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Mouse SNP Summary
Symbol
Name
ID 		Medag
mesenteric estrogen dependent adipogenesis
MGI:1917967

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs38608570
MGI SNP Detail		 Chr5:149333218 Gm20488 within coordinates of
Medag 1996 bp upstream
 SNP A/G A A A A A A A A A G A A G G
rs220690446
MGI SNP Detail		 Chr5:149333448 Gm20488 within coordinates of
Medag 1766 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234482264
MGI SNP Detail		 Chr5:149333453 Gm20488 within coordinates of
Medag 1761 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A G A A G A A G A
rs251175600
MGI SNP Detail		 Chr5:149333455 Gm20488 within coordinates of
Medag 1759 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223440248
MGI SNP Detail		 Chr5:149333459 Gm20488 within coordinates of
Medag 1755 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G C G G G G G C G
rs243836631
MGI SNP Detail		 Chr5:149333563 Gm20488 within coordinates of
Medag 1651 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256106571
MGI SNP Detail		 Chr5:149333634 Gm20488 within coordinates of
Medag 1580 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs226048772
MGI SNP Detail		 Chr5:149333662 Gm20488 within coordinates of
Medag 1552 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs46711194
MGI SNP Detail		 Chr5:149333719 Gm20488 within coordinates of
Medag 1495 bp upstream
 SNP C/G C G C
rs50213563
MGI SNP Detail		 Chr5:149333720 Gm20488 within coordinates of
Medag 1494 bp upstream
 SNP C/T T C T
rs227626415
MGI SNP Detail		 Chr5:149333774 Gm20488 within coordinates of
Medag 1440 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36245886
MGI SNP Detail		 Chr5:149333811 Gm20488 within coordinates of
Medag 1403 bp upstream
 SNP C/T T T T T T T T T T C T T C T
rs265389531
MGI SNP Detail		 Chr5:149333890 Gm20488 within coordinates of
Medag 1324 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228083035
MGI SNP Detail		 Chr5:149333897 Gm20488 within coordinates of
Medag 1317 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G
rs254677244
MGI SNP Detail		 Chr5:149333915 Gm20488 within coordinates of
Medag 1299 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A
rs218382769
MGI SNP Detail		 Chr5:149333937 Gm20488 within coordinates of
Medag 1277 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33218897
MGI SNP Detail		 Chr5:149333993 Gm20488 within coordinates of
Medag 1221 bp upstream
 SNP A/T T T A T A T A T T A T A A T A A
rs248554276
MGI SNP Detail		 Chr5:149334024 Gm20488 within coordinates of
Medag 1190 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G
rs214990368
MGI SNP Detail		 Chr5:149334025 Gm20488 within coordinates of
Medag 1189 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C A C C C C C A C
rs234443836
MGI SNP Detail		 Chr5:149334040 Gm20488 within coordinates of
Medag 1174 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C
rs38175636
MGI SNP Detail		 Chr5:149334047 Gm20488 within coordinates of
Medag 1167 bp upstream
 SNP C/T C C C C C C C C C C T C C T
rs214768425
MGI SNP Detail		 Chr5:149334122 Gm20488 within coordinates of
Medag 1092 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234606519
MGI SNP Detail		 Chr5:149334213 Gm20488 within coordinates of
Medag 1001 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs261548914
MGI SNP Detail		 Chr5:149334306 Gm20488 within coordinates of
Medag 908 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225601457
MGI SNP Detail		 Chr5:149334337 Gm20488 within coordinates of
Medag 877 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37674779
MGI SNP Detail		 Chr5:149334356 Gm20488 within coordinates of
Medag 858 bp upstream
 SNP C/T C C C C C C C C C C T C C T C
rs13478592
MGI SNP Detail		 Chr5:149334371 Gm20488 within coordinates of
Medag 843 bp upstream
 SNP A/C C C A C A C A C C C C C C C C A C C C C A A C C C A C C A A C C C C C C A A C C C A A A
rs221587078
MGI SNP Detail		 Chr5:149334376 Gm20488 within coordinates of
Medag 838 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237649152
MGI SNP Detail		 Chr5:149334406 Gm20488 within coordinates of
Medag 808 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs262790578
MGI SNP Detail		 Chr5:149334416 Gm20488 within coordinates of
Medag 798 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228324017
MGI SNP Detail		 Chr5:149334504 Gm20488 within coordinates of
Medag 710 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs242575182
MGI SNP Detail		 Chr5:149334512 Gm20488 within coordinates of
Medag 702 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs33042839
MGI SNP Detail		 Chr5:149334585 Gm20488 within coordinates of
Medag 629 bp upstream
 SNP C/T C C T C T C T C T C T T C T T
rs229452240
MGI SNP Detail		 Chr5:149334665 Gm20488 within coordinates of
Medag 549 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs246811915
MGI SNP Detail		 Chr5:149334666 Gm20488 within coordinates of
Medag 548 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214954440
MGI SNP Detail		 Chr5:149334745 Gm20488 within coordinates of
Medag 469 bp upstream
Rr625496 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33571770
MGI SNP Detail		 Chr5:149334756 Gm20488 within coordinates of
Medag 458 bp upstream
Rr625496 within coordinates of
 SNP A/G A A G A G A G A A G A G G A G G
rs254967707
MGI SNP Detail		 Chr5:149334771 Gm20488 within coordinates of
Medag 443 bp upstream
Rr625496 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214360253
MGI SNP Detail		 Chr5:149334811 Gm20488 within coordinates of
Medag 403 bp upstream
Rr625496 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs38385972
MGI SNP Detail		 Chr5:149334817 Gm20488 within coordinates of
Medag 397 bp upstream
Rr625496 within coordinates of
 SNP A/G G G G G G G G G G A G G A G
rs29526894
MGI SNP Detail		 Chr5:149334826 Gm20488 within coordinates of
Medag 388 bp upstream
Rr625496 within coordinates of
 SNP A/G G G A A G A G G G A G G A G G G
rs218112432
MGI SNP Detail		 Chr5:149334884 Gm20488 within coordinates of
Medag 330 bp upstream
Rr625496 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs235069090
MGI SNP Detail		 Chr5:149334887 Gm20488 within coordinates of
Medag 327 bp upstream
Rr625496 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs251154187
MGI SNP Detail		 Chr5:149334893 Gm20488 within coordinates of
Medag 321 bp upstream
Rr625496 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221356631
MGI SNP Detail		 Chr5:149334903 Gm20488 within coordinates of
Medag 311 bp upstream
Rr625496 within coordinates of
 SNP A/C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C A C C C C
rs231545869
MGI SNP Detail		 Chr5:149334904 Gm20488 within coordinates of
Medag 310 bp upstream
Rr625496 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262556828
MGI SNP Detail		 Chr5:149334911 Gm20488 within coordinates of
Medag 303 bp upstream
Rr625496 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs38329222
MGI SNP Detail		 Chr5:149334994 Gm20488 within coordinates of
Medag 220 bp upstream
Rr625496 within coordinates of
 SNP C/G C C C C C C C C C G C C G C
rs245144317
MGI SNP Detail		 Chr5:149335040 Gm20488 within coordinates of
Medag 174 bp upstream
Rr625496 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264207369
MGI SNP Detail		 Chr5:149335043 Gm20488 within coordinates of
Medag 171 bp upstream
Rr625496 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223856048
MGI SNP Detail		 Chr5:149335071 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag 143 bp upstream
Rr625496 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs37232145
MGI SNP Detail		 Chr5:149335134 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag 80 bp upstream
Rr625496 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs260149683
MGI SNP Detail
Alliance Variant		 Chr5:149335357 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag mRNA-UTR
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226074650
MGI SNP Detail
Alliance Variant		 Chr5:149335377 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag mRNA-UTR
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250445472
MGI SNP Detail
Alliance Variant		 Chr5:149335397 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag mRNA-UTR
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265235062
MGI SNP Detail
Alliance Variant		 Chr5:149335514 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag Coding-Synonymous
Medag Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs227244611
MGI SNP Detail
Alliance Variant		 Chr5:149335523 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag Coding-Synonymous
Medag Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36515629
MGI SNP Detail
Alliance Variant		 Chr5:149335582 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag Coding-NonSynonymous
Medag Noncoding-Transcript-Variant
Tssr49906 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs216645297
MGI SNP Detail
Alliance Variant		 Chr5:149335598 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag Coding-Synonymous
Medag Noncoding-Transcript-Variant
Tssr49906 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235129897
MGI SNP Detail
Alliance Variant		 Chr5:149335628 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag Coding-Synonymous
Medag Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs29567946
MGI SNP Detail
Alliance Variant		 Chr5:149335639 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag Coding-NonSynonymous
Medag Noncoding-Transcript-Variant
 SNP A/C C A C C
rs215769460
MGI SNP Detail
Alliance Variant		 Chr5:149335643 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag Coding-Synonymous
Medag Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs33457502
MGI SNP Detail
Alliance Variant		 Chr5:149335685 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag Coding-Synonymous
Medag Noncoding-Transcript-Variant
 SNP A/C A A C C C A C A C A C A C A C C
rs38461773
MGI SNP Detail
Alliance Variant		 Chr5:149335747 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C T C C T C
rs220372272
MGI SNP Detail
Alliance Variant		 Chr5:149335758 Cpgi17095 within coordinates of
Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs36712246
MGI SNP Detail
Alliance Variant		 Chr5:149335804 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G A G G A G
rs263765830
MGI SNP Detail
Alliance Variant		 Chr5:149335912 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs223524914
MGI SNP Detail
Alliance Variant		 Chr5:149335935 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240861581
MGI SNP Detail
Alliance Variant		 Chr5:149335991 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs260304705
MGI SNP Detail
Alliance Variant		 Chr5:149336015 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219788365
MGI SNP Detail
Alliance Variant		 Chr5:149336028 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs247224325
MGI SNP Detail
Alliance Variant		 Chr5:149336049 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262666419
MGI SNP Detail
Alliance Variant		 Chr5:149336075 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs227921389
MGI SNP Detail
Alliance Variant		 Chr5:149336110 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs249679560
MGI SNP Detail
Alliance Variant		 Chr5:149336116 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258561193
MGI SNP Detail
Alliance Variant		 Chr5:149336163 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs228948969
MGI SNP Detail
Alliance Variant		 Chr5:149336172 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs245225705
MGI SNP Detail
Alliance Variant		 Chr5:149336176 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215926587
MGI SNP Detail
Alliance Variant		 Chr5:149336276 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs236088302
MGI SNP Detail
Alliance Variant		 Chr5:149336292 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs256173349
MGI SNP Detail
Alliance Variant		 Chr5:149336317 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211941492
MGI SNP Detail
Alliance Variant		 Chr5:149336320 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs237374900
MGI SNP Detail
Alliance Variant		 Chr5:149336469 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs254628706
MGI SNP Detail
Alliance Variant		 Chr5:149336485 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs217458685
MGI SNP Detail
Alliance Variant		 Chr5:149336500 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs234060783
MGI SNP Detail
Alliance Variant		 Chr5:149336520 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs253930081
MGI SNP Detail
Alliance Variant		 Chr5:149336529 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs219929082
MGI SNP Detail
Alliance Variant		 Chr5:149336586 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs244452692
MGI SNP Detail
Alliance Variant		 Chr5:149336590 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs261083333
MGI SNP Detail
Alliance Variant		 Chr5:149336604 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221991106
MGI SNP Detail
Alliance Variant		 Chr5:149336646 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs244715114
MGI SNP Detail
Alliance Variant		 Chr5:149336676 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs258764791
MGI SNP Detail
Alliance Variant		 Chr5:149336698 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs228914791
MGI SNP Detail
Alliance Variant		 Chr5:149336725 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs238919235
MGI SNP Detail
Alliance Variant		 Chr5:149336748 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs258060414
MGI SNP Detail
Alliance Variant		 Chr5:149336801 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs230129124
MGI SNP Detail
Alliance Variant		 Chr5:149336805 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs251493283
MGI SNP Detail
Alliance Variant		 Chr5:149336823 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs212022246
MGI SNP Detail
Alliance Variant		 Chr5:149336824 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs228627734
MGI SNP Detail
Alliance Variant		 Chr5:149336841 Gm20488 within coordinates of
Medag Intron
Medag Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory