
Chr3:30278757 D3Mit271 1223 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222046375
MGI SNP Detail
Alliance Variant
Chr3:30278761 D3Mit271 1219 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs250499877
MGI SNP Detail
Alliance Variant
Chr3:30278763 D3Mit271 1217 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs264537092
MGI SNP Detail
Alliance Variant
Chr3:30278776 D3Mit271 1204 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223273631
MGI SNP Detail
Alliance Variant
Chr3:30278865 D3Mit271 1115 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs240265659
MGI SNP Detail
Alliance Variant
Chr3:30278909 D3Mit271 1071 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51938212
MGI SNP Detail
Alliance Variant
Chr3:30278915 D3Mit271 1065 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T C C
rs47490042
MGI SNP Detail
Alliance Variant
Chr3:30278924 D3Mit271 1056 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/G C G G
rs29814127
MGI SNP Detail
Alliance Variant
Chr3:30278935 D3Mit271 1045 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G A G G G G G G
rs45751198
MGI SNP Detail
Alliance Variant
Chr3:30278959 D3Mit271 1021 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/C C A
rs50584997
MGI SNP Detail
Alliance Variant
Chr3:30278963 D3Mit271 1017 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G A
rs51748192
MGI SNP Detail
Alliance Variant
Chr3:30278964 D3Mit271 1016 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T C C
rs217206444
MGI SNP Detail
Alliance Variant
Chr3:30279024 D3Mit271 956 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T T T C T T T T T T C C T T T T T T T T C T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T
rs29814126
MGI SNP Detail
Alliance Variant
Chr3:30279044 D3Mit271 936 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C T C T T C T C C T
rs246118855
MGI SNP Detail
Alliance Variant
Chr3:30279053 D3Mit271 927 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213757594
MGI SNP Detail
Alliance Variant
Chr3:30279072 D3Mit271 908 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C T C C T T C T T T C C C C C C C C T C C C C T C C T C C C C C C T C C C T C T T C T C T C C C C C
rs239063071
MGI SNP Detail
Alliance Variant
Chr3:30279081 D3Mit271 899 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T T T T T T C C T C T T T T T T T T T T T C T T T C T T C T T T T T T C T T T T T T T T C T C T T T T C T
rs29814125
MGI SNP Detail
Alliance Variant
Chr3:30279086 D3Mit271 894 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G A G A A G A G G A
rs221566134
MGI SNP Detail
Alliance Variant
Chr3:30279096 D3Mit271 884 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239834532
MGI SNP Detail
Alliance Variant
Chr3:30279114 D3Mit271 866 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29814124
MGI SNP Detail
Alliance Variant
Chr3:30279166 D3Mit271 814 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T T T C T T C T T T
rs221231249
MGI SNP Detail
Alliance Variant
Chr3:30279261 D3Mit271 719 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs240328167
MGI SNP Detail
Alliance Variant
Chr3:30279268 D3Mit271 712 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs259674169
MGI SNP Detail
Alliance Variant
Chr3:30279270 D3Mit271 710 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G A A A A G A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A G A A G A A A A G A A A
rs219325316
MGI SNP Detail
Alliance Variant
Chr3:30279274 D3Mit271 706 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs246501853
MGI SNP Detail
Alliance Variant
Chr3:30279279 D3Mit271 701 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261220085
MGI SNP Detail
Alliance Variant
Chr3:30279315 D3Mit271 665 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs229219799
MGI SNP Detail
Alliance Variant
Chr3:30279339 D3Mit271 641 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247387611
MGI SNP Detail
Alliance Variant
Chr3:30279340 D3Mit271 640 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259764706
MGI SNP Detail
Alliance Variant
Chr3:30279346 D3Mit271 634 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226709235
MGI SNP Detail
Alliance Variant
Chr3:30279352 D3Mit271 628 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246177598
MGI SNP Detail
Alliance Variant
Chr3:30279376 D3Mit271 604 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583721556
MGI SNP Detail
Alliance Variant
Chr3:30279426 D3Mit271 554 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586126638
MGI SNP Detail
Alliance Variant
Chr3:30279432 D3Mit271 548 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580015188
MGI SNP Detail
Alliance Variant
Chr3:30279450 D3Mit271 530 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs47031532
MGI SNP Detail
Alliance Variant
Chr3:30279456 D3Mit271 524 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/T T T A
rs231028315
MGI SNP Detail
Alliance Variant
Chr3:30279535 D3Mit271 445 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252763728
MGI SNP Detail
Alliance Variant
Chr3:30279588 D3Mit271 392 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs212871717
MGI SNP Detail
Alliance Variant
Chr3:30279622 D3Mit271 358 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583423365
MGI SNP Detail
Alliance Variant
Chr3:30279658 D3Mit271 322 bp proximal
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242572039
MGI SNP Detail
Alliance Variant
Chr3:30279864 D3Mit271 116 bp proximal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29813213
