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Mouse SNP Summary
Symbol
Name
ID
Trap1
TNF receptor-associated protein 1
MGI:1915265

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253916483
MGI SNP Detail
Alliance Variant
Chr16:3855863 Dnase1 Coding-NonSynonymous
Trap1 1972 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213274858
MGI SNP Detail
Alliance Variant
Chr16:3855874 Dnase1 Coding-Synonymous
Trap1 1961 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234531269
MGI SNP Detail
Alliance Variant
Chr16:3855919 Dnase1 Intron
Trap1 1916 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs4152456
MGI SNP Detail
Alliance Variant
Chr16:3855931 Dnase1 Intron
Trap1 1904 bp downstream
SNP C/G C G G C C
rs219364058
MGI SNP Detail
Alliance Variant
Chr16:3855935 Dnase1 Intron
Trap1 1900 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32223736
MGI SNP Detail
Alliance Variant
Chr16:3855948 Dnase1 Intron
Trap1 1887 bp downstream
SNP C/T T T C T
rs252463157
MGI SNP Detail
Alliance Variant
Chr16:3856008 Dnase1 Intron
Trap1 1827 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs223179868
MGI SNP Detail
Alliance Variant
Chr16:3856217 Dnase1 Intron
Trap1 1618 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251829015
MGI SNP Detail
Alliance Variant
Chr16:3856322 Dnase1 Intron
Trap1 1513 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32223737
MGI SNP Detail
Alliance Variant
Chr16:3856327 Dnase1 Intron
Trap1 1508 bp downstream
SNP A/G A G
rs221606115
MGI SNP Detail
Alliance Variant
Chr16:3856328 Dnase1 Intron
Trap1 1507 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs241541655
MGI SNP Detail
Alliance Variant
Chr16:3856364 Dnase1 Intron
Trap1 1471 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32223739
MGI SNP Detail
Alliance Variant
Chr16:3856473 Dnase1 Coding-Synonymous
Trap1 1362 bp downstream
SNP C/T T T T T T T C T C
rs225448956
MGI SNP Detail
Alliance Variant
Chr16:3856516 Dnase1 Intron
Trap1 1319 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs246155951
MGI SNP Detail
Alliance Variant
Chr16:3856537 Dnase1 Intron
Trap1 1298 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257287458
MGI SNP Detail
Alliance Variant
Chr16:3856542 Dnase1 Intron
Trap1 1293 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233922689
MGI SNP Detail
Alliance Variant
Chr16:3856649 Dnase1 Intron
Trap1 1186 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A C A A A A A A A A A A A A
rs259290934
MGI SNP Detail
Alliance Variant
Chr16:3856657 Dnase1 Intron
Trap1 1178 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212791753
MGI SNP Detail
Alliance Variant
Chr16:3856723 Dnase1 Intron
Trap1 1112 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236253218
MGI SNP Detail
Alliance Variant
Chr16:3856816 Dnase1 Coding-NonSynonymous
Trap1 1019 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs245567561
MGI SNP Detail
Alliance Variant
Chr16:3856869 Dnase1 Coding-NonSynonymous
Dnase1 Intron
Trap1 966 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213539426
MGI SNP Detail
Alliance Variant
Chr16:3856927 Dnase1 Intron
Dnase1 Splice-Site
Trap1 908 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32223740
MGI SNP Detail
Alliance Variant
Chr16:3856986 Dnase1 Coding-Synonymous
Dnase1 Intron
Dnase1 Splice-Site
Trap1 849 bp downstream
SNP A/G G G G G G G A G G G A G G G G
rs252606869
MGI SNP Detail
Alliance Variant
Chr16:3857151 Dnase1 Intron
Dnase1 Splice-Site
Trap1 684 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs4152457
MGI SNP Detail
Alliance Variant
Chr16:3857182 Dnase1 Intron
Trap1 653 bp downstream
SNP A/T T A T T A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs4152458
MGI SNP Detail
Alliance Variant
Chr16:3857183 Dnase1 Intron
Trap1 652 bp downstream
SNP A/C C A C C A A
rs261324022
MGI SNP Detail
Alliance Variant
Chr16:3857211 Dnase1 Intron
Trap1 624 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T
rs222058922
MGI SNP Detail
Alliance Variant
Chr16:3857279 Dnase1 Intron
Trap1 556 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs32223741
MGI SNP Detail
Alliance Variant
Chr16:3857345 Dnase1 Intron
Trap1 490 bp downstream
SNP A/G G G G G G G A G G G A G G G G
rs250712247
MGI SNP Detail
Alliance Variant
Chr16:3857386 Dnase1 Intron
Trap1 449 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs13473196
MGI SNP Detail
Alliance Variant
Chr16:3857488 Dnase1 Coding-NonSynonymous
Dnase1 Intron
Dnase1 mRNA-UTR
Trap1 347 bp downstream
SNP A/G G G G G A G G G A G G G G G G
rs219624216
MGI SNP Detail
Alliance Variant
Chr16:3857636 Dnase1 Intron
Trap1 199 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580307976
MGI SNP Detail
Alliance Variant
Chr16:3857645 Dnase1 Intron
Trap1 190 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240340759
MGI SNP Detail
Alliance Variant
Chr16:3857712 Dnase1 Coding-NonSynonymous
Dnase1 mRNA-UTR
Trap1 123 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs257408268
MGI SNP Detail
Alliance Variant
Chr16:3857721 Dnase1 Coding-NonSynonymous
Dnase1 mRNA-UTR
Trap1 114 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs235218715
MGI SNP Detail
Alliance Variant
Chr16:3857777 Dnase1 mRNA-UTR
Trap1 58 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs247519344
MGI SNP Detail
Alliance Variant
Chr16:3857791 Dnase1 mRNA-UTR
Trap1 44 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264881391
MGI SNP Detail
Alliance Variant
Chr16:3857828 Dnase1 mRNA-UTR
Trap1 7 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227565095
MGI SNP Detail
Alliance Variant
Chr16:3857916 Trap1 mRNA-UTR
Trap1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs245723426
MGI SNP Detail
Alliance Variant
Chr16:3857919 Trap1 mRNA-UTR
Trap1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213506765
MGI SNP Detail
Alliance Variant
Chr16:3858132 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227977888
MGI SNP Detail
Alliance Variant
Chr16:3858272 Trap1 Coding-NonSynonymous
Trap1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246385485
MGI SNP Detail
Alliance Variant
Chr16:3858320 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218865805
MGI SNP Detail
Alliance Variant
Chr16:3858538 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241816940
MGI SNP Detail
Alliance Variant
Chr16:3858616 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs255912620
MGI SNP Detail
Alliance Variant
Chr16:3858668 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211802472
MGI SNP Detail
Alliance Variant
Chr16:3858669 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230315477
MGI SNP Detail
Alliance Variant
Chr16:3858681 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs250827058
MGI SNP Detail
Alliance Variant
Chr16:3858726 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs583977884
MGI SNP Detail
Alliance Variant
Chr16:3858766 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219724120
MGI SNP Detail
Alliance Variant
Chr16:3858802 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs4152459
MGI SNP Detail
Alliance Variant
Chr16:3858934 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T C T C C T T
rs263076396
MGI SNP Detail
Alliance Variant
Chr16:3858951 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226852335
MGI SNP Detail
Alliance Variant
Chr16:3858991 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs4152460
MGI SNP Detail
Alliance Variant
Chr16:3859007 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T T T C T C T T C T C C C T C C C
rs261964620
MGI SNP Detail
Alliance Variant
Chr16:3859113 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228321786
MGI SNP Detail
Alliance Variant
Chr16:3859171 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs4152461
MGI SNP Detail
Alliance Variant
Chr16:3859331 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G A G A A A G
rs257503087
MGI SNP Detail
Alliance Variant
Chr16:3859374 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228106075
MGI SNP Detail
Alliance Variant
Chr16:3859409 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587495548
MGI SNP Detail
Alliance Variant
Chr16:3859441 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246300690
MGI SNP Detail
Alliance Variant
Chr16:3859486 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs218957879
MGI SNP Detail
Alliance Variant
Chr16:3859549 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232880751
MGI SNP Detail
Alliance Variant
Chr16:3859701 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs253863703
MGI SNP Detail
Alliance Variant
Chr16:3859734 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs211866077
MGI SNP Detail
Alliance Variant
Chr16:3859746 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs231832513
MGI SNP Detail
Alliance Variant
Chr16:3859766 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243558430
MGI SNP Detail
Alliance Variant
Chr16:3859768 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213990326
MGI SNP Detail
Alliance Variant
Chr16:3859779 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233907376
MGI SNP Detail
Alliance Variant
Chr16:3859781 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs258870372
MGI SNP Detail
Alliance Variant
Chr16:3859785 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs227513598
MGI SNP Detail
Alliance Variant
Chr16:3859788 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239639612
MGI SNP Detail
Alliance Variant
Chr16:3859795 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32224745
MGI SNP Detail
Alliance Variant
Chr16:3859797 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/G C C C C C C G C C C G C C C
rs218342768
MGI SNP Detail
Alliance Variant
Chr16:3859808 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239787791
MGI SNP Detail
Alliance Variant
Chr16:3859816 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257619345
MGI SNP Detail
Alliance Variant
Chr16:3859833 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs32224747
MGI SNP Detail
Alliance Variant
Chr16:3859860 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T C T T C T
rs32224749
MGI SNP Detail
Alliance Variant
Chr16:3859927 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T T T
rs264351018
MGI SNP Detail
Alliance Variant
Chr16:3859961 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs233889121
MGI SNP Detail
Alliance Variant
Chr16:3859996 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs32224751
MGI SNP Detail
Alliance Variant
Chr16:3860009 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G G G G G G G A G G G A G G A G
rs264542641
MGI SNP Detail
Alliance Variant
Chr16:3860014 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs4152462
MGI SNP Detail
Alliance Variant
Chr16:3860027 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP G/T G G T G G T T
rs243469773
MGI SNP Detail
Alliance Variant
Chr16:3860048 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs4152463
MGI SNP Detail
Alliance Variant
Chr16:3860054 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T C C T C C T T
rs233874158
MGI SNP Detail
Alliance Variant
Chr16:3860063 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs49722168
MGI SNP Detail
Alliance Variant
Chr16:3860186 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/C C A A
rs257764616
MGI SNP Detail
Alliance Variant
Chr16:3860662 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs219797461
MGI SNP Detail
Alliance Variant
Chr16:3860713 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242392940
MGI SNP Detail
Alliance Variant
Chr16:3860726 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32224753
MGI SNP Detail
Alliance Variant
Chr16:3860766 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP G/T T T T T T G T T T G T T G T
rs218270753
MGI SNP Detail
Alliance Variant
Chr16:3860794 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233080248
MGI SNP Detail
Alliance Variant
Chr16:3860933 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs251255518
MGI SNP Detail
Alliance Variant
Chr16:3860969 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221972255
MGI SNP Detail
Alliance Variant
Chr16:3861067 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs579453894
MGI SNP Detail
Alliance Variant
Chr16:3861179 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32225545
MGI SNP Detail
Alliance Variant
Chr16:3861275 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T C T T C T
rs266128692
MGI SNP Detail
Alliance Variant
Chr16:3861323 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225775654
MGI SNP Detail
Alliance Variant
Chr16:3861342 Trap1 Intron
Trap1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 100 of 768

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory