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Mouse SNP Summary
Symbol
Name
ID 		Sec14l2
SEC14-like lipid binding 2
MGI:1915065

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234862154
MGI SNP Detail
Alliance Variant		 Chr11:4045136 Cpgi2503 within coordinates of
Mtfp1 Intron
Mtfp1 Noncoding-Transcript-Variant
Rr441724 within coordinates of
Sec14l2 1903 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251193415
MGI SNP Detail
Alliance Variant		 Chr11:4045181 Cpgi2503 within coordinates of
Gm72847 within coordinates of
Mtfp1 Intron
Rr441724 within coordinates of
Sec14l2 1858 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs221449830
MGI SNP Detail
Alliance Variant		 Chr11:4045413 Cpgi2503 within coordinates of
Gm72847 within coordinates of
Mtfp1 mRNA-UTR
Sec14l2 1626 bp downstream
Tssr106532 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237385872
MGI SNP Detail		 Chr11:4045535 Gm72847 within coordinates of
Rr441726 within coordinates of
Sec14l2 1504 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257774028
MGI SNP Detail		 Chr11:4045750 Gm72847 within coordinates of
Rr441726 within coordinates of
Sec14l2 1289 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219959701
MGI SNP Detail		 Chr11:4045765 Gm72847 within coordinates of
Rr441726 within coordinates of
Sec14l2 1274 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs241382438
MGI SNP Detail		 Chr11:4045854 Gm72847 within coordinates of
Rr441726 within coordinates of
Sec14l2 1185 bp downstream
 SNP A/G A A A A A G A A A A A A G G A A A A G G A A G A A A A G G A A A A A A A A A A A A A A A A A A A G A A A A
rs264907641
MGI SNP Detail		 Chr11:4045873 Gm72847 within coordinates of
Rr441726 within coordinates of
Sec14l2 1166 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs228563155
MGI SNP Detail		 Chr11:4045919 Gm72847 within coordinates of
Rr441726 within coordinates of
Sec14l2 1120 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242874937
MGI SNP Detail		 Chr11:4045945 Gm72847 within coordinates of
Sec14l2 1094 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs259488272
MGI SNP Detail		 Chr11:4046055 Gm72847 within coordinates of
Sec14l2 984 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228325702
MGI SNP Detail		 Chr11:4046120 Gm72847 within coordinates of
Rr369115 within coordinates of
Sec14l2 919 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255757025
MGI SNP Detail		 Chr11:4046256 Gm72847 within coordinates of
Rr369115 within coordinates of
Sec14l2 783 bp downstream
 SNP A/T T T T T T A T T T T T T A A T T T T A A T T A T T T T A A T T T T T T T A T T T T T T T T T T T A T T T A
rs215042665
MGI SNP Detail		 Chr11:4046280 Gm72847 within coordinates of
Rr369115 within coordinates of
Sec14l2 759 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228627072
MGI SNP Detail		 Chr11:4046288 Gm72847 within coordinates of
Rr369115 within coordinates of
Sec14l2 751 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249628427
MGI SNP Detail		 Chr11:4046631 Cpgi2504 within coordinates of
Gm72847 within coordinates of
Rr369115 within coordinates of
Sec14l2 408 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216500444
MGI SNP Detail		 Chr11:4046841 Cpgi2504 within coordinates of
Gm72847 within coordinates of
Rr369115 within coordinates of
Sec14l2 198 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578653240
MGI SNP Detail		 Chr11:4046958 Cpgi2504 within coordinates of
Gm72847 within coordinates of
Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 81 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs26913727
MGI SNP Detail		 Chr11:4046975 Cpgi2504 within coordinates of
Gm72847 within coordinates of
Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 64 bp downstream
 SNP G/T T T T T T T T T T G T T T T
rs234848800
MGI SNP Detail		 Chr11:4046984 Cpgi2504 within coordinates of
Gm72847 within coordinates of
Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 55 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs250957756
MGI SNP Detail		 Chr11:4047032 Cpgi2504 within coordinates of
Gm72847 within coordinates of
Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 7 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215887764
MGI SNP Detail
Alliance Variant		 Chr11:4047142 Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs231364210
MGI SNP Detail
Alliance Variant		 Chr11:4047147 Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262447912
MGI SNP Detail
Alliance Variant		 Chr11:4047241 Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs220160551
MGI SNP Detail
Alliance Variant		 Chr11:4047243 Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP C/T C C C C C T C C C C C C T T C C C C T T C C T C C C C T T C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244893106
MGI SNP Detail
Alliance Variant		 Chr11:4047270 Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256442913
MGI SNP Detail
Alliance Variant		 Chr11:4047284 Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222905972
MGI SNP Detail
Alliance Variant		 Chr11:4047408 Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242812001
MGI SNP Detail
Alliance Variant		 Chr11:4047412 Rr369115 within coordinates of
Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259132115
MGI SNP Detail
Alliance Variant		 Chr11:4047568 Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs26913726
MGI SNP Detail
Alliance Variant		 Chr11:4047573 Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP A/G A A A A A A G A A G A A A A
rs26913725
MGI SNP Detail
Alliance Variant		 Chr11:4047602 Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP C/T C C C C C C T C C T C C C C
rs265393451
MGI SNP Detail
Alliance Variant		 Chr11:4047608 Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227998848
MGI SNP Detail
Alliance Variant		 Chr11:4047641 Rr441727 within coordinates of
Sec14l2 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586333420
MGI SNP Detail
Alliance Variant		 Chr11:4047776 Sec14l2 mRNA-UTR
Sec14l2 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254606608
MGI SNP Detail
Alliance Variant		 Chr11:4047788 Sec14l2 mRNA-UTR
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T C T T T T C T T T T C C T T C T T T T C T T T T T T T T T T T T T T T T T C T T T T
rs258695520
MGI SNP Detail
Alliance Variant		 Chr11:4047824 Sec14l2 mRNA-UTR
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C C T C C C C C T C C C C T T C C T C C C C T T C C C C C C C C C C C C C C C C C T C C C C
rs229063805
MGI SNP Detail
Alliance Variant		 Chr11:4047837 Sec14l2 mRNA-UTR
Sec14l2 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs245077379
MGI SNP Detail
Alliance Variant		 Chr11:4047905 Sec14l2 mRNA-UTR
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215602726
MGI SNP Detail
Alliance Variant		 Chr11:4047954 Sec14l2 mRNA-UTR
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237654562
MGI SNP Detail
Alliance Variant		 Chr11:4047977 Sec14l2 mRNA-UTR
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580512952
MGI SNP Detail
Alliance Variant		 Chr11:4048023 Rr441728 within coordinates of
Sec14l2 mRNA-UTR
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251450727
MGI SNP Detail
Alliance Variant		 Chr11:4048108 Sec14l2 mRNA-UTR
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C C T C C C C C C T T C C C C T T C C T C C C C T T C C C C C C C T C C C C C C C C C C C T C C C T
rs212259230
MGI SNP Detail
Alliance Variant		 Chr11:4048182 Sec14l2 mRNA-UTR
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235347275
MGI SNP Detail
Alliance Variant		 Chr11:4048274 Sec14l2 mRNA-UTR
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263696783
MGI SNP Detail
Alliance Variant		 Chr11:4048318 Rr441729 within coordinates of
Sec14l2 Coding-NonSynonymous
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs26913724
MGI SNP Detail
Alliance Variant		 Chr11:4048422 Sec14l2 Coding-Synonymous
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G A G G G G G
rs579791623
MGI SNP Detail
Alliance Variant		 Chr11:4048647 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs236539601
MGI SNP Detail
Alliance Variant		 Chr11:4048699 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253030004
MGI SNP Detail
Alliance Variant		 Chr11:4048732 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221904699
MGI SNP Detail
Alliance Variant		 Chr11:4048737 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583303845
MGI SNP Detail
Alliance Variant		 Chr11:4048760 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586619939
MGI SNP Detail
Alliance Variant		 Chr11:4048774 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246096973
MGI SNP Detail
Alliance Variant		 Chr11:4048828 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262961264
MGI SNP Detail
Alliance Variant		 Chr11:4048830 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220590239
MGI SNP Detail
Alliance Variant		 Chr11:4048896 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242489553
MGI SNP Detail
Alliance Variant		 Chr11:4048910 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259290414
MGI SNP Detail
Alliance Variant		 Chr11:4048939 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229494223
MGI SNP Detail
Alliance Variant		 Chr11:4048953 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs245028227
MGI SNP Detail
Alliance Variant		 Chr11:4048964 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257866034
MGI SNP Detail
Alliance Variant		 Chr11:4048966 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229429267
MGI SNP Detail
Alliance Variant		 Chr11:4048980 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs255931073
MGI SNP Detail
Alliance Variant		 Chr11:4048986 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212000900
MGI SNP Detail
Alliance Variant		 Chr11:4048987 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237291408
MGI SNP Detail
Alliance Variant		 Chr11:4049014 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248007291
MGI SNP Detail
Alliance Variant		 Chr11:4049017 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217255857
MGI SNP Detail
Alliance Variant		 Chr11:4049059 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs233775520
MGI SNP Detail
Alliance Variant		 Chr11:4049179 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253019814
MGI SNP Detail
Alliance Variant		 Chr11:4049198 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225466038
MGI SNP Detail
Alliance Variant		 Chr11:4049273 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs26913723
MGI SNP Detail
Alliance Variant		 Chr11:4049302 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/T A A A A A A A A A T A A A A
rs236262206
MGI SNP Detail
Alliance Variant		 Chr11:4049402 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/C A A A A A C A A A A A A C C A A A A C C A A C A A A A C C A A A A A A A C A A A A A A A A A A A C A A A C
rs262510544
MGI SNP Detail
Alliance Variant		 Chr11:4049425 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220529075
MGI SNP Detail
Alliance Variant		 Chr11:4049435 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/C/T A A A A A C A A A A A A C C A A A A C C A A C A A A A C C A A A A A A A C A A A A A A A A A A A T A A A C
rs245436500
MGI SNP Detail
Alliance Variant		 Chr11:4049437 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/C C C C C C A C C C C C C A A C C C C A A C C A C C C C A A C C C C C C C A C C C C C C C C C C C A C C C A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252886057
MGI SNP Detail
Alliance Variant		 Chr11:4049470 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222935348
MGI SNP Detail
Alliance Variant		 Chr11:4049665 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239539619
MGI SNP Detail
Alliance Variant		 Chr11:4049680 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs26913722
MGI SNP Detail
Alliance Variant		 Chr11:4049752 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C T C T C C C
rs229967436
MGI SNP Detail
Alliance Variant		 Chr11:4049811 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243713382
MGI SNP Detail
Alliance Variant		 Chr11:4049850 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264466445
MGI SNP Detail
Alliance Variant		 Chr11:4050139 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T C T T T
rs228308856
MGI SNP Detail
Alliance Variant		 Chr11:4050233 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs247943729
MGI SNP Detail
Alliance Variant		 Chr11:4050314 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217433477
MGI SNP Detail
Alliance Variant		 Chr11:4050321 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227226083
MGI SNP Detail
Alliance Variant		 Chr11:4050324 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T C T T T C
rs583202947
MGI SNP Detail
Alliance Variant		 Chr11:4050347 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587368404
MGI SNP Detail
Alliance Variant		 Chr11:4050359 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247165194
MGI SNP Detail
Alliance Variant		 Chr11:4050419 Rr441730 within coordinates of
Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G A G G G
rs216903782
MGI SNP Detail
Alliance Variant		 Chr11:4050523 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C G C C C G
rs238254685
MGI SNP Detail
Alliance Variant		 Chr11:4050528 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T C T T T C
rs258054434
MGI SNP Detail
Alliance Variant		 Chr11:4050543 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs26913721
MGI SNP Detail
Alliance Variant		 Chr11:4050683 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C T C C C C C
rs581794969
MGI SNP Detail
Alliance Variant		 Chr11:4050748 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs26913720
MGI SNP Detail
Alliance Variant		 Chr11:4050761 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP G/T T T T T T T T T T G T T T T
rs584880543
MGI SNP Detail
Alliance Variant		 Chr11:4050820 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G
rs579094014
MGI SNP Detail
Alliance Variant		 Chr11:4051155 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP G/T T T T T T T T T T T T T T T T G T T G T T T T T T T T T T T T T T T T T T T T T T T
rs212277981
MGI SNP Detail
Alliance Variant		 Chr11:4051238 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs26913719
MGI SNP Detail
Alliance Variant		 Chr11:4051295 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/T A A A A A A A A T A A A A
rs230797951
MGI SNP Detail
Alliance Variant		 Chr11:4051310 Sec14l2 Intron
Sec14l2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 498
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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