MGI SNP Detail
Alliance Variant
Chr3:30279901 D3Mit271 79 bp proximal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G A A A A G A A A A A A A
rs215484278
MGI SNP Detail
Alliance Variant
Chr3:30279927 D3Mit271 53 bp proximal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235068962
MGI SNP Detail
Alliance Variant
Chr3:30279934 D3Mit271 46 bp proximal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs251424334
MGI SNP Detail
Alliance Variant
Chr3:30279956 D3Mit271 24 bp proximal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221847495
MGI SNP Detail
Alliance Variant
Chr3:30279965 D3Mit271 15 bp proximal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs243814869
MGI SNP Detail
Alliance Variant
Chr3:30280004 D3Mit271 within coordinates of
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260638461
MGI SNP Detail
Alliance Variant
Chr3:30280109 D3Mit271 25 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30557717
MGI SNP Detail
Alliance Variant
Chr3:30280133 D3Mit271 49 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C T T
rs250175852
MGI SNP Detail
Alliance Variant
Chr3:30280183 D3Mit271 99 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259834138
MGI SNP Detail
Alliance Variant
Chr3:30280210 D3Mit271 126 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs226774517
MGI SNP Detail
Alliance Variant
Chr3:30280224 D3Mit271 140 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239905036
MGI SNP Detail
Alliance Variant
Chr3:30280333 D3Mit271 249 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs255200790
MGI SNP Detail
Alliance Variant
Chr3:30280379 D3Mit271 295 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231403728
MGI SNP Detail
Alliance Variant
Chr3:30280418 D3Mit271 334 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29813212
MGI SNP Detail
Alliance Variant
Chr3:30280519 D3Mit271 435 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G A G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213388931
MGI SNP Detail
Alliance Variant
Chr3:30280570 D3Mit271 486 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233172260
MGI SNP Detail
Alliance Variant
Chr3:30280574 D3Mit271 490 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs249228238
MGI SNP Detail
Alliance Variant
Chr3:30280656 D3Mit271 572 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29813211
MGI SNP Detail
Alliance Variant
Chr3:30280662 D3Mit271 578 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/C A A A C A A A A A
rs29813210
MGI SNP Detail
Alliance Variant
Chr3:30280707 D3Mit271 623 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C T C C C
rs251482251
MGI SNP Detail
Alliance Variant
Chr3:30280718 D3Mit271 634 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29813209
MGI SNP Detail
Alliance Variant
Chr3:30280733 D3Mit271 649 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/C A A A A A A A A C A A A
rs580781937
MGI SNP Detail
Alliance Variant
Chr3:30280770 D3Mit271 686 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29813208
MGI SNP Detail
Alliance Variant
Chr3:30280779 D3Mit271 695 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G A G G G G G G
rs29813207
MGI SNP Detail
Alliance Variant
Chr3:30280858 D3Mit271 774 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G A G G A G A A G G G
rs220724809
MGI SNP Detail
Alliance Variant
Chr3:30280940 D3Mit271 856 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs240512775
MGI SNP Detail
Alliance Variant
Chr3:30281014 D3Mit271 930 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29813206
MGI SNP Detail
Alliance Variant
Chr3:30281029 D3Mit271 945 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP C/T C C C C C C T C C C C
rs220740614
MGI SNP Detail
Alliance Variant
Chr3:30281252 D3Mit271 1168 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP C/T C C C T C C C C C C T C C C C C C C C T C C C C C C C C T C C C C C C C C C T C C C C C C C C C C C T T
rs239969671
MGI SNP Detail
Alliance Variant
Chr3:30281344 D3Mit271 1260 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs223222884
MGI SNP Detail
Alliance Variant
Chr3:30281354 D3Mit271 1270 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244287122
MGI SNP Detail
Alliance Variant
Chr3:30281364 D3Mit271 1280 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262027979
MGI SNP Detail
Alliance Variant
Chr3:30281368 D3Mit271 1284 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C
rs29813205
MGI SNP Detail
Alliance Variant
Chr3:30281442 D3Mit271 1358 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP A/G A A A G A A A A A A
rs248895751
MGI SNP Detail
Alliance Variant
Chr3:30281457 D3Mit271 1373 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259128869
MGI SNP Detail
Alliance Variant
Chr3:30281479 D3Mit271 1395 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228320796
MGI SNP Detail
Alliance Variant
Chr3:30281495 D3Mit271 1411 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245325296
MGI SNP Detail
Alliance Variant
Chr3:30281507 D3Mit271 1423 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215533865
MGI SNP Detail
Alliance Variant
Chr3:30281535 D3Mit271 1451 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234941483
MGI SNP Detail
Alliance Variant
Chr3:30281616 D3Mit271 1532 bp distal
Gm38197 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574742 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 100 of 106

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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