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Mouse SNP Summary
Symbol
Name
ID
Gtf2a1l
general transcription factor IIA, 1-like
MGI:1919078

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs107746996
MGI SNP Detail
Alliance Variant
Chr17:88974090 Gtf2a1l Intron
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs108128875
MGI SNP Detail
Alliance Variant
Chr17:88974109 Gtf2a1l Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs107995851
MGI SNP Detail
Alliance Variant
Chr17:88974118 Gtf2a1l Intron
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs108835772
MGI SNP Detail
Alliance Variant
Chr17:88974155 Gtf2a1l Intron
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs108677946
MGI SNP Detail
Alliance Variant
Chr17:88974156 Gtf2a1l Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs107832773
MGI SNP Detail
Alliance Variant
Chr17:88974186 Gtf2a1l Intron
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs108784151
MGI SNP Detail
Alliance Variant
Chr17:88974233 Gtf2a1l Intron
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219632719
MGI SNP Detail
Alliance Variant
Chr17:88974259 Gtf2a1l Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs107613045
MGI SNP Detail
Alliance Variant
Chr17:88974335 Gtf2a1l Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255575983
MGI SNP Detail
Alliance Variant
Chr17:88974661 Gtf2a1l Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C C T T T T T T C C C T T T C C T T T
rs221250964
MGI SNP Detail
Alliance Variant
Chr17:88974682 Gtf2a1l Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108528875
MGI SNP Detail
Alliance Variant
Chr17:88974711 Gtf2a1l Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G G A A A A A A G G G A A A A G G A A A
rs260114106
MGI SNP Detail
Alliance Variant
Chr17:88974783 Gtf2a1l Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227118940
MGI SNP Detail
Alliance Variant
Chr17:88974850 Gtf2a1l Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs240406730
MGI SNP Detail
Alliance Variant
Chr17:88974876 Gtf2a1l Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A A G G G G G G A A A G G G G G A G G G
rs255861759
MGI SNP Detail
Alliance Variant
Chr17:88974957 Gtf2a1l Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs107752901
MGI SNP Detail
Alliance Variant
Chr17:88974984 Gtf2a1l Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs108356760
MGI SNP Detail
Alliance Variant
Chr17:88974985 Gtf2a1l Intron
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs107820980
MGI SNP Detail
Alliance Variant
Chr17:88975040 Gtf2a1l Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs108432284
MGI SNP Detail
Alliance Variant
Chr17:88975089 Gtf2a1l Intron
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587570434
MGI SNP Detail
Alliance Variant
Chr17:88975122 Gtf2a1l Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A A G G G G G G A A G G G G G A G G G
rs108274513
MGI SNP Detail
Alliance Variant
Chr17:88975234 Gtf2a1l Intron
SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217273471
MGI SNP Detail
Alliance Variant
Chr17:88975236 Gtf2a1l Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T T C C C C C C T T T C C C C C T C C C
rs233821633
MGI SNP Detail
Alliance Variant
Chr17:88975254 Gtf2a1l Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108542992
MGI SNP Detail
Alliance Variant
Chr17:88975296 Gtf2a1l Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C C T T T T T T C C C T T T T C C T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213586609
MGI SNP Detail
Alliance Variant
Chr17:88975345 Gtf2a1l Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G G A A A A A A G G G A A A A A G A A A
rs108278318
MGI SNP Detail
Alliance Variant
Chr17:88975386 Gtf2a1l Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs108832654
MGI SNP Detail
Alliance Variant
Chr17:88975421 Gtf2a1l Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33347974
MGI SNP Detail
Alliance Variant
Chr17:88975471 Gtf2a1l Intron
SNP C/T T C
rs108314606
MGI SNP Detail
Alliance Variant
Chr17:88975479 Gtf2a1l Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253370580
MGI SNP Detail
Alliance Variant
Chr17:88975503 Gtf2a1l Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108309061
MGI SNP Detail
Alliance Variant
Chr17:88975520 Gtf2a1l Intron
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C A A C C C C C C A A A C C C C C A C C C
rs240267369
MGI SNP Detail
Alliance Variant
Chr17:88975579 Gtf2a1l Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255706217
MGI SNP Detail
Alliance Variant
Chr17:88975595 Gtf2a1l Intron
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs581614976
MGI SNP Detail
Alliance Variant
Chr17:88975610 Gtf2a1l Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T T C C C C C C T T T C C C C C T C C C
rs585042011
MGI SNP Detail
Alliance Variant
Chr17:88975636 Gtf2a1l Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs223572537
MGI SNP Detail
Alliance Variant
Chr17:88975700 Gtf2a1l Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241674246
MGI SNP Detail
Alliance Variant
Chr17:88975705 Gtf2a1l Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs107620223
MGI SNP Detail
Alliance Variant
Chr17:88975730 Gtf2a1l Intron
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G G T T T T T T G G G T T T T G G T T T
rs107601545
MGI SNP Detail
Alliance Variant
Chr17:88975731 Gtf2a1l Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C C T T T T T T C C C T T T T C C T T T
rs247785155
MGI SNP Detail
Alliance Variant
Chr17:88975795 Gtf2a1l Intron
SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C G G C C T C C T G G G C C C C C G C C C
rs108593445
MGI SNP Detail
Alliance Variant
Chr17:88975804 Gtf2a1l Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G G A A A A A A G G G A A A A G G A A A
rs108718852
MGI SNP Detail
Alliance Variant
Chr17:88975822 Gtf2a1l Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G G A A A A A A G G G A A A A G G A A A
rs48204557
MGI SNP Detail
Alliance Variant
Chr17:88975845 Gtf2a1l Intron
SNP A/G A A A A A A A A A G G A A A
rs581058587
MGI SNP Detail
Alliance Variant
Chr17:88975887 Gtf2a1l Intron
Rr532918 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G G C C C C C C G G G C C C C C G C C C
rs213552360
MGI SNP Detail
Alliance Variant
Chr17:88975928 Cpgi9645 within coordinates of
Gtf2a1l Intron
Rr532918 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108526506
MGI SNP Detail
Alliance Variant
Chr17:88975930 Cpgi9645 within coordinates of
Gtf2a1l Intron
Rr532918 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C C T T T T T T C C C T T T T C C T T T
rs249142916
MGI SNP Detail
Alliance Variant
Chr17:88975940 Cpgi9645 within coordinates of
Gtf2a1l Intron
Rr532918 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213334829
MGI SNP Detail
Alliance Variant
Chr17:88975944 Cpgi9645 within coordinates of
Gtf2a1l Intron
Rr532918 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C C T T T T T T C C C T T T T C C T T T
rs239607920
MGI SNP Detail
Alliance Variant
Chr17:88975950 Cpgi9645 within coordinates of
Gtf2a1l Intron
Rr532918 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A A G G G G G G A A A G G G G A A G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253261161
MGI SNP Detail
Alliance Variant
Chr17:88975951 Cpgi9645 within coordinates of
Gtf2a1l Intron
Rr532918 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G G T T T T T T G G G T T T T G G T T T
rs107622981
MGI SNP Detail
Alliance Variant
Chr17:88975987 Cpgi9645 within coordinates of
Gtf2a1l Intron
Rr532918 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs50114601
MGI SNP Detail
Alliance Variant
Chr17:88976065 Cpgi9645 within coordinates of
Gtf2a1l Intron
Rr532918 within coordinates of
SNP C/G G G G G G G G G C C G G G
rs578550536
MGI SNP Detail
Alliance Variant
Chr17:88976441 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580883008
MGI SNP Detail
Alliance Variant
Chr17:88976443 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs107632313
MGI SNP Detail
Alliance Variant
Chr17:88976527 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs108344996
MGI SNP Detail
Alliance Variant
Chr17:88976570 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs107743838
MGI SNP Detail
Alliance Variant
Chr17:88976600 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C C G G G G G G C C C G G G G C C G G G
rs262176936
MGI SNP Detail
Alliance Variant
Chr17:88976615 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108209316
MGI SNP Detail
Alliance Variant
Chr17:88976644 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T T C C C C C C T T T C C C C T T C C C
rs108779327
MGI SNP Detail
Alliance Variant
Chr17:88976700 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261018888
MGI SNP Detail
Alliance Variant
Chr17:88976721 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs227108173
MGI SNP Detail
Alliance Variant
Chr17:88976748 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241090529
MGI SNP Detail
Alliance Variant
Chr17:88976752 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs265034926
MGI SNP Detail
Alliance Variant
Chr17:88976793 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230808111
MGI SNP Detail
Alliance Variant
Chr17:88976809 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T T C C C C C C T T T C C C C C T C C C
rs107936061
MGI SNP Detail
Alliance Variant
Chr17:88976815 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G G T T T T T T G G G T T T T G G T T T
rs107684395
MGI SNP Detail
Alliance Variant
Chr17:88976853 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C G G C C C C C C G G G C C C C C G C C C
rs228386408
MGI SNP Detail
Alliance Variant
Chr17:88976867 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G G A A A A A A G G G A A A A A G A A A
rs584234780
MGI SNP Detail
Alliance Variant
Chr17:88976942 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs107744336
MGI SNP Detail
Alliance Variant
Chr17:88977033 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G G A A A A A A G G G A A A A G G A A A
rs108594663
MGI SNP Detail
Alliance Variant
Chr17:88977051 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A A T T T T T T A A A T T T T A A T T T
rs107669765
MGI SNP Detail
Alliance Variant
Chr17:88977095 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G G C C C C C C G G G C C C C G G C C C
rs107918738
MGI SNP Detail
Alliance Variant
Chr17:88977113 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C C T T T T T T C C C T T T T C C T T T
rs579381577
MGI SNP Detail
Alliance Variant
Chr17:88977114 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215487702
MGI SNP Detail
Alliance Variant
Chr17:88977130 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T T C C C C C C T T T C C C C C T C C C
rs234986286
MGI SNP Detail
Alliance Variant
Chr17:88977139 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261721730
MGI SNP Detail
Alliance Variant
Chr17:88977177 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T C C T C C C C C C C C C C C C C C C C C C C C T C T C C T C C C C C C C
rs33547425
MGI SNP Detail
Chr17:88977179 Gtf2a1l within coordinates of
SNP C/T T T C C
rs226134854
MGI SNP Detail
Alliance Variant
Chr17:88977180 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T T T T T T C T T C C T C C C C C C C T C C C C C C C C T C T C C T C T C C C C
rs243140017
MGI SNP Detail
Alliance Variant
Chr17:88977190 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs254894547
MGI SNP Detail
Alliance Variant
Chr17:88977195 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G T T G G G G G G T T T G G G T T G G G
rs108778175
MGI SNP Detail
Alliance Variant
Chr17:88977210 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A A G G G G G G A A A G G G G A A G G G
rs241058345
MGI SNP Detail
Alliance Variant
Chr17:88977274 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C T T T C C C C C T C C C
rs262279746
MGI SNP Detail
Alliance Variant
Chr17:88977278 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108433509
MGI SNP Detail
Alliance Variant
Chr17:88977280 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C C T T T T T T C C C T T T T T C T T T
rs49421184
MGI SNP Detail
Alliance Variant
Chr17:88977311 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP A/T A A A A A A A T T A A A
rs108228379
MGI SNP Detail
Alliance Variant
Chr17:88977312 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228330285
MGI SNP Detail
Alliance Variant
Chr17:88977404 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
Rr532920 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108858190
MGI SNP Detail
Alliance Variant
Chr17:88977447 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
Rr532920 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G G A A A A A A G G G A A A A A G A A A
rs215237257
MGI SNP Detail
Alliance Variant
Chr17:88977472 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
Rr532920 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227682108
MGI SNP Detail
Alliance Variant
Chr17:88977475 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
Rr532920 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255461646
MGI SNP Detail
Alliance Variant
Chr17:88977487 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
Rr532920 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108934653
MGI SNP Detail
Alliance Variant
Chr17:88977589 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
Rr532920 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs236486109
MGI SNP Detail
Alliance Variant
Chr17:88977665 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
Rr532920 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T T C C C C C C T T T C C C C T T C C C
rs107954749
MGI SNP Detail
Alliance Variant
Chr17:88977743 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
Rr532920 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T T C C C C C C T T T C C C C C T C C C
rs107999826
MGI SNP Detail
Alliance Variant
Chr17:88977764 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
Rr532920 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A A G G G G G G A A A G G G G G A G G G
rs108104836
MGI SNP Detail
Alliance Variant
Chr17:88977770 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
Rr532920 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T T G G G G G G T T T G G G G G T G G G
rs585814275
MGI SNP Detail
Alliance Variant
Chr17:88977816 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T C C C
rs579049744
MGI SNP Detail
Alliance Variant
Chr17:88977856 Gtf2a1l Intron
Gtf2a1l Noncoding-Transcript-Variant
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory