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Mouse SNP Summary
Symbol
Name
ID 		Stag3
STAG3 cohesin complex component
MGI:1355311

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs38019300
MGI SNP Detail		 Chr5:138276536 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1966 bp upstream
 SNP A/C A A A A A A A A C A A C A A
rs244312132
MGI SNP Detail		 Chr5:138276660 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1842 bp upstream
 SNP A/G A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G G G A A A A G A A A A
rs37819210
MGI SNP Detail		 Chr5:138276720 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1782 bp upstream
 SNP A/G G G G G G G G G G G A G G A G
rs232568845
MGI SNP Detail		 Chr5:138276967 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1535 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs246554099
MGI SNP Detail		 Chr5:138277033 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1469 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs259745119
MGI SNP Detail		 Chr5:138277081 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1421 bp upstream
 SNP A/G A A A A A A A A A G A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A G G G A A A A A A A A A
rs223441396
MGI SNP Detail		 Chr5:138277114 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1388 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs243093109
MGI SNP Detail		 Chr5:138277189 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1313 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213342908
MGI SNP Detail		 Chr5:138277210 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1292 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs238734758
MGI SNP Detail		 Chr5:138277272 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1230 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252035609
MGI SNP Detail		 Chr5:138277299 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1203 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49157450
MGI SNP Detail		 Chr5:138277344 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1158 bp upstream
 SNP C/G C G
rs216874097
MGI SNP Detail		 Chr5:138277351 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1151 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239283074
MGI SNP Detail		 Chr5:138277358 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 1144 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254669160
MGI SNP Detail		 Chr5:138277503 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 999 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223714831
MGI SNP Detail		 Chr5:138277567 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 935 bp upstream
 SNP A/T A A A A A A A A A T A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A T T T A A A A T A A A A
rs37505234
MGI SNP Detail		 Chr5:138277571 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 931 bp upstream
 SNP A/T T T T T T T T T T A A T T A T
rs250855384
MGI SNP Detail		 Chr5:138277581 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 921 bp upstream
 SNP A/G A A A A A A A A A G A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A G G G A A A A G A A A A
rs38970231
MGI SNP Detail		 Chr5:138277644 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 858 bp upstream
 SNP A/G G G G G G G G G G G A A G G G G
rs222621216
MGI SNP Detail		 Chr5:138277687 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 815 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36914010
MGI SNP Detail		 Chr5:138277820 Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 682 bp upstream
 SNP A/G A A A A A A G A A G A A G A
rs263225385
MGI SNP Detail		 Chr5:138278013 Cpgi16862 within coordinates of
Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 489 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs225377535
MGI SNP Detail		 Chr5:138278079 Cpgi16862 within coordinates of
Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 423 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs241001045
MGI SNP Detail		 Chr5:138278134 Cpgi16862 within coordinates of
Gm43720 within coordinates of
Gpc2 within coordinates of
Rr124618 within coordinates of
Stag3 368 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259728854
MGI SNP Detail		 Chr5:138278287 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Rr399448 within coordinates of
Stag3 215 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223430565
MGI SNP Detail		 Chr5:138278338 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Rr399448 within coordinates of
Stag3 164 bp upstream
 SNP A/G A A A A A A A A A G A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G G G G A A A A G A A A A
rs243034968
MGI SNP Detail		 Chr5:138278388 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Rr399448 within coordinates of
Stag3 114 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265072868
MGI SNP Detail		 Chr5:138278413 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Rr399448 within coordinates of
Stag3 89 bp upstream
 SNP A/G A A A A A A A A A G A A A A A A G G A A A A A A A G A A A A A G G G A G G G G A A G A G G
rs230896113
MGI SNP Detail		 Chr5:138278487 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Rr399448 within coordinates of
Stag3 15 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256795045
MGI SNP Detail		 Chr5:138278499 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Rr399448 within coordinates of
Stag3 3 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216307377
MGI SNP Detail		 Chr5:138278583 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235311626
MGI SNP Detail		 Chr5:138278595 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36485761
MGI SNP Detail		 Chr5:138278622 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP C/T T T T T T T C T T C T T C C
rs217675163
MGI SNP Detail		 Chr5:138278658 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33623855
MGI SNP Detail		 Chr5:138278684 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP A/C C A C A A C C C C A C A C C
rs37131568
MGI SNP Detail		 Chr5:138278690 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP C/G C C C C C C G C C C C C C C
rs214595321
MGI SNP Detail		 Chr5:138278691 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237423968
MGI SNP Detail		 Chr5:138278720 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs262916197
MGI SNP Detail		 Chr5:138278732 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs225092006
MGI SNP Detail		 Chr5:138278755 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
Tssr49443 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240991307
MGI SNP Detail		 Chr5:138278799 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
Tssr49444 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253375947
MGI SNP Detail		 Chr5:138278820 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
Tssr49445 within coordinates of
 SNP A/G A A A A A A A A A G A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G G G G A A A A G A A A A
rs217836224
MGI SNP Detail		 Chr5:138278840 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs236536804
MGI SNP Detail		 Chr5:138278843 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP A/C C C C C C C C C C A C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A A A A C C C C A C C C C
rs262317527
MGI SNP Detail		 Chr5:138278875 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231095839
MGI SNP Detail		 Chr5:138278991 Cpgi16862 within coordinates of
Rr124618 within coordinates of
Stag3 within coordinates of
 SNP C/T C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T T T C C C C C C C C C
rs245211778
MGI SNP Detail		 Chr5:138279041 Stag3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579721748
MGI SNP Detail		 Chr5:138279081 Stag3 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs583533330
MGI SNP Detail		 Chr5:138279082 Stag3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586168155
MGI SNP Detail		 Chr5:138279113 Stag3 within coordinates of
 SNP C/T C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T T C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265629042
MGI SNP Detail		 Chr5:138279119 Stag3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs228384114
MGI SNP Detail		 Chr5:138279121 Stag3 within coordinates of
 SNP A/G A A A A A A A A A G A A A A A A A A A A A A G A A A A G A A A A A A A A A A A G G G G A A A A A A A A A
rs248549788
MGI SNP Detail		 Chr5:138279186 Stag3 within coordinates of
 SNP C/G/T G G G G G G G G G C G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G C C C G G G G C G G G G
rs211805768
MGI SNP Detail		 Chr5:138279229 Stag3 within coordinates of
 SNP C/T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C C C T T T T C T T T T
rs580679457
MGI SNP Detail		 Chr5:138279243 Stag3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36784897
MGI SNP Detail		 Chr5:138279375 Stag3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C T
rs254480186
MGI SNP Detail		 Chr5:138279496 Stag3 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214146357
MGI SNP Detail		 Chr5:138279503 Stag3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs37181709
MGI SNP Detail		 Chr5:138279520 Stag3 within coordinates of
 SNP A/T A A A A A A A A A T A A A
rs259044010
MGI SNP Detail		 Chr5:138279603 Stag3 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584112885
MGI SNP Detail		 Chr5:138279604 Stag3 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217238575
MGI SNP Detail		 Chr5:138279610 Stag3 within coordinates of
 SNP A/T A A A A A A A A A T A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T T T T A A A A A A A A
rs587455770
MGI SNP Detail		 Chr5:138279627 Stag3 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581610005
MGI SNP Detail		 Chr5:138279638 Stag3 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234457350
MGI SNP Detail		 Chr5:138279645 Stag3 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584803272
MGI SNP Detail		 Chr5:138279672 Stag3 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs253273750
MGI SNP Detail		 Chr5:138279721 Stag3 within coordinates of
 SNP A/T A A A A A A A A A T A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T T T T A A A A A A A A A
rs37009487
MGI SNP Detail		 Chr5:138279750 Stag3 within coordinates of
 SNP C/T C C C C C C C C C T C C T C
rs236883005
MGI SNP Detail		 Chr5:138279800 Stag3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261918720
MGI SNP Detail		 Chr5:138279862 Stag3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223297973
MGI SNP Detail		 Chr5:138279889 Stag3 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247749710
MGI SNP Detail		 Chr5:138280077 Stag3 within coordinates of
 SNP C/T T T T T T T T T T C T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C C C C T T T T T T T T T
rs263573882
MGI SNP Detail		 Chr5:138280123 Stag3 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs37490501
MGI SNP Detail		 Chr5:138280136 Stag3 within coordinates of
 SNP A/C C C C C C C C C C A C C A C
rs242425145
MGI SNP Detail		 Chr5:138280160 Stag3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255733382
MGI SNP Detail		 Chr5:138280196 Stag3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224718698
MGI SNP Detail		 Chr5:138280267 Stag3 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs250528917
MGI SNP Detail		 Chr5:138280390 Stag3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214513101
MGI SNP Detail		 Chr5:138280392 Stag3 within coordinates of
 SNP A/G G G G G G G G G G A G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A A A A G G G G A G G G G
rs231200627
MGI SNP Detail		 Chr5:138280403 Stag3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257699612
MGI SNP Detail		 Chr5:138280488 Stag3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216249385
MGI SNP Detail		 Chr5:138280509 Stag3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234764607
MGI SNP Detail		 Chr5:138280535 Stag3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247477548
MGI SNP Detail		 Chr5:138280578 Stag3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36789470
MGI SNP Detail		 Chr5:138280589 Stag3 within coordinates of
 SNP A/G G G G G G G G G G A G G A G
rs237406411
MGI SNP Detail		 Chr5:138280605 Stag3 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257292941
MGI SNP Detail		 Chr5:138280638 Stag3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45964767
MGI SNP Detail		 Chr5:138280808 Stag3 within coordinates of
 SNP A/G A A A G
rs237721825
MGI SNP Detail		 Chr5:138280875 Stag3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263284358
MGI SNP Detail		 Chr5:138280899 Stag3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222597510
MGI SNP Detail		 Chr5:138280986 Stag3 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs242739284
MGI SNP Detail		 Chr5:138281023 Stag3 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255723420
MGI SNP Detail		 Chr5:138281044 Stag3 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs218608114
MGI SNP Detail		 Chr5:138281072 Stag3 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46474945
MGI SNP Detail		 Chr5:138281103 Stag3 within coordinates of
 SNP A/T T T A
rs50886947
MGI SNP Detail		 Chr5:138281168 Stag3 within coordinates of
 SNP C/T C C T
rs231887894
MGI SNP Detail		 Chr5:138281331 Stag3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252522711
MGI SNP Detail		 Chr5:138281440 Stag3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258408003
MGI SNP Detail		 Chr5:138281479 Stag3 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A T A A A A
rs228802258
MGI SNP Detail		 Chr5:138281576 Stag3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C C C T T C T T T T
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Showing SNP(s) 1 - 100 of 690
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/17/2024
MGI 6.24 		The Jackson Laboratory