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Mouse SNP Summary
Symbol
Name
ID 		D6Jpk2
DNA segment, Chr 6, Japan, Kominami 2
MGI:104948

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Showing SNP(s) 1 - 56 of 56

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580481060
MGI SNP Detail		 Chr6:125394855 D6Jpk2 113 bp proximal
Gm66368 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258167394
MGI SNP Detail		 Chr6:125394888 D6Jpk2 80 bp proximal
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs583929222
MGI SNP Detail		 Chr6:125394960 D6Jpk2 8 bp proximal
Gm66368 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587476112
MGI SNP Detail		 Chr6:125394978 D6Jpk2 within coordinates of
Gm66368 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs30463245
MGI SNP Detail		 Chr6:125395035 D6Jpk2 within coordinates of
Gm66368 within coordinates of
 SNP A/C C A A
rs30656686
MGI SNP Detail		 Chr6:125395038 D6Jpk2 within coordinates of
Gm66368 within coordinates of
 SNP A/C C A A
rs222497071
MGI SNP Detail		 Chr6:125395056 D6Jpk2 within coordinates of
Gm66368 within coordinates of
 SNP A/C C C C C C C C C C C C C A C A C A C C C C A C
rs580102155
MGI SNP Detail		 Chr6:125395059 D6Jpk2 within coordinates of
Gm66368 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583703037
MGI SNP Detail		 Chr6:125395062 D6Jpk2 within coordinates of
Gm66368 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586531479
MGI SNP Detail		 Chr6:125395081 D6Jpk2 within coordinates of
Gm66368 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs242447611
MGI SNP Detail		 Chr6:125395082 D6Jpk2 within coordinates of
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581157905
MGI SNP Detail		 Chr6:125395253 D6Jpk2 158 bp distal
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586857568
MGI SNP Detail		 Chr6:125395259 D6Jpk2 164 bp distal
Gm66368 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs30118132
MGI SNP Detail		 Chr6:125395285 D6Jpk2 190 bp distal
Gm66368 within coordinates of
 SNP C/T C T T
rs580808187
MGI SNP Detail		 Chr6:125395322 D6Jpk2 227 bp distal
Gm66368 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G T G G G G G G G G G G G G
rs30267577
MGI SNP Detail		 Chr6:125395323 D6Jpk2 228 bp distal
Gm66368 within coordinates of
 SNP A/G A G G G A
rs585162932
MGI SNP Detail		 Chr6:125395366 D6Jpk2 271 bp distal
Gm66368 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C A C C C C C C C A C C C C
rs579306163
MGI SNP Detail		 Chr6:125395421 D6Jpk2 326 bp distal
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G
rs582228508
MGI SNP Detail		 Chr6:125395450 D6Jpk2 355 bp distal
Gm66368 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs242491242
MGI SNP Detail		 Chr6:125395536 D6Jpk2 441 bp distal
Gm66368 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584955353
MGI SNP Detail		 Chr6:125395583 D6Jpk2 488 bp distal
Gm66368 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30367121
MGI SNP Detail		 Chr6:125395609 D6Jpk2 514 bp distal
Gm66368 within coordinates of
 SNP A/C C A C A
rs262642593
MGI SNP Detail		 Chr6:125395640 D6Jpk2 545 bp distal
Gm66368 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230087168
MGI SNP Detail		 Chr6:125395715 D6Jpk2 620 bp distal
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578683434
MGI SNP Detail		 Chr6:125395795 D6Jpk2 700 bp distal
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582300900
MGI SNP Detail		 Chr6:125395812 D6Jpk2 717 bp distal
Gm66368 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585466444
MGI SNP Detail		 Chr6:125395815 D6Jpk2 720 bp distal
Gm66368 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs249734288
MGI SNP Detail		 Chr6:125395816 D6Jpk2 721 bp distal
Gm66368 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs212082921
MGI SNP Detail		 Chr6:125395872 D6Jpk2 777 bp distal
Gm66368 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229197770
MGI SNP Detail		 Chr6:125395940 D6Jpk2 845 bp distal
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582005365
MGI SNP Detail		 Chr6:125395965 D6Jpk2 870 bp distal
Gm66368 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A A T A A A A A A A A A A A A
rs246810196
MGI SNP Detail		 Chr6:125396013 D6Jpk2 918 bp distal
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215990130
MGI SNP Detail		 Chr6:125396018 D6Jpk2 923 bp distal
Gm66368 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs237916450
MGI SNP Detail		 Chr6:125396084 D6Jpk2 989 bp distal
Gm66368 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262549430
MGI SNP Detail		 Chr6:125396132 D6Jpk2 1037 bp distal
Gm66368 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586267715
MGI SNP Detail		 Chr6:125396189 D6Jpk2 1094 bp distal
Gm66368 within coordinates of
 SNP C C C C C C C C C C C C C C C
rs580655323
MGI SNP Detail		 Chr6:125396192 D6Jpk2 1097 bp distal
Gm66368 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C
rs587309267
MGI SNP Detail		 Chr6:125396285 D6Jpk2 1190 bp distal
Gm66368 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579759399
MGI SNP Detail		 Chr6:125396310 D6Jpk2 1215 bp distal
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs213951158
MGI SNP Detail		 Chr6:125396345 D6Jpk2 1250 bp distal
Gm66368 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs583270272
MGI SNP Detail		 Chr6:125396403 D6Jpk2 1308 bp distal
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs237481764
MGI SNP Detail		 Chr6:125396451 D6Jpk2 1356 bp distal
Gm66368 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249874177
MGI SNP Detail		 Chr6:125396454 D6Jpk2 1359 bp distal
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223845593
MGI SNP Detail		 Chr6:125396563 D6Jpk2 1468 bp distal
Gm66368 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235937702
MGI SNP Detail		 Chr6:125396576 D6Jpk2 1481 bp distal
Gm66368 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs253912500
MGI SNP Detail		 Chr6:125396579 D6Jpk2 1484 bp distal
Gm66368 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224791112
MGI SNP Detail		 Chr6:125396695 D6Jpk2 1600 bp distal
Gm66368 within coordinates of
Gm66372 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs244737078
MGI SNP Detail		 Chr6:125396739 D6Jpk2 1644 bp distal
Gm66368 within coordinates of
Gm66372 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T
rs265229691
MGI SNP Detail		 Chr6:125396810 D6Jpk2 1715 bp distal
Gm66368 within coordinates of
Gm66372 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222329819
MGI SNP Detail		 Chr6:125396812 D6Jpk2 1717 bp distal
Gm66368 within coordinates of
Gm66372 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236598380
MGI SNP Detail		 Chr6:125396865 D6Jpk2 1770 bp distal
Gm66368 within coordinates of
Gm66372 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253788642
MGI SNP Detail		 Chr6:125396880 D6Jpk2 1785 bp distal
Gm66368 within coordinates of
Gm66372 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs229246181
MGI SNP Detail		 Chr6:125396924 D6Jpk2 1829 bp distal
Gm66368 within coordinates of
Gm66372 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs246686967
MGI SNP Detail		 Chr6:125396989 D6Jpk2 1894 bp distal
Gm66368 within coordinates of
Gm66372 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258017498
MGI SNP Detail		 Chr6:125396990 D6Jpk2 1895 bp distal
Gm66368 within coordinates of
Gm66372 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs232252314
MGI SNP Detail		 Chr6:125397011 D6Jpk2 1916 bp distal
Gm66368 within coordinates of
Gm66372 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
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Showing SNP(s) 1 - 56 of 56
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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