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Mouse SNP Summary
Symbol
Name
ID
D2Mit373
DNA segment, Chr 2, Massachusetts Institute of Technology 373
MGI:100666

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257962340
MGI SNP Detail
Alliance Variant
Chr2:49821046 D2Mit373 1980 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs220767283
MGI SNP Detail
Alliance Variant
Chr2:49821054 D2Mit373 1972 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T
rs248295613
MGI SNP Detail
Alliance Variant
Chr2:49821065 D2Mit373 1961 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs107610105
MGI SNP Detail
Alliance Variant
Chr2:49821090 D2Mit373 1936 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G A
rs33486001
MGI SNP Detail
Alliance Variant
Chr2:49821096 D2Mit373 1930 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G A A A G
rs107670957
MGI SNP Detail
Alliance Variant
Chr2:49821102 D2Mit373 1924 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/C C C C A
rs256191210
MGI SNP Detail
Alliance Variant
Chr2:49821109 D2Mit373 1917 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226723838
MGI SNP Detail
Alliance Variant
Chr2:49821166 D2Mit373 1860 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs245294037
MGI SNP Detail
Alliance Variant
Chr2:49821177 D2Mit373 1849 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs27933550
MGI SNP Detail
Alliance Variant
Chr2:49821181 D2Mit373 1845 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP G/T T T T T T T G T T T T G T T G T
rs234392105
MGI SNP Detail
Alliance Variant
Chr2:49821212 D2Mit373 1814 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T
rs255094419
MGI SNP Detail
Alliance Variant
Chr2:49821236 D2Mit373 1790 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs218529073
MGI SNP Detail
Alliance Variant
Chr2:49821246 D2Mit373 1780 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27933549
MGI SNP Detail
Alliance Variant
Chr2:49821266 D2Mit373 1760 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T C C C C C C C C C C C C C
rs260587654
MGI SNP Detail
Alliance Variant
Chr2:49821267 D2Mit373 1759 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219912637
MGI SNP Detail
Alliance Variant
Chr2:49821355 D2Mit373 1671 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108641627
MGI SNP Detail
Alliance Variant
Chr2:49821445 D2Mit373 1581 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G A
rs251875780
MGI SNP Detail
Alliance Variant
Chr2:49821486 D2Mit373 1540 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220620990
MGI SNP Detail
Alliance Variant
Chr2:49821494 D2Mit373 1532 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27933548
MGI SNP Detail
Alliance Variant
Chr2:49821519 D2Mit373 1507 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G A G G G G G G A G
rs27933547
MGI SNP Detail
Alliance Variant
Chr2:49821539 D2Mit373 1487 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A G G G G G A G G G G A G G A G
rs220982019
MGI SNP Detail
Alliance Variant
Chr2:49821556 D2Mit373 1470 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242325969
MGI SNP Detail
Alliance Variant
Chr2:49821562 D2Mit373 1464 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50898549
MGI SNP Detail
Alliance Variant
Chr2:49821656 D2Mit373 1370 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G A
rs48738925
MGI SNP Detail
Alliance Variant
Chr2:49821677 D2Mit373 1349 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP G/T T G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs49517940
MGI SNP Detail
Alliance Variant
Chr2:49821695 D2Mit373 1331 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP G/T G T
rs51452916
MGI SNP Detail
Alliance Variant
Chr2:49821707 D2Mit373 1319 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C T
rs49199718
MGI SNP Detail
Alliance Variant
Chr2:49821834 D2Mit373 1192 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A G
rs260431497
MGI SNP Detail
Alliance Variant
Chr2:49821845 D2Mit373 1181 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs45885961
MGI SNP Detail
Alliance Variant
Chr2:49821847 D2Mit373 1179 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A G
rs46563924
MGI SNP Detail
Alliance Variant
Chr2:49821855 D2Mit373 1171 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G A A G
rs50148993
MGI SNP Detail
Alliance Variant
Chr2:49821863 D2Mit373 1163 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP G/T G T T G
rs49603986
MGI SNP Detail
Alliance Variant
Chr2:49821868 D2Mit373 1158 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T C
rs50791796
MGI SNP Detail
Alliance Variant
Chr2:49821950 D2Mit373 1076 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A G
rs50438104
MGI SNP Detail
Alliance Variant
Chr2:49821951 D2Mit373 1075 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G A A G
rs49110370
MGI SNP Detail
Alliance Variant
Chr2:49821957 D2Mit373 1069 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T C
rs587502827
MGI SNP Detail
Alliance Variant
Chr2:49821980 D2Mit373 1046 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs240188140
MGI SNP Detail
Alliance Variant
Chr2:49821982 D2Mit373 1044 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP G/T G G G T T T T T T T T T T T T T T T T G T T G T T T T G T G T T T T T T T T T G T T T T T T T G T T T T
rs263688122
MGI SNP Detail
Alliance Variant
Chr2:49821985 D2Mit373 1041 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A A G G G G G G G G G G G G G G G G A G G A G G G G A G A G G G G G G G G G A G G G G G G G A G G G G
rs48058650
MGI SNP Detail
Alliance Variant
Chr2:49822006 D2Mit373 1020 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A G
rs27933546
MGI SNP Detail
Alliance Variant
Chr2:49822022 D2Mit373 1004 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/T A A A A A A T T T A A T
rs52041015
MGI SNP Detail
Alliance Variant
Chr2:49822034 D2Mit373 992 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C T
rs46125154
MGI SNP Detail
Alliance Variant
Chr2:49822069 D2Mit373 957 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/T T T A
rs48270172
MGI SNP Detail
Alliance Variant
Chr2:49822078 D2Mit373 948 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/T T T A
rs27933545
MGI SNP Detail
Alliance Variant
Chr2:49822171 D2Mit373 855 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T C C C C C C C C C C C T C
rs260103330
MGI SNP Detail
Alliance Variant
Chr2:49822178 D2Mit373 848 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A A A A A A A G A A A A A A A G A A A A
rs27933544
MGI SNP Detail
Alliance Variant
Chr2:49822227 D2Mit373 799 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/G G C C C C C G C C C C C C G C
rs27933543
MGI SNP Detail
Alliance Variant
Chr2:49822272 D2Mit373 754 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C T T T T T C T T T T T T C T
rs27933542
MGI SNP Detail
Alliance Variant
Chr2:49822311 D2Mit373 715 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T T T T T T
rs229350900
MGI SNP Detail
Alliance Variant
Chr2:49822313 D2Mit373 713 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27933541
MGI SNP Detail
Alliance Variant
Chr2:49822348 D2Mit373 678 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C T T T T T T C T T T T T T C T
rs33708577
MGI SNP Detail
Alliance Variant
Chr2:49822367 D2Mit373 659 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/T T T A A A
rs27933540
MGI SNP Detail
Alliance Variant
Chr2:49822383 D2Mit373 643 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C T C C C C C C C C
rs27933539
MGI SNP Detail
Alliance Variant
Chr2:49822423 D2Mit373 603 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/G G G C C C C C C G C C C C C C G C
rs33656126
MGI SNP Detail
Alliance Variant
Chr2:49822473 D2Mit373 553 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A G G G
rs29565545
MGI SNP Detail
Alliance Variant
Chr2:49822484 D2Mit373 542 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G A A A
rs260174740
MGI SNP Detail
Alliance Variant
Chr2:49822491 D2Mit373 535 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs213069502
MGI SNP Detail
Alliance Variant
Chr2:49822514 D2Mit373 512 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs234519263
MGI SNP Detail
Alliance Variant
Chr2:49822518 D2Mit373 508 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252043917
MGI SNP Detail
Alliance Variant
Chr2:49822520 D2Mit373 506 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27933538
MGI SNP Detail
Alliance Variant
Chr2:49822524 D2Mit373 502 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G A A A G G G A
rs238969029
MGI SNP Detail
Alliance Variant
Chr2:49822611 D2Mit373 415 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A G G A A A A A G A A G A A A G A A A A A G A A A A A A G A A A A G G
rs253679264
MGI SNP Detail
Alliance Variant
Chr2:49822618 D2Mit373 408 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T C C T T T T T C T T C T T T C T T T T T C T T T T T T C T C T T C C
rs224409504
MGI SNP Detail
Alliance Variant
Chr2:49822619 D2Mit373 407 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251596897
MGI SNP Detail
Alliance Variant
Chr2:49822702 D2Mit373 324 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs581351713
MGI SNP Detail
Alliance Variant
Chr2:49822718 D2Mit373 308 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A T A A A A A A A A A A A A
rs27933537
MGI SNP Detail
Alliance Variant
Chr2:49822728 D2Mit373 298 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T T T T T C T C C C T T
rs27933536
MGI SNP Detail
Alliance Variant
Chr2:49822730 D2Mit373 296 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G A
rs387731521
MGI SNP Detail
Alliance Variant
Chr2:49822732 D2Mit373 294 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A G A A A G A A G A G G A A A G A A A A A G G A A A A A G A A A A G G
rs27933535
MGI SNP Detail
Alliance Variant
Chr2:49822845 D2Mit373 181 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T T T T T T T C C C T T C C
rs27933534
MGI SNP Detail
Alliance Variant
Chr2:49822860 D2Mit373 166 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T T T T T T T C C C T T C C
rs256761915
MGI SNP Detail
Alliance Variant
Chr2:49822968 D2Mit373 58 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C T C C C T C C T C T T C C C T C C C C C T T C C C C C T C C C C T T
rs225699587
MGI SNP Detail
Alliance Variant
Chr2:49823007 D2Mit373 19 bp proximal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27933533
MGI SNP Detail
Alliance Variant
Chr2:49823111 D2Mit373 within coordinates of
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A G A
rs215747718
MGI SNP Detail
Alliance Variant
Chr2:49823138 D2Mit373 within coordinates of
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233678745
MGI SNP Detail
Alliance Variant
Chr2:49823187 D2Mit373 39 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258977518
MGI SNP Detail
Alliance Variant
Chr2:49823233 D2Mit373 85 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212561909
MGI SNP Detail
Alliance Variant
Chr2:49823245 D2Mit373 97 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229811836
MGI SNP Detail
Alliance Variant
Chr2:49823259 D2Mit373 111 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245567555
MGI SNP Detail
Alliance Variant
Chr2:49823272 D2Mit373 124 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47847193
MGI SNP Detail
Alliance Variant
Chr2:49823332 D2Mit373 184 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A G G
rs234743539
MGI SNP Detail
Alliance Variant
Chr2:49823348 D2Mit373 200 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259576996
MGI SNP Detail
Alliance Variant
Chr2:49823388 D2Mit373 240 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs224269092
MGI SNP Detail
Alliance Variant
Chr2:49823402 D2Mit373 254 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240361775
MGI SNP Detail
Alliance Variant
Chr2:49823412 D2Mit373 264 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263857301
MGI SNP Detail
Alliance Variant
Chr2:49823450 D2Mit373 302 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs221749849
MGI SNP Detail
Alliance Variant
Chr2:49823477 D2Mit373 329 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236156486
MGI SNP Detail
Alliance Variant
Chr2:49823481 D2Mit373 333 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256617276
MGI SNP Detail
Alliance Variant
Chr2:49823489 D2Mit373 341 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219722109
MGI SNP Detail
Alliance Variant
Chr2:49823504 D2Mit373 356 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240388033
MGI SNP Detail
Alliance Variant
Chr2:49823531 D2Mit373 383 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263349342
MGI SNP Detail
Alliance Variant
Chr2:49823532 D2Mit373 384 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234608014
MGI SNP Detail
Alliance Variant
Chr2:49823548 D2Mit373 400 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27933532
MGI SNP Detail
Alliance Variant
Chr2:49823572 D2Mit373 424 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C T C
rs264803102
MGI SNP Detail
Alliance Variant
Chr2:49823580 D2Mit373 432 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27933531
MGI SNP Detail
Alliance Variant
Chr2:49823636 D2Mit373 488 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/T A A A A A A T A A A A A A A
rs27933530
MGI SNP Detail
Alliance Variant
Chr2:49823653 D2Mit373 505 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A A A A A G A A A A A A A
rs27933529
MGI SNP Detail
Alliance Variant
Chr2:49823660 D2Mit373 512 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G G G G G G G G A G G G G G
rs213523449
MGI SNP Detail
Alliance Variant
Chr2:49823681 D2Mit373 533 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234781794
MGI SNP Detail
Alliance Variant
Chr2:49823694 D2Mit373 546 bp distal
Lypd6b Intron
Lypd6b Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
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Showing SNP(s) 1 - 100 of 144

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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