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Mouse SNP Summary
Symbol
Name
ID
Ms4a20
membrane-spanning 4-domains, subfamily A, member 20
MGI:1916619

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221743285
MGI SNP Detail
Chr19:11072219 Ms4a20 1959 bp downstream
Ms4ac within coordinates of
Rr394119 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241370774
MGI SNP Detail
Chr19:11072258 Ms4a20 1920 bp downstream
Ms4ac within coordinates of
Rr394119 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263052607
MGI SNP Detail
Chr19:11072281 Ms4a20 1897 bp downstream
Ms4ac within coordinates of
Rr394119 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs232954136
MGI SNP Detail
Chr19:11072303 Ms4a20 1875 bp downstream
Ms4ac within coordinates of
Rr394119 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs242927524
MGI SNP Detail
Chr19:11072404 Ms4a20 1774 bp downstream
Ms4ac within coordinates of
Rr394119 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265280482
MGI SNP Detail
Chr19:11072411 Ms4a20 1767 bp downstream
Ms4ac within coordinates of
Rr394119 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs224236144
MGI SNP Detail
Chr19:11072510 Ms4a20 1668 bp downstream
Ms4ac within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244245001
MGI SNP Detail
Chr19:11072616 Ms4a20 1562 bp downstream
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs212980572
MGI SNP Detail
Chr19:11072641 Ms4a20 1537 bp downstream
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228575345
MGI SNP Detail
Chr19:11072690 Ms4a20 1488 bp downstream
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs260394358
MGI SNP Detail
Chr19:11072741 Ms4a20 1437 bp downstream
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215892599
MGI SNP Detail
Chr19:11072761 Ms4a20 1417 bp downstream
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241447869
MGI SNP Detail
Chr19:11072767 Ms4a20 1411 bp downstream
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257302855
MGI SNP Detail
Chr19:11072791 Ms4a20 1387 bp downstream
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215487978
MGI SNP Detail
Chr19:11072794 Ms4a20 1384 bp downstream
Ms4ac within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230365510
MGI SNP Detail
Chr19:11073078 Ms4a20 1100 bp downstream
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249259938
MGI SNP Detail
Chr19:11073113 Ms4a20 1065 bp downstream
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs221766339
MGI SNP Detail
Chr19:11073117 Ms4a20 1061 bp downstream
Ms4ac within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234818484
MGI SNP Detail
Chr19:11073144 Ms4a20 1034 bp downstream
Ms4ac within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262779503
MGI SNP Detail
Chr19:11073199 Ms4a20 979 bp downstream
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224715295
MGI SNP Detail
Chr19:11073321 Ms4a20 857 bp downstream
Ms4ac within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs245696689
MGI SNP Detail
Chr19:11073390 Ms4a20 788 bp downstream
Ms4ac within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262737431
MGI SNP Detail
Chr19:11073451 Ms4a20 727 bp downstream
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218025246
MGI SNP Detail
Chr19:11073452 Ms4a20 726 bp downstream
Ms4ac within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs238065094
MGI SNP Detail
Chr19:11073490 Ms4a20 688 bp downstream
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs3700209
MGI SNP Detail
Chr19:11073491 Ms4a20 687 bp downstream
Ms4ac within coordinates of
SNP C/T C C C T C T
rs228595688
MGI SNP Detail
Chr19:11073545 Ms4a20 633 bp downstream
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254738991
MGI SNP Detail
Chr19:11073600 Ms4a20 578 bp downstream
Ms4ac within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs265550394
MGI SNP Detail
Chr19:11073658 Ms4a20 520 bp downstream
Ms4ac within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232588172
MGI SNP Detail
Chr19:11073731 Ms4a20 447 bp downstream
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255461923
MGI SNP Detail
Chr19:11073777 Ms4a20 401 bp downstream
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214704555
MGI SNP Detail
Chr19:11073840 Ms4a20 338 bp downstream
Ms4ac within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T G T G T G T T T G T T T T T T G T T T T T T T G T G T G
rs230222290
MGI SNP Detail
Chr19:11073894 Ms4a20 284 bp downstream
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243443297
MGI SNP Detail
Chr19:11074050 Ms4a20 128 bp downstream
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216974390
MGI SNP Detail
Alliance Variant
Chr19:11074180 Ms4a20 mRNA-UTR
Ms4ac within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs242671940
MGI SNP Detail
Alliance Variant
Chr19:11074236 Ms4a20 mRNA-UTR
Ms4ac within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258373502
MGI SNP Detail
Alliance Variant
Chr19:11074248 Ms4a20 mRNA-UTR
Ms4ac within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs224772823
MGI SNP Detail
Alliance Variant
Chr19:11074295 Ms4a20 mRNA-UTR
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235996665
MGI SNP Detail
Alliance Variant
Chr19:11074348 Ms4a20 Coding-NonSynonymous
Ms4a20 mRNA-UTR
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262310780
MGI SNP Detail
Alliance Variant
Chr19:11074361 Ms4a20 Coding-Synonymous
Ms4a20 mRNA-UTR
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218062973
MGI SNP Detail
Alliance Variant
Chr19:11074373 Ms4a20 Coding-NonSynonymous
Ms4a20 mRNA-UTR
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237904135
MGI SNP Detail
Alliance Variant
Chr19:11074375 Ms4a20 Coding-NonSynonymous
Ms4a20 mRNA-UTR
Ms4ac within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260623486
MGI SNP Detail
Alliance Variant
Chr19:11074381 Ms4a20 Coding-NonSynonymous
Ms4a20 mRNA-UTR
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223405531
MGI SNP Detail
Alliance Variant
Chr19:11074426 Ms4a20 Coding-NonSynonymous
Ms4a20 mRNA-UTR
Ms4ac within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247766170
MGI SNP Detail
Alliance Variant
Chr19:11074481 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263237907
MGI SNP Detail
Alliance Variant
Chr19:11074552 Ms4a20 Intron
Ms4ac within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs233167565
MGI SNP Detail
Alliance Variant
Chr19:11074583 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250902640
MGI SNP Detail
Alliance Variant
Chr19:11074640 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs387662095
MGI SNP Detail
Alliance Variant
Chr19:11074659 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T C T T
rs256472251
MGI SNP Detail
Alliance Variant
Chr19:11074718 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223735854
MGI SNP Detail
Alliance Variant
Chr19:11074754 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs243290101
MGI SNP Detail
Alliance Variant
Chr19:11074789 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216920108
MGI SNP Detail
Alliance Variant
Chr19:11074792 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234268586
MGI SNP Detail
Alliance Variant
Chr19:11074812 Ms4a20 Intron
Ms4ac within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs257712804
MGI SNP Detail
Alliance Variant
Chr19:11074852 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216328278
MGI SNP Detail
Alliance Variant
Chr19:11074901 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs237608164
MGI SNP Detail
Alliance Variant
Chr19:11074962 Ms4a20 Intron
Ms4ac within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs251804399
MGI SNP Detail
Alliance Variant
Chr19:11074975 Ms4a20 Intron
Ms4ac within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs211794629
MGI SNP Detail
Alliance Variant
Chr19:11074977 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230485464
MGI SNP Detail
Alliance Variant
Chr19:11074985 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254316093
MGI SNP Detail
Alliance Variant
Chr19:11075051 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223347833
MGI SNP Detail
Alliance Variant
Chr19:11075089 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs580113189
MGI SNP Detail
Alliance Variant
Chr19:11075128 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245253209
MGI SNP Detail
Alliance Variant
Chr19:11075173 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263322452
MGI SNP Detail
Alliance Variant
Chr19:11075254 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs225064896
MGI SNP Detail
Alliance Variant
Chr19:11075259 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246000819
MGI SNP Detail
Alliance Variant
Chr19:11075369 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256523167
MGI SNP Detail
Alliance Variant
Chr19:11075513 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223677967
MGI SNP Detail
Alliance Variant
Chr19:11075551 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236863634
MGI SNP Detail
Alliance Variant
Chr19:11075554 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259363909
MGI SNP Detail
Alliance Variant
Chr19:11075580 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235267017
MGI SNP Detail
Alliance Variant
Chr19:11075638 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38425737
MGI SNP Detail
Alliance Variant
Chr19:11075660 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/T A A A A A A T A A A A A A A A
rs217560815
MGI SNP Detail
Alliance Variant
Chr19:11075747 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36298689
MGI SNP Detail
Alliance Variant
Chr19:11075829 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G A G G G A G G A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245394384
MGI SNP Detail
Alliance Variant
Chr19:11075851 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211738891
MGI SNP Detail
Alliance Variant
Chr19:11075884 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs230430867
MGI SNP Detail
Alliance Variant
Chr19:11075891 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs37648015
MGI SNP Detail
Alliance Variant
Chr19:11075948 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T T T T T T T T C T T T T T T
rs387516065
MGI SNP Detail
Alliance Variant
Chr19:11076007 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs36752252
MGI SNP Detail
Alliance Variant
Chr19:11076143 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G A G G A G
rs48784697
MGI SNP Detail
Alliance Variant
Chr19:11076146 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T C C
rs219037009
MGI SNP Detail
Alliance Variant
Chr19:11076213 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A T A T A A A A A T A A A A A A T A A A A A A A T A T A A
rs37740151
MGI SNP Detail
Alliance Variant
Chr19:11076263 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T T T T T T C T C T C T T C T
rs36494876
MGI SNP Detail
Alliance Variant
Chr19:11076366 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G A A A A A A G A G A G A A G A
rs37116170
MGI SNP Detail
Alliance Variant
Chr19:11076452 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T T T T T T T T C T T T T T T
rs222024911
MGI SNP Detail
Alliance Variant
Chr19:11076486 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238346773
MGI SNP Detail
Alliance Variant
Chr19:11076539 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250597308
MGI SNP Detail
Alliance Variant
Chr19:11076554 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G A G A G G G G G A G G G G G G A G G G G G G A G A G G
rs218017526
MGI SNP Detail
Alliance Variant
Chr19:11076566 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs586535863
MGI SNP Detail
Alliance Variant
Chr19:11076607 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T A T A T T T T T A T T T T T T A T T T T T T A T A T T
rs236903236
MGI SNP Detail
Alliance Variant
Chr19:11076618 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C T C T C C C C C T C C C C C C T C C C C C C T C T C C
rs259164403
MGI SNP Detail
Alliance Variant
Chr19:11076695 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T C T C T T T T T C T T T T T T C T T T T T T T C T C T T
rs234144933
MGI SNP Detail
Alliance Variant
Chr19:11076723 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T C T C T T T T T C T T T T T T C T T T T T T T C T C T T
rs581118316
MGI SNP Detail
Alliance Variant
Chr19:11076759 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs248135493
MGI SNP Detail
Alliance Variant
Chr19:11076781 Ms4a20 Intron
Ms4ac within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs263819034
MGI SNP Detail
Alliance Variant
Chr19:11076800 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230724035
MGI SNP Detail
Alliance Variant
Chr19:11076804 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs246064249
MGI SNP Detail
Alliance Variant
Chr19:11076823 Ms4a20 Intron
Ms4ac within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs255758831
MGI SNP Detail
Alliance Variant
Chr19:11076837 Ms4a20 Intron
Ms4ac within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
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Showing SNP(s) 1 - 100 of 960

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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