Ska2 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Ska2
spindle and kinetochore associated complex subunit 2
MGI:1913390

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Showing SNP(s) 1 - 60 of 60

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3<tf>/J	C3H/HeJ	C57BL/6J	CAST/EiJ	CZECHII/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29435253 MGI SNP Detail Alliance Variant	Chr11:86998543	Prr11 Intron Ska2 1544 bp upstream	SNP	A/G	G	A	G					A			G
rs27032017 MGI SNP Detail Alliance Variant	Chr11:86998650	Prr11 Intron Ska2 1437 bp upstream	SNP	C/T	T	C	T	T	C			C				C	C		C	C	T	C
rs29401662 MGI SNP Detail Alliance Variant	Chr11:86998916	Prr11 Intron Ska2 1171 bp upstream	SNP	C/T	T	C	T					C			T			T					C
rs27032016 MGI SNP Detail	Chr11:86999627	Cpgi3483 within coordinates of Rr369312 within coordinates of Rr453747 within coordinates of Ska2 460 bp upstream	SNP	A/G	A	G	A	A	G	A	A	G	G		A	G	A		G	G	A	G
rs27032015 MGI SNP Detail	Chr11:86999986	Cpgi3483 within coordinates of Rr453747 within coordinates of Ska2 101 bp upstream	SNP	C/T	C		C	C	C	C	C		T		C	C	C		T	C	C	T		C
rs237116430 MGI SNP Detail	Chr11:87000016	Cpgi3483 within coordinates of Rr453747 within coordinates of Ska2 71 bp upstream Tssr103905 within coordinates of	SNP	A/T														T					A
rs27032014 MGI SNP Detail Alliance Variant	Chr11:87000258	Cpgi3483 within coordinates of Rr453747 within coordinates of Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T	T		T	T	T	T	T		C		T	T	T		C	T	T	C		T
rs27032013 MGI SNP Detail Alliance Variant	Chr11:87000335	Cpgi3483 within coordinates of Rr453747 within coordinates of Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/T	T		T	T	T	T	T		A		T	T	T		A	T	T	A		T
rs27032012 MGI SNP Detail Alliance Variant	Chr11:87000389	Cpgi3483 within coordinates of Gm73625 within coordinates of Rr453748 within coordinates of Ska2 Intron Ska2 Noncoding-Transcript-Variant Tssr103908 within coordinates of	SNP	C/G	C		C	C	C	C	C		G		C	C	C		G	C	C	G		C
rs252763814 MGI SNP Detail Alliance Variant	Chr11:87000568	Cpgi3483 within coordinates of Gm73625 within coordinates of Rr453748 within coordinates of Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														T					C
rs212818150 MGI SNP Detail Alliance Variant	Chr11:87000582	Cpgi3483 within coordinates of Gm73625 within coordinates of Rr453748 within coordinates of Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G														G					A
rs234304449 MGI SNP Detail Alliance Variant	Chr11:87000645	Cpgi3483 within coordinates of Gm73625 within coordinates of Rr453748 within coordinates of Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/G														G					C
rs27032011 MGI SNP Detail Alliance Variant	Chr11:87000775	Cpgi3483 within coordinates of Gm73625 within coordinates of Rr453748 within coordinates of Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T	T		T	T	T	T	T		C		T	T	T		C	T	T	C
rs253054936 MGI SNP Detail Alliance Variant	Chr11:87000924	Cpgi3483 within coordinates of Gm73625 within coordinates of Rr453748 within coordinates of Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/G														G					C
rs27032010 MGI SNP Detail Alliance Variant	Chr11:87001150	Rr453748 within coordinates of Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T	C		C	C	C	C	C				C	C	C	T	T	C	C	T	C	C
rs240680141 MGI SNP Detail Alliance Variant	Chr11:87001219	Rr453748 within coordinates of Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/C														C					A
rs256907112 MGI SNP Detail Alliance Variant	Chr11:87001370	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G														A					G
rs27032009 MGI SNP Detail Alliance Variant	Chr11:87001478	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G	A		A	A		A					A	A			G		A	G
rs27032008 MGI SNP Detail Alliance Variant	Chr11:87001668	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	G/T	G		G	G	G	G	G		T		G	G	G	T	T	G	G	T	G	G
rs240761813 MGI SNP Detail Alliance Variant	Chr11:87001739	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														C					T
rs256488550 MGI SNP Detail Alliance Variant	Chr11:87001823	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														T					C
rs27032007 MGI SNP Detail Alliance Variant	Chr11:87002464	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T	T		T	T	T	T	T		C		T	T	T	C	C	T	T	C	T	T
rs242399632 MGI SNP Detail Alliance Variant	Chr11:87002917	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/T														A					T
rs261468177 MGI SNP Detail Alliance Variant	Chr11:87003056	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G														G					A
rs227686230 MGI SNP Detail Alliance Variant	Chr11:87003087	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														C					T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3<tf>/J	C3H/HeJ	C57BL/6J	CAST/EiJ	CZECHII/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs258466021 MGI SNP Detail Alliance Variant	Chr11:87003132	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G														A					G
rs6177475 MGI SNP Detail Alliance Variant	Chr11:87003909	Mir301 within coordinates of Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G	G		G	G	G	G	G	G	A	A	G	G	G		A	G	G	A		G
rs262440642 MGI SNP Detail Alliance Variant	Chr11:87004048	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														T					C
rs6178089 MGI SNP Detail Alliance Variant	Chr11:87004077	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	G/T								G		T
rs6178091 MGI SNP Detail Alliance Variant	Chr11:87004081	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T								C		T
rs6178100 MGI SNP Detail Alliance Variant	Chr11:87004090	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T								C		T
rs6178115 MGI SNP Detail Alliance Variant	Chr11:87004101	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	G/T								G		T
rs231379626 MGI SNP Detail Alliance Variant	Chr11:87004104	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G														A					G
rs6178560 MGI SNP Detail Alliance Variant	Chr11:87004160	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T								T		C
rs6178611 MGI SNP Detail Alliance Variant	Chr11:87004188	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/C								C		A				A					C
rs6178995 MGI SNP Detail Alliance Variant	Chr11:87004216	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/T								T		A
rs6179116 MGI SNP Detail Alliance Variant	Chr11:87004304	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T								T		C
rs6192041 MGI SNP Detail Alliance Variant	Chr11:87004343	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T								C		T
rs212979672 MGI SNP Detail Alliance Variant	Chr11:87004538	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														C					T
rs234265398 MGI SNP Detail Alliance Variant	Chr11:87004548	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/T														A					T
rs247441023 MGI SNP Detail Alliance Variant	Chr11:87004800	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/C														C					A
rs215066011 MGI SNP Detail Alliance Variant	Chr11:87005000	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G														A					G
rs238596963 MGI SNP Detail Alliance Variant	Chr11:87005167	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														T					C
rs261948898 MGI SNP Detail Alliance Variant	Chr11:87005345	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/G														C					G
rs27032006 MGI SNP Detail Alliance Variant	Chr11:87005397	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/T	A		A	A	A		A				A	A	A			A	T			A
rs223100254 MGI SNP Detail Alliance Variant	Chr11:87005640	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/G														G					C
rs236000972 MGI SNP Detail Alliance Variant	Chr11:87005815	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/T														T					A
rs250093543 MGI SNP Detail Alliance Variant	Chr11:87005897	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G														A					G
rs222370955 MGI SNP Detail Alliance Variant	Chr11:87006620	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/G														G					C
rs242363254 MGI SNP Detail Alliance Variant	Chr11:87006650	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G														A					G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3<tf>/J	C3H/HeJ	C57BL/6J	CAST/EiJ	CZECHII/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs261593329 MGI SNP Detail Alliance Variant	Chr11:87006788	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														T					C
rs224673140 MGI SNP Detail Alliance Variant	Chr11:87006819	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G														A					G
rs246685888 MGI SNP Detail Alliance Variant	Chr11:87007709	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G														G					A
rs265149576 MGI SNP Detail Alliance Variant	Chr11:87008728	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														T					C
rs231033942 MGI SNP Detail Alliance Variant	Chr11:87008734	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	A/G														A					G
rs242511290 MGI SNP Detail Alliance Variant	Chr11:87008773	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														C					T
rs254674852 MGI SNP Detail Alliance Variant	Chr11:87009324	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														T					C
rs228593758 MGI SNP Detail Alliance Variant	Chr11:87011451	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/G														G					C
rs247404168 MGI SNP Detail Alliance Variant	Chr11:87011537	Ska2 Intron Ska2 Noncoding-Transcript-Variant	SNP	C/T														T					C
rs29447821 MGI SNP Detail Alliance Variant	Chr11:87013445	Gm11491 within coordinates of Ska2 Intron Ska2 mRNA-UTR Ska2 Noncoding-Transcript-Variant	SNP	A/T	T	A	T					A			T

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