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Mouse SNP Summary
Symbol
Name
ID
D16Mit161
DNA segment, Chr 16, Massachusetts Institute of Technology 161
MGI:100920

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245286796
MGI SNP Detail
Alliance Variant
Chr16:10378350 Clec16a Intron
D16Mit161 1953 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265737093
MGI SNP Detail
Alliance Variant
Chr16:10378388 Clec16a Intron
D16Mit161 1915 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50695348
MGI SNP Detail
Alliance Variant
Chr16:10378406 Clec16a Intron
D16Mit161 1897 bp proximal
SNP C/G G G G G G G G G G G G G G C G
rs243097896
MGI SNP Detail
Alliance Variant
Chr16:10378432 Clec16a Intron
D16Mit161 1871 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256411561
MGI SNP Detail
Alliance Variant
Chr16:10378476 Clec16a Intron
D16Mit161 1827 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs225228556
MGI SNP Detail
Alliance Variant
Chr16:10378527 Clec16a Intron
D16Mit161 1776 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255669317
MGI SNP Detail
Alliance Variant
Chr16:10378532 Clec16a Intron
D16Mit161 1771 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262642292
MGI SNP Detail
Alliance Variant
Chr16:10378556 Clec16a Intron
D16Mit161 1747 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231873944
MGI SNP Detail
Alliance Variant
Chr16:10378585 Clec16a Intron
D16Mit161 1718 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252770979
MGI SNP Detail
Alliance Variant
Chr16:10378637 Clec16a Intron
D16Mit161 1666 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216388968
MGI SNP Detail
Alliance Variant
Chr16:10378700 Clec16a Intron
D16Mit161 1603 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs234884948
MGI SNP Detail
Alliance Variant
Chr16:10378728 Clec16a Intron
D16Mit161 1575 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs242280480
MGI SNP Detail
Alliance Variant
Chr16:10378865 Clec16a Intron
D16Mit161 1438 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs212909890
MGI SNP Detail
Alliance Variant
Chr16:10378908 Clec16a Intron
D16Mit161 1395 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs236015559
MGI SNP Detail
Alliance Variant
Chr16:10378909 Clec16a Intron
D16Mit161 1394 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs48953078
MGI SNP Detail
Alliance Variant
Chr16:10378936 Clec16a Intron
D16Mit161 1367 bp proximal
SNP A/C C C C C C C A C C C A C C C
rs223592287
MGI SNP Detail
Alliance Variant
Chr16:10378985 Clec16a Intron
D16Mit161 1318 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240212106
MGI SNP Detail
Alliance Variant
Chr16:10379005 Clec16a Intron
D16Mit161 1298 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253792142
MGI SNP Detail
Alliance Variant
Chr16:10379037 Clec16a Intron
D16Mit161 1266 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222736474
MGI SNP Detail
Alliance Variant
Chr16:10379236 Clec16a Intron
D16Mit161 1067 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50033859
MGI SNP Detail
Alliance Variant
Chr16:10379402 Clec16a Intron
D16Mit161 901 bp proximal
SNP C/T T T T T T T T T T T T T T C T
rs47263210
MGI SNP Detail
Alliance Variant
Chr16:10379410 Clec16a Intron
D16Mit161 893 bp proximal
SNP A/G G G G G G G A G G G A G G G G
rs51982626
MGI SNP Detail
Alliance Variant
Chr16:10379554 Clec16a Intron
D16Mit161 749 bp proximal
SNP A/T A A A A A A A A A A A A A T A
rs243417387
MGI SNP Detail
Alliance Variant
Chr16:10379600 Clec16a Intron
D16Mit161 703 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs265366833
MGI SNP Detail
Alliance Variant
Chr16:10379872 Clec16a Intron
D16Mit161 431 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C T C C C T C C C C C C T C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580608268
MGI SNP Detail
Alliance Variant
Chr16:10379997 Clec16a Intron
D16Mit161 306 bp proximal
SNP C/T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C
rs584054629
MGI SNP Detail
Alliance Variant
Chr16:10379998 Clec16a Intron
D16Mit161 305 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C
rs578534591
MGI SNP Detail
Alliance Variant
Chr16:10380001 Clec16a Intron
D16Mit161 302 bp proximal
SNP C/T C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C
rs585325350
MGI SNP Detail
Alliance Variant
Chr16:10380012 Clec16a Intron
D16Mit161 291 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578916848
MGI SNP Detail
Alliance Variant
Chr16:10380016 Clec16a Intron
D16Mit161 287 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C
rs582409673
MGI SNP Detail
Alliance Variant
Chr16:10380020 Clec16a Intron
D16Mit161 283 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C
rs585617376
MGI SNP Detail
Alliance Variant
Chr16:10380024 Clec16a Intron
D16Mit161 279 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C
rs578703376
MGI SNP Detail
Alliance Variant
Chr16:10380032 Clec16a Intron
D16Mit161 271 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs231423522
MGI SNP Detail
Alliance Variant
Chr16:10380152 Clec16a Intron
D16Mit161 151 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs248618893
MGI SNP Detail
Alliance Variant
Chr16:10380170 Clec16a Intron
D16Mit161 133 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A
rs258773226
MGI SNP Detail
Alliance Variant
Chr16:10380696 Clec16a Intron
D16Mit161 274 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C
rs228934243
MGI SNP Detail
Alliance Variant
Chr16:10380704 Clec16a Intron
D16Mit161 282 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A
rs46499835
MGI SNP Detail
Alliance Variant
Chr16:10380793 Clec16a Intron
D16Mit161 371 bp distal
SNP G/T T T T T T T G T T T G T T G T
rs212823488
MGI SNP Detail
Alliance Variant
Chr16:10380859 Clec16a Intron
D16Mit161 437 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230191811
MGI SNP Detail
Alliance Variant
Chr16:10380901 Clec16a Intron
D16Mit161 479 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251358023
MGI SNP Detail
Alliance Variant
Chr16:10380950 Clec16a Intron
D16Mit161 528 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49303920
MGI SNP Detail
Alliance Variant
Chr16:10380958 Clec16a Intron
D16Mit161 536 bp distal
SNP C/T C C C C C C T C C C T C C T C
rs47040284
MGI SNP Detail
Alliance Variant
Chr16:10380965 Clec16a Intron
D16Mit161 543 bp distal
SNP A/G G G G G G G A G G G A G G G G
rs47447112
MGI SNP Detail
Alliance Variant
Chr16:10381130 Clec16a Coding-Synonymous
Clec16a mRNA-UTR
D16Mit161 708 bp distal
SNP A/G G G G G G A A A G G A G G A G
rs47731829
MGI SNP Detail
Alliance Variant
Chr16:10381153 Clec16a Intron
Clec16a mRNA-UTR
D16Mit161 731 bp distal
SNP A/G G G G G G G A G G G A G G A G
rs236414152
MGI SNP Detail
Alliance Variant
Chr16:10381178 Clec16a Intron
Clec16a mRNA-UTR
D16Mit161 756 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs45710437
MGI SNP Detail
Alliance Variant
Chr16:10381186 Clec16a Intron
Clec16a mRNA-UTR
D16Mit161 764 bp distal
SNP C/T C C C C C C T C C C T C C C C
rs222073501
MGI SNP Detail
Alliance Variant
Chr16:10381197 Clec16a Intron
Clec16a mRNA-UTR
D16Mit161 775 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246417598
MGI SNP Detail
Alliance Variant
Chr16:10381213 Clec16a Intron
Clec16a mRNA-UTR
D16Mit161 791 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs45636507
MGI SNP Detail
Alliance Variant
Chr16:10381248 Clec16a Intron
Clec16a mRNA-UTR
D16Mit161 826 bp distal
SNP G/T G G G G G G G G G G T G G T G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs52066478
MGI SNP Detail
Alliance Variant
Chr16:10381274 Clec16a Intron
Clec16a mRNA-UTR
D16Mit161 852 bp distal
SNP C/T C C C C C C C C C C T C C T C
rs240356718
MGI SNP Detail
Alliance Variant
Chr16:10381282 Clec16a Intron
Clec16a mRNA-UTR
D16Mit161 860 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs48908204
MGI SNP Detail
Alliance Variant
Chr16:10381365 Clec16a Intron
D16Mit161 943 bp distal
SNP G/T T T T T T T G T T T G T T T T
rs229035464
MGI SNP Detail
Alliance Variant
Chr16:10381402 Clec16a Intron
D16Mit161 980 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs235562080
MGI SNP Detail
Alliance Variant
Chr16:10381425 Clec16a Intron
D16Mit161 1003 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582330677
MGI SNP Detail
Alliance Variant
Chr16:10381477 Clec16a Intron
D16Mit161 1055 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254348377
MGI SNP Detail
Alliance Variant
Chr16:10381505 Clec16a Intron
D16Mit161 1083 bp distal
SNP A/G A A A A A A A A A A G G A A A A A A A G G A G G G A A G A G A A A G A A A A A A G A A A A A A A G A A A G
rs229481465
MGI SNP Detail
Alliance Variant
Chr16:10381529 Clec16a Intron
D16Mit161 1107 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs256223855
MGI SNP Detail
Alliance Variant
Chr16:10381548 Clec16a Intron
D16Mit161 1126 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs215754875
MGI SNP Detail
Alliance Variant
Chr16:10381554 Clec16a Intron
D16Mit161 1132 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs48062741
MGI SNP Detail
Alliance Variant
Chr16:10381770 Clec16a Intron
D16Mit161 1348 bp distal
SNP G/T G G G G G G T G G G T G G T G
rs585531524
MGI SNP Detail
Alliance Variant
Chr16:10381773 Clec16a Intron
D16Mit161 1351 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs51244490
MGI SNP Detail
Alliance Variant
Chr16:10381789 Clec16a Intron
D16Mit161 1367 bp distal
SNP C/T C C C C C C T C C C T C C T C
rs232933922
MGI SNP Detail
Alliance Variant
Chr16:10381856 Clec16a Intron
D16Mit161 1434 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs47016909
MGI SNP Detail
Alliance Variant
Chr16:10381860 Clec16a Intron
D16Mit161 1438 bp distal
SNP A/G G G G G G G A G G G A G G A G
rs216805879
MGI SNP Detail
Alliance Variant
Chr16:10381865 Clec16a Intron
D16Mit161 1443 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs47714931
MGI SNP Detail
Alliance Variant
Chr16:10381929 Clec16a Intron
D16Mit161 1507 bp distal
SNP A/G G G G G G G A G G G A G G G
rs583987349
MGI SNP Detail
Alliance Variant
Chr16:10381962 Clec16a Intron
D16Mit161 1540 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G
rs51744861
MGI SNP Detail
Alliance Variant
Chr16:10382329 Clec16a Intron
D16Mit161 1907 bp distal
SNP A/G G G G G G G A G G A G G A G
rs580027753
MGI SNP Detail
Alliance Variant
Chr16:10382353 Clec16a Intron
D16Mit161 1931 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583507131
MGI SNP Detail
Alliance Variant
Chr16:10382386 Clec16a Intron
D16Mit161 1964 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G A G G G G G G G G G G G G A G G G G G G G A G G G
rs249658631
MGI SNP Detail
Alliance Variant
Chr16:10382406 Clec16a Intron
D16Mit161 1984 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs48029692
MGI SNP Detail
Alliance Variant
Chr16:10382409 Clec16a Intron
D16Mit161 1987 bp distal
SNP A/G A G
rs236312970
MGI SNP Detail
Alliance Variant
Chr16:10382418 Clec16a Intron
D16Mit161 1996 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 74 of 74

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory