About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		D2Tfv11
DNA segment, Chr 2, Thomas F. Vogt 11
MGI:109223

<< first < prev1 next > last >>
Showing SNP(s) 1 - 31 of 31

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216880540
MGI SNP Detail
Alliance Variant		 Chr2:74528105 Cpgi11799 within coordinates of
D2Tfv11 1908 bp proximal
Hoxd9 mRNA-UTR
Igs15 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236012804
MGI SNP Detail
Alliance Variant		 Chr2:74528109 Cpgi11799 within coordinates of
D2Tfv11 1904 bp proximal
Hoxd9 mRNA-UTR
Igs15 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250167938
MGI SNP Detail
Alliance Variant		 Chr2:74528343 Cpgi11799 within coordinates of
D2Tfv11 1670 bp proximal
Hoxd9 mRNA-UTR
Igs15 within coordinates of
Tssr18418 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A T A A A T A A A A A A A A A A A
rs217690173
MGI SNP Detail
Alliance Variant		 Chr2:74528501 Cpgi11799 within coordinates of
D2Tfv11 1512 bp proximal
Hoxd9 Coding-Synonymous
Igs15 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs236622237
MGI SNP Detail
Alliance Variant		 Chr2:74528682 Cpgi11799 within coordinates of
D2Tfv11 1331 bp proximal
Hoxd9 Coding-Synonymous
Igs15 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs252627334
MGI SNP Detail
Alliance Variant		 Chr2:74528744 Cpgi11799 within coordinates of
D2Tfv11 1269 bp proximal
Hoxd9 Coding-Synonymous
Igs15 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580642114
MGI SNP Detail
Alliance Variant		 Chr2:74529012 Cpgi11799 within coordinates of
D2Tfv11 1001 bp proximal
Hoxd9 Coding-NonSynonymous
Igs15 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226522776
MGI SNP Detail
Alliance Variant		 Chr2:74529014 Cpgi11799 within coordinates of
D2Tfv11 999 bp proximal
Hoxd9 Coding-Synonymous
Igs15 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247637473
MGI SNP Detail
Alliance Variant		 Chr2:74529120 Cpgi11799 within coordinates of
D2Tfv11 893 bp proximal
Hoxd9 Coding-NonSynonymous
Igs15 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T C T T T C T T T T T T T C T T T
rs263520225
MGI SNP Detail
Alliance Variant		 Chr2:74529654 Cpgi11799 within coordinates of
D2Tfv11 359 bp proximal
Hoxd9 Coding-Synonymous
Igs15 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C T C C C T C C C C C C C C C C C C
rs233311375
MGI SNP Detail
Alliance Variant		 Chr2:74529989 D2Tfv11 24 bp proximal
Hoxd9 mRNA-UTR
Igs15 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs243392944
MGI SNP Detail
Alliance Variant		 Chr2:74529998 D2Tfv11 15 bp proximal
Hoxd9 mRNA-UTR
Igs15 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258364134
MGI SNP Detail
Alliance Variant		 Chr2:74530070 D2Tfv11 within coordinates of
Hoxd9 mRNA-UTR
Igs15 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs224288953
MGI SNP Detail
Alliance Variant		 Chr2:74530187 D2Tfv11 within coordinates of
Hoxd9 mRNA-UTR
Igs15 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G T G G G T G G G G G G G T G G G G
rs244592476
MGI SNP Detail
Alliance Variant		 Chr2:74530215 D2Tfv11 15 bp distal
Hoxd9 mRNA-UTR
Igs15 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs51664529
MGI SNP Detail
Alliance Variant		 Chr2:74530301 D2Tfv11 101 bp distal
Hoxd9 mRNA-UTR
Igs15 within coordinates of
 SNP C/G G C
rs234257865
MGI SNP Detail
Alliance Variant		 Chr2:74530337 D2Tfv11 137 bp distal
Hoxd9 mRNA-UTR
Igs15 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257600297
MGI SNP Detail
Alliance Variant		 Chr2:74530473 D2Tfv11 273 bp distal
Hoxd9 mRNA-UTR
Igs15 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217168053
MGI SNP Detail		 Chr2:74530627 D2Tfv11 427 bp distal
Igs15 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237733434
MGI SNP Detail		 Chr2:74530692 D2Tfv11 492 bp distal
Igs15 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244369609
MGI SNP Detail		 Chr2:74530739 D2Tfv11 539 bp distal
Igs15 within coordinates of
Rr559359 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211716117
MGI SNP Detail		 Chr2:74530817 D2Tfv11 617 bp distal
Igs15 within coordinates of
Rr559359 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230437537
MGI SNP Detail		 Chr2:74530833 D2Tfv11 633 bp distal
Igs15 within coordinates of
Rr559359 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C T C C C T C C C C C C C T C C C C
rs252405230
MGI SNP Detail		 Chr2:74530954 D2Tfv11 754 bp distal
Igs15 within coordinates of
Rr559359 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227093028
MGI SNP Detail		 Chr2:74531184 D2Tfv11 984 bp distal
Igs15 within coordinates of
Rr559359 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237903137
MGI SNP Detail		 Chr2:74531590 D2Tfv11 1390 bp distal
Gm75671 within coordinates of
Igs15 within coordinates of
Rr559360 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs263269653
MGI SNP Detail		 Chr2:74531714 D2Tfv11 1514 bp distal
Gm75671 within coordinates of
Igs15 within coordinates of
Rr559360 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A G A A A G A A A A A A A G A A A A
rs222456720
MGI SNP Detail		 Chr2:74531772 D2Tfv11 1572 bp distal
Gm75671 within coordinates of
Igs15 within coordinates of
Rr559360 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239024933
MGI SNP Detail		 Chr2:74531784 D2Tfv11 1584 bp distal
Gm75671 within coordinates of
Igs15 within coordinates of
Rr559360 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258522244
MGI SNP Detail		 Chr2:74531928 D2Tfv11 1728 bp distal
Gm75671 within coordinates of
Igs15 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C T C C C T C C C C C C C C C C C C
rs218188817
MGI SNP Detail		 Chr2:74532171 D2Tfv11 1971 bp distal
Gm75671 within coordinates of
Igs15 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 31 of 31
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory