Symbol Name ID |
Sox5os3
SRY (sex determining region Y)-box 5, opposite strand 3 MGI:1914010 |
Loading... |
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129S1/SvImJ
|
129X1/SvJ
|
A/J
|
AKR/J
|
BALB/cByJ
|
BTBR T<+> Itpr3<tf>/J
|
C3H/HeJ
|
C57BL/6J
|
CAST/EiJ
|
CZECHII/EiJ
|
DBA/2J
|
FVB/NJ
|
KK/HlJ
|
LG/J
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NZW/LacJ
|
PWD/PhJ
|
SM/J
|
WSB/EiJ
|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs216042962 MGI SNP Detail |
Chr6:144616685 | Rr139297 Sox5 Sox5it Sox5os3 |
SNP | A/G | A | G | ||||||||||||||||||
rs37027498 MGI SNP Detail |
Chr6:144616690 | Rr139297 Sox5 Sox5it Sox5os3 |
SNP | A/G | G | G | A | G | A | A | A | A | A | G | G | |||||||||
rs36889544 MGI SNP Detail |
Chr6:144616819 | Sox5 Sox5it Sox5os3 |
SNP | A/G | G | G | A | G | A | A | A | A | G | G | G | G | ||||||||
rs213524227 MGI SNP Detail |
Chr6:144616938 | Sox5 Sox5it Sox5os3 |
SNP | G/T | T | G | ||||||||||||||||||
rs37333532 MGI SNP Detail |
Chr6:144616978 | Sox5 Sox5it Sox5os3 |
SNP | A/G | A | A | G | A | A | G | G | A | A | A | ||||||||||
rs38805147 MGI SNP Detail |
Chr6:144617061 | Rr139298 Sox5 Sox5it Sox5os3 |
SNP | A/G | A | A | G | A | G | G | G | A | A | |||||||||||
rs260845973 MGI SNP Detail |
Chr6:144617246 | Sox5 Sox5it Sox5os3 |
SNP | A/T | T | A | ||||||||||||||||||
rs37276532 MGI SNP Detail |
Chr6:144617268 | Sox5 Sox5it Sox5os3 |
SNP | C/G | C | C | G | C | G | G | G | G | G | C | G | C | ||||||||
rs241644865 MGI SNP Detail |
Chr6:144617354 | Sox5 Sox5it Sox5os3 |
SNP | A/G | A | G | ||||||||||||||||||
rs37363183 MGI SNP Detail |
Chr6:144617476 | Sox5 Sox5it Sox5os3 |
SNP | C/T | C | C | T | C | T | T | T | T | C | T | ||||||||||
rs253406420 MGI SNP Detail |
Chr6:144617477 | Sox5 Sox5it Sox5os3 |
SNP | A/G | G | A | ||||||||||||||||||
rs220853720 MGI SNP Detail |
Chr6:144617488 | Sox5 Sox5it Sox5os3 |
SNP | C/T | C | T | ||||||||||||||||||
rs239466506 MGI SNP Detail |
Chr6:144617527 | Sox5 Sox5it Sox5os3 |
SNP | A/G | G | A | ||||||||||||||||||
rs31004751 MGI SNP Detail |
Chr6:144617694 | Sox5 Sox5it Sox5os3 |
SNP | C/T | T | T | T | C | T | C | T | C | C | C | C | T | C | T | T | |||||
rs30474215 MGI SNP Detail |
Chr6:144617707 | Sox5 Sox5it Sox5os3 |
SNP | C/T | T | T | T | C | T | C | T | C | C | C | C | T | C | T | T | |||||
rs30117362 MGI SNP Detail |
Chr6:144617770 | Sox5 Sox5it Sox5os3 |
SNP | C/T | C | C | C | T | C | T | C | T | T | T | C | C | C | C | ||||||
rs30852356 MGI SNP Detail |
Chr6:144617793 | Sox5 Sox5it Sox5os3 |
SNP | C/T | C | C | C | T | C | T | C | T | T | T | T | C | T | C | ||||||
rs30940766 MGI SNP Detail |
Chr6:144617855 | Sox5 Sox5it Sox5os3 |
SNP | G/T | T | T | T | G | T | G | T | G | G | G | G | T | G | G | ||||||
rs30267459 MGI SNP Detail |
Chr6:144617987 | Sox5 Sox5it Sox5os3 |
SNP | A/C | A | A | A | A | C | C | A | |||||||||||||
rs30511753 MGI SNP Detail |
Chr6:144617993 | Sox5 Sox5it Sox5os3 |
SNP | A/G | A | A | A | A | G | G | A | |||||||||||||
rs46475178 MGI SNP Detail |
Chr6:144618256 | Sox5 Sox5it Sox5os3 |
SNP | A/C | A | A | C | C | A | |||||||||||||||
rs51692691 MGI SNP Detail |
Chr6:144618262 | Sox5 Sox5it Sox5os3 |
SNP | A/G | G | G | A | A | G | |||||||||||||||
rs262320231 MGI SNP Detail |
Chr6:144618313 | Sox5 Sox5it Sox5os3 |
SNP | C/T | C | T | ||||||||||||||||||
rs229044473 MGI SNP Detail |
Chr6:144618319 | Sox5 Sox5it Sox5os3 |
SNP | A/G | G | A | ||||||||||||||||||
rs36342669 MGI SNP Detail |
Chr6:144618392 | Sox5 Sox5it Sox5os3 |
SNP | A/G | G | G | A | G | A | A | A | A | A | G | A | G | G | |||||||
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129S1/SvImJ
|
129X1/SvJ
|
A/J
|
AKR/J
|
BALB/cByJ
|
BTBR T<+> Itpr3<tf>/J
|
C3H/HeJ
|
C57BL/6J
|
CAST/EiJ
|
CZECHII/EiJ
|
DBA/2J
|
FVB/NJ
|
KK/HlJ
|
LG/J
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NZW/LacJ
|
PWD/PhJ
|
SM/J
|
WSB/EiJ
|
rs219007893 MGI SNP Detail |
Chr6:144618495 | Sox5 Sox5os3 |
SNP | C/T | C | T | ||||||||||||||||||
rs239462783 MGI SNP Detail |
Chr6:144618501 | Sox5 Sox5os3 |
SNP | A/G | A | G | ||||||||||||||||||
rs246993136 MGI SNP Detail |
Chr6:144618629 | Sox5 Sox5os3 |
SNP | A/G | A | G | ||||||||||||||||||
rs214837621 MGI SNP Detail |
Chr6:144618646 | Sox5 Sox5os3 |
SNP | A/G | G | A | ||||||||||||||||||
rs36463303 MGI SNP Detail |
Chr6:144618676 | Sox5 Sox5os3 |
SNP | A/T | A | T | T | A | A | |||||||||||||||
rs250978481 MGI SNP Detail |
Chr6:144618684 | Sox5 Sox5os3 |
SNP | C/G | G | C | ||||||||||||||||||
rs222842050 MGI SNP Detail |
Chr6:144618783 | Sox5 Sox5os3 |
SNP | A/G | G | A | ||||||||||||||||||
rs36845784 MGI SNP Detail |
Chr6:144618818 | Sox5 Sox5os3 |
SNP | C/T | T | T | T | C | T | C | C | C | C | T | C | T | ||||||||
rs47413050 MGI SNP Detail |
Chr6:144618852 | Sox5 Sox5os3 |
SNP | C/T | C | C | T | T | C | |||||||||||||||
rs52264919 MGI SNP Detail |
Chr6:144618854 | Sox5 Sox5os3 |
SNP | C/T | T | T | C | C | T | |||||||||||||||
rs45785222 MGI SNP Detail |
Chr6:144618943 | Sox5 Sox5os3 |
SNP | C/G | C | C | G | G | C | |||||||||||||||
rs258214652 MGI SNP Detail |
Chr6:144618953 | Sox5 Sox5os3 |
SNP | A/G | A | G | ||||||||||||||||||
rs37179035 MGI SNP Detail |
Chr6:144618986 | Sox5 Sox5os3 |
SNP | A/G | G | G | G | A | G | A | A | A | A | A | G | A | A | |||||||
rs108183200 MGI SNP Detail |
Chr6:144619112 | Sox5 Sox5os3 |
SNP | A/G | A | A | G | G | A | |||||||||||||||
rs107794497 MGI SNP Detail |
Chr6:144619168 | Sox5 Sox5os3 |
SNP | C/T | T | T | C | C | T | |||||||||||||||
rs107651631 MGI SNP Detail |
Chr6:144619187 | Sox5 Sox5os3 |
SNP | A/G | A | A | G | G | A | |||||||||||||||
rs252450684 MGI SNP Detail |
Chr6:144619353 | Sox5 Sox5os3 |
SNP | A/G | A | G | ||||||||||||||||||
rs49111111 MGI SNP Detail |
Chr6:144619411 | Sox5 Sox5os3 |
SNP | C/G | C | C | G | G | C | |||||||||||||||
rs37536914 MGI SNP Detail |
Chr6:144619456 | Sox5 Sox5os3 |
SNP | A/T | T | A | A | A | A | A | A | |||||||||||||
rs38491939 MGI SNP Detail |
Chr6:144619471 | Sox5 Sox5os3 |
SNP | C/T | C | C | C | T | C | T | T | T | T | T | T | C | T | C | C | |||||
rs30761760 MGI SNP Detail |
Chr6:144619782 | Rr143322 Sox5 Sox5os3 |
SNP | A/G | A | A | A | G | G | A | ||||||||||||||
rs37826079 MGI SNP Detail |
Chr6:144619829 | Rr143322 Sox5 Sox5os3 |
SNP | A/G | G | G | G | A | G | A | A | G | A | A | A | G | A | G | ||||||
rs37045990 MGI SNP Detail |
Chr6:144619952 | Rr143322 Sox5 Sox5os3 |
SNP | A/G | A | A | A | G | A | G | G | A | G | G | G | A | G | A | A | |||||
rs47000714 MGI SNP Detail |
Chr6:144620057 | Sox5 Sox5os3 |
SNP | C/T | C | C | T | T | C | |||||||||||||||
rs213033262 MGI SNP Detail |
Chr6:144620070 | Sox5 Sox5os3 |
SNP | A/T | T | A | ||||||||||||||||||
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129S1/SvImJ
|
129X1/SvJ
|
A/J
|
AKR/J
|
BALB/cByJ
|
BTBR T<+> Itpr3<tf>/J
|
C3H/HeJ
|
C57BL/6J
|
CAST/EiJ
|
CZECHII/EiJ
|
DBA/2J
|
FVB/NJ
|
KK/HlJ
|
LG/J
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NZW/LacJ
|
PWD/PhJ
|
SM/J
|
WSB/EiJ
|
rs37260069 MGI SNP Detail |
Chr6:144620246 | Sox5 Sox5os3 |
SNP | A/G | G | G | A | G | A | A | A | A | G | G | G | |||||||||
rs108166500 MGI SNP Detail |
Chr6:144620281 | Sox5 Sox5os3 |
SNP | A/C | A | A | C | C | A | |||||||||||||||
rs227012640 MGI SNP Detail |
Chr6:144620416 | Rr139299 Sox5 Sox5os3 |
SNP | C/T | C | T | ||||||||||||||||||
rs234773040 MGI SNP Detail |
Chr6:144620421 | Rr139299 Sox5 Sox5os3 |
SNP | C/T | C | T | ||||||||||||||||||
rs50703709 MGI SNP Detail |
Chr6:144620457 | Rr139299 Sox5 Sox5os3 |
SNP | A/G | G | G | A | A | G | |||||||||||||||
rs51405049 MGI SNP Detail |
Chr6:144620506 | Rr139299 Sox5 Sox5os3 |
SNP | A/G | A | A | G | G | A | |||||||||||||||
rs51781726 MGI SNP Detail |
Chr6:144620508 | Rr139299 Sox5 Sox5os3 |
SNP | A/G | G | G | A | A | G | |||||||||||||||
rs49896940 MGI SNP Detail |
Chr6:144620592 | Rr139299 Sox5 Sox5os3 |
SNP | A/T | T | T | A | A | T | |||||||||||||||
rs52286275 MGI SNP Detail |
Chr6:144620645 | Rr139299 Sox5 Sox5os3 |
SNP | C/T | C | C | T | T | C | |||||||||||||||
rs52562949 MGI SNP Detail |
Chr6:144620722 | Rr139299 Sox5 Sox5os3 |
SNP | A/T | T | T | A | A | T | |||||||||||||||
rs52322251 MGI SNP Detail |
Chr6:144620739 | Rr139299 Sox5 Sox5os3 |
SNP | A/G | A | A | G | G | A | |||||||||||||||
rs50314992 MGI SNP Detail |
Chr6:144620769 | Rr139299 Sox5 Sox5os3 |
SNP | A/G | A | A | G | G | A | |||||||||||||||
rs36376783 MGI SNP Detail |
Chr6:144620822 | Sox5 Sox5os3 |
SNP | C/T | C | C | C | T | C | T | T | T | T | T | T | C | T | |||||||
rs36645496 MGI SNP Detail |
Chr6:144620855 | Sox5 Sox5os3 |
SNP | A/G | A | A | G | A | G | G | G | G | G | A | A | |||||||||
rs226530021 MGI SNP Detail |
Chr6:144620877 | Sox5 Sox5os3 |
SNP | C/T | C | T | ||||||||||||||||||
rs50870744 MGI SNP Detail |
Chr6:144620886 | Sox5 Sox5os3 |
SNP | C/G | G | G | C | |||||||||||||||||
rs48630005 MGI SNP Detail |
Chr6:144620895 | Sox5 Sox5os3 |
SNP | A/T | T | T | A | A | T | |||||||||||||||
rs39004755 MGI SNP Detail |
Chr6:144620924 | Sox5 Sox5os3 |
SNP | A/G | A | A | G | A | G | G | G | G | G | A | G | A | ||||||||
rs51212481 MGI SNP Detail |
Chr6:144621004 | Rr148311 Sox5 Sox5os3 |
SNP | C/T | C | C | T | T | C | |||||||||||||||
rs37284151 MGI SNP Detail |
Chr6:144621040 | Rr148311 Sox5 Sox5os3 |
SNP | G/T | G | G | G | T | G | T | T | T | T | T | G | T | G | |||||||
rs38243568 MGI SNP Detail |
Chr6:144621097 | Rr148311 Sox5 Sox5os3 |
SNP | A/G | G | G | G | A | G | A | A | A | A | A | A | G | A | G | G | |||||
rs46127806 MGI SNP Detail |
Chr6:144621203 | Sox5 Sox5os3 |
SNP | C/T | C | C | T | T | C | |||||||||||||||
rs48759463 MGI SNP Detail |
Chr6:144621269 | Sox5 Sox5os3 |
SNP | C/G | G | C | C | G | ||||||||||||||||
rs46203254 MGI SNP Detail |
Chr6:144621299 | Sox5 Sox5os3 |
SNP | A/G | A | G | G | A | ||||||||||||||||
rs36291353 MGI SNP Detail |
Chr6:144621345 | Sox5 Sox5os3 |
SNP | C/T | T | T | C | T | C | C | C | C | C | C | C | T | C | T | ||||||
SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129S1/SvImJ
|
129X1/SvJ
|
A/J
|
AKR/J
|
BALB/cByJ
|
BTBR T<+> Itpr3<tf>/J
|
C3H/HeJ
|
C57BL/6J
|
CAST/EiJ
|
CZECHII/EiJ
|
DBA/2J
|
FVB/NJ
|
KK/HlJ
|
LG/J
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NZW/LacJ
|
PWD/PhJ
|
SM/J
|
WSB/EiJ
|
rs48979762 MGI SNP Detail |
Chr6:144621416 | Sox5 Sox5os3 |
SNP | A/G | G | A | A | G | ||||||||||||||||
rs48527529 MGI SNP Detail |
Chr6:144621427 | Sox5 Sox5os3 |
SNP | C/T | T | C | C | T | ||||||||||||||||
rs52475791 MGI SNP Detail |
Chr6:144621477 | Sox5 Sox5os3 |
SNP | C/T | T | C | C | T | ||||||||||||||||
rs52186439 MGI SNP Detail |
Chr6:144621495 | Sox5 Sox5os3 |
SNP | C/T | T | C | C | T | ||||||||||||||||
rs52442769 MGI SNP Detail |
Chr6:144621535 | Sox5 Sox5os3 |
SNP | G/T | G | T | T | G | ||||||||||||||||
rs52283112 MGI SNP Detail |
Chr6:144621556 | Sox5 Sox5os3 |
SNP | C/T | C | T | T | C | ||||||||||||||||
rs37936264 MGI SNP Detail |
Chr6:144621678 | Sox5 Sox5os3 |
SNP | A/G | A | A | G | A | G | G | G | G | G | A | G | A | ||||||||
rs36425290 MGI SNP Detail |
Chr6:144622200 | Sox5 Sox5os3 |
SNP | A/G | A | A | A | G | A | G | G | G | G | G | G | A | G | A | A | |||||
rs38475779 MGI SNP Detail |
Chr6:144622302 | Sox5 Sox5os3 |
SNP | A/G | G | G | A | G | A | A | A | A | A | A | G | A | G | G | ||||||
rs37207705 MGI SNP Detail |
Chr6:144622340 | Sox5 Sox5os3 |
SNP | C/G | G | C | G | C | G | G | G | C | G | G | C | |||||||||
rs30222937 MGI SNP Detail |
Chr6:144622378 | Sox5 Sox5os3 |
SNP | A/G | A | A | A | G | G | A | ||||||||||||||
rs259912267 MGI SNP Detail |
Chr6:144622652 | Rr148312 Sox5 Sox5os3 |
SNP | A/G | A | G | ||||||||||||||||||
rs216419927 MGI SNP Detail |
Chr6:144622679 | Rr148312 Sox5 Sox5os3 |
SNP | C/T | C | T | ||||||||||||||||||
rs37929736 MGI SNP Detail |
Chr6:144622713 | Rr148312 Sox5 Sox5os3 |
SNP | A/G | G | G | A | G | G | A | A | G | A | A | A | G | G | A | G | G | ||||
rs37820595 MGI SNP Detail |
Chr6:144622755 | Rr148312 Sox5 Sox5os3 |
SNP | C/T | C | C | T | C | C | T | C | T | C | T | T | T | C | C | T | C | C | |||
rs29935042 MGI SNP Detail |
Chr6:144622826 | Rr148312 Sox5 Sox5os3 |
SNP | C/G | C | C | C | G | C | ? | G | C | C | G | C | G | G | G | C | C | G | C | C | |
rs30328080 MGI SNP Detail |
Chr6:144622869 | Rr148312 Sox5 Sox5os3 |
SNP | C/T | T | T | T | C | T | T | C | T | T | C | T | C | C | C | T | T | C | T | T | |
rs49318801 MGI SNP Detail |
Chr6:144623143 | Rr148312 Rr400037 Sox5 Sox5os3 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | T | G | G | G | ||||||
rs49219057 MGI SNP Detail |
Chr6:144623233 | Rr148312 Rr400037 Sox5 Sox5os3 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | |||||
rs51933348 MGI SNP Detail |
Chr6:144623334 | Rr148312 Rr400037 Sox5 Sox5os3 |
SNP | C/T | T | T | T | C | T | T | C | T | C | T | C | C | C | T | T | C | T | T | ||
rs50129049 MGI SNP Detail |
Chr6:144623413 | Rr148312 Sox5 Sox5os3 |
SNP | C/T | C | C | C | T | C | C | T | T | C | T | T | T | C | C | T | C | C | |||
rs29926490 MGI SNP Detail |
Chr6:144623520 | Rr148312 Sox5 Sox5os3 |
SNP | A/T | A | A | A | T | A | A | T | A | A | T | A | T | T | T | A | A | T | A | A | |
rs29969838 MGI SNP Detail |
Chr6:144623692 | Rr148312 Sox5 Sox5os3 |
SNP | A/G | A | A | A | G | A | A | G | A | A | G | A | G | G | G | A | A | G | A | A | |
rs222897553 MGI SNP Detail |
Chr6:144624593 | Rr148312 Sox5 Sox5os3 |
SNP | C/T | C | T | ||||||||||||||||||
rs3705745 MGI SNP Detail |
Chr6:144624692 | Rr148312 Sox5 Sox5os3 |
SNP | A/G | A | A | A | G | A | A | G | A | G | A | G | G | G | A | G | A | A |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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