Lancl1 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Lancl1
LanC (bacterial lantibiotic synthetase component C)-like 1
MGI:1336997

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Showing SNP(s) 1 - 100 of 595

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs30342059 MGI SNP Detail	Chr1:67037720	Lancl1 1956 bp downstream	SNP	A/C						C		C												A														C		C						C
rs50136410 MGI SNP Detail	Chr1:67037726	Lancl1 1950 bp downstream	SNP	A				A	A																				A						A																			A
rs51675861 MGI SNP Detail	Chr1:67037740	Lancl1 1936 bp downstream	SNP	C				C	C																				C						C																			C
rs47755832 MGI SNP Detail	Chr1:67037767	Lancl1 1909 bp downstream	SNP	T				T	T																				T						T																			T
rs50903528 MGI SNP Detail	Chr1:67037774	Lancl1 1902 bp downstream	SNP	A				A	A																				A						A																			A
rs30342062 MGI SNP Detail	Chr1:67037849	Lancl1 1827 bp downstream	SNP	A/G				G	G	G		A												G					G						G			A								A								G
rs47061694 MGI SNP Detail	Chr1:67037876	Lancl1 1800 bp downstream	SNP	G					G																				G						G																			G
rs30342815 MGI SNP Detail	Chr1:67037885	Lancl1 1791 bp downstream	SNP	G/T						G		G												T														G		G						G
rs30342818 MGI SNP Detail	Chr1:67037904	Lancl1 1772 bp downstream	SNP	A/G					G	G		A												A					G						G			A		A						A								G
rs30342821 MGI SNP Detail	Chr1:67037946	Lancl1 1730 bp downstream	SNP	A/C		C			C	C		C				C								A					C									C		C						C												C
rs51951631 MGI SNP Detail	Chr1:67037974	Lancl1 1702 bp downstream	SNP	C					C																				C						C																			C
rs46298345 MGI SNP Detail	Chr1:67038002	Lancl1 1674 bp downstream	SNP	A					A																				A						A																			A
rs50385576 MGI SNP Detail	Chr1:67038006	Lancl1 1670 bp downstream	SNP	A					A																				A						A																			A
rs30335744 MGI SNP Detail	Chr1:67038128	Lancl1 1548 bp downstream	SNP	C/T						C		C												C														C								T
rs30335747 MGI SNP Detail	Chr1:67038153	Lancl1 1523 bp downstream	SNP	G/T					G	G		G												T														G		G						G
rs30335750 MGI SNP Detail	Chr1:67038158	Lancl1 1518 bp downstream	SNP	C/T					C	C		C												C					T						C			C		C						T								T				C
rs30335752 MGI SNP Detail	Chr1:67038330	Lancl1 1346 bp downstream	SNP	C/T				C	C	C		T												C					C						C			T								T								C				C
rs30336565 MGI SNP Detail	Chr1:67038454	Lancl1 1222 bp downstream	SNP	G/T				G	G	G		T												G					G						G			G		T						G								G				G
rs45699726 MGI SNP Detail	Chr1:67038468	Lancl1 1208 bp downstream	SNP	A				A	A																				A						A																			A
rs30336568 MGI SNP Detail	Chr1:67038486	Lancl1 1190 bp downstream	SNP	A/C					A	A		A												A														A		A						C
rs30336571 MGI SNP Detail	Chr1:67038568	Lancl1 1108 bp downstream	SNP	A/G						G		G												G														G		G						A												G
rs30337394 MGI SNP Detail	Chr1:67038606	Lancl1 1070 bp downstream	SNP	A/G				G	G	G		A												A					G						G			A		A						A								G
rs30337397 MGI SNP Detail	Chr1:67038636	Lancl1 1040 bp downstream	SNP	A/G				G	G	G		A												A					G						G			A		A						A								G				G
rs30337399 MGI SNP Detail	Chr1:67038664	Lancl1 1012 bp downstream	SNP	C/G						C		C												C														C								G
rs30337401 MGI SNP Detail	Chr1:67038666	Lancl1 1010 bp downstream	SNP	G/T				T	T	T		G												G					T						T			G		G						G								T				T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs30337403 MGI SNP Detail	Chr1:67038731	Lancl1 945 bp downstream	SNP	C/T				T	T	T		C												T					T						T			C		C						C								T
rs30338535 MGI SNP Detail	Chr1:67038754	Lancl1 922 bp downstream	SNP	C/T		C			C	C		C												C					C									T		C						T												C
rs30338538 MGI SNP Detail	Chr1:67038833	Lancl1 843 bp downstream	SNP	A/C				C	C	C		A												A					C						C			A		A						A								C
rs30338541 MGI SNP Detail	Chr1:67038859	Lancl1 817 bp downstream	SNP	A/C				C	C	C		A												A					C						C			A		A						A								C
rs30339514 MGI SNP Detail	Chr1:67038889	Lancl1 787 bp downstream	SNP	A/G				A	A	A		G												G					A						G			G		G						G								A
rs48617557 MGI SNP Detail	Chr1:67038904	Lancl1 772 bp downstream	SNP	A/C				C	C																				C						A																			C
rs51522065 MGI SNP Detail	Chr1:67038918	Lancl1 758 bp downstream	SNP	T				T	T																				T
rs51179642 MGI SNP Detail	Chr1:67038931	Lancl1 745 bp downstream	SNP	A				A	A																				A
rs30339517 MGI SNP Detail	Chr1:67038934	Lancl1 742 bp downstream	SNP	A/G								G																										A		G						G
rs32042936 MGI SNP Detail	Chr1:67039140	Lancl1 536 bp downstream	SNP	C/T		T		T	C																				T
rs30339520 MGI SNP Detail	Chr1:67039153	Lancl1 523 bp downstream	SNP	A/T					A	A		A																										A		A						T
rs30565498 MGI SNP Detail	Chr1:67039167	Lancl1 509 bp downstream	SNP	C/T		T		T	C										T										T						C																			T
rs30339523 MGI SNP Detail	Chr1:67039168	Lancl1 508 bp downstream	SNP	G/T						T		T												G														T		T						T
rs30340266 MGI SNP Detail	Chr1:67039296	Lancl1 380 bp downstream	SNP	C/T						C		C												C														C		C						T
rs33860824 MGI SNP Detail	Chr1:67039345	Lancl1 331 bp downstream	SNP	A/G		A		A	A										G										A						A																			A
rs30340269 MGI SNP Detail	Chr1:67039539	Lancl1 137 bp downstream	SNP	C/G		C		C	C	C		G							G					G					C						C			G		G						G								C
rs30340272 MGI SNP Detail	Chr1:67039547	Lancl1 129 bp downstream	SNP	A/G								G												A														G		G						G
rs30341015 MGI SNP Detail	Chr1:67039598	Lancl1 78 bp downstream	SNP	C/T					C	C		C												T														C		C						C
rs30341018 MGI SNP Detail	Chr1:67039643	Lancl1 33 bp downstream	SNP	A/G				G	G	G		A							A					G					G						G			G		A						G								G				G
rs48736877 MGI SNP Detail Alliance Variant	Chr1:67039722	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	T				T	T																				T						T																			T
rs30341021 MGI SNP Detail Alliance Variant	Chr1:67039824	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	A/G						A		A												A														A		G						A
rs30341764 MGI SNP Detail Alliance Variant	Chr1:67039837	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	C/T				C	C	C		T							T					C					C						C			C		T						C								C
rs32405533 MGI SNP Detail Alliance Variant	Chr1:67039858	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	C/T				T	T										C										T						T																			T
rs30341767 MGI SNP Detail Alliance Variant	Chr1:67039869	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	C/G						C		G																	C						C			G								C								C
rs30341770 MGI SNP Detail Alliance Variant	Chr1:67039921	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	C/T		C				T		C												C														C		C						C												C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs30341773 MGI SNP Detail Alliance Variant	Chr1:67039970	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	A/C				C	C	C		A																	C						C			A		A						C								C				C
rs30342796 MGI SNP Detail Alliance Variant	Chr1:67039999	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	A/C						A		A												C														A		A						A
rs30342799 MGI SNP Detail Alliance Variant	Chr1:67040059	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	A/G						G		G												A														G		G						G												G
rs30342802 MGI SNP Detail Alliance Variant	Chr1:67040156	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	A/G				A	A	A		G												A					A						A			G		G						G								A				A
rs30343655 MGI SNP Detail Alliance Variant	Chr1:67040185	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	C/T				T	T	T		C												T					T						T			C		C						C								T
rs48402594 MGI SNP Detail Alliance Variant	Chr1:67040202	Lancl1 mRNA-UTR Rr412496 within coordinates of	SNP	A				A	A																				A						A																			A
rs49146046 MGI SNP Detail Alliance Variant	Chr1:67040245	Lancl1 mRNA-UTR	SNP	T				T	T																				T						T																			T
rs30343658 MGI SNP Detail Alliance Variant	Chr1:67040251	Lancl1 mRNA-UTR	SNP	C/T				C	C	C		T												T					C						C			T								T								C
rs30336246 MGI SNP Detail Alliance Variant	Chr1:67040270	Lancl1 mRNA-UTR	SNP	C/T						C		C												T														C		C						C												C
rs49334438 MGI SNP Detail Alliance Variant	Chr1:67040412	Lancl1 mRNA-UTR	SNP	C				C	C																				C
rs30615628 MGI SNP Detail Alliance Variant	Chr1:67040415	Lancl1 mRNA-UTR	SNP	A/G		A		A	G																				A
rs45660162 MGI SNP Detail Alliance Variant	Chr1:67040418	Lancl1 mRNA-UTR	SNP	G				G	G																				G
rs47984890 MGI SNP Detail Alliance Variant	Chr1:67040419	Lancl1 mRNA-UTR	SNP	A					A																				A
rs48027698 MGI SNP Detail Alliance Variant	Chr1:67040439	Lancl1 mRNA-UTR	SNP	C				C	C																				C						C																			C
rs49869599 MGI SNP Detail Alliance Variant	Chr1:67040539	Lancl1 mRNA-UTR	SNP	C					C																				C						C																			C
rs48833869 MGI SNP Detail Alliance Variant	Chr1:67040540	Lancl1 mRNA-UTR	SNP	C					C																				C						C																			C
rs30336249 MGI SNP Detail Alliance Variant	Chr1:67040580	Lancl1 mRNA-UTR	SNP	C/T		T		T	T	T		C							C					C					T						T			C		C						C								T
rs30336252 MGI SNP Detail Alliance Variant	Chr1:67040641	Lancl1 mRNA-UTR	SNP	A/G		G			G	G		G												G														A		G						G												G
rs30337045 MGI SNP Detail Alliance Variant	Chr1:67040694	Lancl1 mRNA-UTR	SNP	A/G				G	G	G		A							A										G						G			A		A						G								G
rs30337048 MGI SNP Detail Alliance Variant	Chr1:67040698	Lancl1 mRNA-UTR	SNP	C/T						C		C												T														C		C						C
rs30337051 MGI SNP Detail Alliance Variant	Chr1:67040727	Lancl1 mRNA-UTR	SNP	A/G					G	G		A												A					A						G			A		A						A								A				A
rs30337864 MGI SNP Detail Alliance Variant	Chr1:67040794	Lancl1 mRNA-UTR	SNP	A/G				G	G	G		A							A										G						G			G		A						G								G
rs30337867 MGI SNP Detail Alliance Variant	Chr1:67040919	Lancl1 mRNA-UTR	SNP	C/T				C	C	C		T							T					C					C						C			T		T						C								C				C
rs32729651 MGI SNP Detail Alliance Variant	Chr1:67040950	Lancl1 mRNA-UTR	SNP	C/T					T										C										T
rs31550890 MGI SNP Detail Alliance Variant	Chr1:67040955	Lancl1 mRNA-UTR	SNP	A/G				G	A										G										G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs30337870 MGI SNP Detail Alliance Variant	Chr1:67041002	Lancl1 mRNA-UTR	SNP	C/T		C			C	C		C				C								T					C									C		C						C												C
rs30337873 MGI SNP Detail Alliance Variant	Chr1:67041104	Lancl1 mRNA-UTR	SNP	G/T					T	T		T												G														T		T						T												T
rs30338696 MGI SNP Detail Alliance Variant	Chr1:67041193	Lancl1 mRNA-UTR	SNP	A/G						G		G												A														G		G						G												G
rs246198933 MGI SNP Detail Alliance Variant	Chr1:67041230	Lancl1 mRNA-UTR	SNP	C																															C																			C
rs256963680 MGI SNP Detail Alliance Variant	Chr1:67041244	Lancl1 mRNA-UTR	SNP	C																															C																			C
rs224443531 MGI SNP Detail Alliance Variant	Chr1:67041268	Lancl1 mRNA-UTR	SNP	G																															G																			G
rs249060811 MGI SNP Detail Alliance Variant	Chr1:67041286	Lancl1 mRNA-UTR	SNP	C																															C																			C
rs260932518 MGI SNP Detail Alliance Variant	Chr1:67041289	Lancl1 mRNA-UTR	SNP	G																															G																			G
rs30338699 MGI SNP Detail Alliance Variant	Chr1:67041294	Lancl1 mRNA-UTR	SNP	C/T								C												C														T		C						C
rs233610660 MGI SNP Detail Alliance Variant	Chr1:67041330	Lancl1 mRNA-UTR	SNP	A/T																															T																			A
rs251941676 MGI SNP Detail Alliance Variant	Chr1:67041356	Lancl1 mRNA-UTR	SNP	A																															A																			A
rs30338702 MGI SNP Detail Alliance Variant	Chr1:67041365	Lancl1 mRNA-UTR	SNP	A/G						G		A												A											G			A		A						A								A				A
rs30339595 MGI SNP Detail Alliance Variant	Chr1:67041415	Lancl1 mRNA-UTR Rr412497 within coordinates of	SNP	A/C					A	A		C												C											A			C		C						C								C				A
rs30339597 MGI SNP Detail Alliance Variant	Chr1:67041432	Lancl1 mRNA-UTR Rr412497 within coordinates of	SNP	C/T					T	T		C												T														C		C						C
rs48738331 MGI SNP Detail Alliance Variant	Chr1:67041498	Lancl1 mRNA-UTR Rr412497 within coordinates of	SNP	G					G																				G						G																			G
rs48327741 MGI SNP Detail Alliance Variant	Chr1:67041696	Lancl1 mRNA-UTR Rr412497 within coordinates of	SNP	C				C	C																				C						C																			C
rs30339600 MGI SNP Detail Alliance Variant	Chr1:67041727	Lancl1 mRNA-UTR Rr412497 within coordinates of	SNP	G/T				G	G	G		T												T					G						G			T								T								G
rs30339603 MGI SNP Detail Alliance Variant	Chr1:67041767	Lancl1 mRNA-UTR	SNP	A/G				G	G	G		A												A					G						G			A		A						A								G				G
rs30340475 MGI SNP Detail Alliance Variant	Chr1:67041771	Lancl1 mRNA-UTR	SNP	A/G						G		G												G														A		G						G												G
rs30340477 MGI SNP Detail Alliance Variant	Chr1:67041891	Lancl1 mRNA-UTR	SNP	C/G						C		C												G														C								C
rs30340479 MGI SNP Detail Alliance Variant	Chr1:67042030	Lancl1 mRNA-UTR	SNP	A/T								T												A														T		T						T
rs47116126 MGI SNP Detail Alliance Variant	Chr1:67042040	Lancl1 mRNA-UTR	SNP	A				A	A																				A						A																			A
rs48006524 MGI SNP Detail Alliance Variant	Chr1:67042098	Lancl1 mRNA-UTR	SNP	C				C																					C
rs30340481 MGI SNP Detail Alliance Variant	Chr1:67042112	Lancl1 mRNA-UTR	SNP	C/T						T		T												C														C		T						C
rs49925638 MGI SNP Detail Alliance Variant	Chr1:67042124	Lancl1 mRNA-UTR	SNP	A/T				A																					A						A																			T

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