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Mouse SNP Summary
Symbol
Name
ID 		Gpn1
GPN-loop GTPase 1
MGI:1921504

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246558951
MGI SNP Detail		 Chr5:31650089 4930566F21Rik within coordinates of
Gpn1 1996 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32418223
MGI SNP Detail		 Chr5:31650123 4930566F21Rik within coordinates of
Gpn1 1962 bp upstream
 SNP C/T T T T T T T T C T C
rs230906598
MGI SNP Detail		 Chr5:31650129 4930566F21Rik within coordinates of
Gpn1 1956 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32418220
MGI SNP Detail		 Chr5:31650379 4930566F21Rik within coordinates of
Gpn1 1706 bp upstream
 SNP C/T T T T T T T T T T T C T T C T
rs223284496
MGI SNP Detail		 Chr5:31650409 4930566F21Rik within coordinates of
Gpn1 1676 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A
rs236241150
MGI SNP Detail		 Chr5:31650450 4930566F21Rik within coordinates of
Gpn1 1635 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs263572746
MGI SNP Detail		 Chr5:31650542 4930566F21Rik within coordinates of
Gpn1 1543 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221336462
MGI SNP Detail		 Chr5:31650616 4930566F21Rik within coordinates of
Gpn1 1469 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T C
rs243044537
MGI SNP Detail		 Chr5:31650636 4930566F21Rik within coordinates of
Gpn1 1449 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260878882
MGI SNP Detail		 Chr5:31650890 4930566F21Rik within coordinates of
Gpn1 1195 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs219099037
MGI SNP Detail		 Chr5:31650913 4930566F21Rik within coordinates of
Gpn1 1172 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs243778713
MGI SNP Detail		 Chr5:31650919 4930566F21Rik within coordinates of
Gpn1 1166 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262666420
MGI SNP Detail		 Chr5:31650923 4930566F21Rik within coordinates of
Gpn1 1162 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46114535
MGI SNP Detail		 Chr5:31651080 4930566F21Rik within coordinates of
Gpn1 1005 bp upstream
 SNP G G
rs229811195
MGI SNP Detail		 Chr5:31651107 4930566F21Rik within coordinates of
Gpn1 978 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252766523
MGI SNP Detail		 Chr5:31651108 4930566F21Rik within coordinates of
Gpn1 977 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs586198222
MGI SNP Detail		 Chr5:31651156 4930566F21Rik within coordinates of
Gpn1 929 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580786791
MGI SNP Detail		 Chr5:31651159 4930566F21Rik within coordinates of
Gpn1 926 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584780550
MGI SNP Detail		 Chr5:31651191 4930566F21Rik within coordinates of
Gpn1 894 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32418218
MGI SNP Detail		 Chr5:31651266 4930566F21Rik within coordinates of
Gpn1 819 bp upstream
 SNP C/T T T T T T T C T T T C T T C T
rs229235767
MGI SNP Detail		 Chr5:31651267 4930566F21Rik within coordinates of
Gpn1 818 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs246664739
MGI SNP Detail		 Chr5:31651333 4930566F21Rik within coordinates of
Gpn1 752 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32418216
MGI SNP Detail		 Chr5:31651365 4930566F21Rik within coordinates of
Gpn1 720 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs229809272
MGI SNP Detail		 Chr5:31651500 4930566F21Rik within coordinates of
Gpn1 585 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs32418214
MGI SNP Detail		 Chr5:31651541 4930566F21Rik within coordinates of
Gpn1 544 bp upstream
 SNP A/C A A A A A A A A A A C A A C A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214938541
MGI SNP Detail		 Chr5:31651568 4930566F21Rik within coordinates of
Gpn1 517 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs32417541
MGI SNP Detail		 Chr5:31651569 4930566F21Rik within coordinates of
Gpn1 516 bp upstream
 SNP A/G A A A A A A G A A A G A A G
rs32417538
MGI SNP Detail		 Chr5:31651714 4930566F21Rik within coordinates of
Gpn1 371 bp upstream
Rr609208 within coordinates of
 SNP C/G G G G G G G G G G G C G G C G
rs221060512
MGI SNP Detail		 Chr5:31651717 4930566F21Rik within coordinates of
Gpn1 368 bp upstream
Rr609208 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs236780842
MGI SNP Detail		 Chr5:31651720 4930566F21Rik within coordinates of
Gpn1 365 bp upstream
Rr609208 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32417535
MGI SNP Detail		 Chr5:31651777 4930566F21Rik within coordinates of
Gpn1 308 bp upstream
Rr609208 within coordinates of
 SNP C/T C C C C C C C C C C T C C
rs219110993
MGI SNP Detail		 Chr5:31651794 4930566F21Rik within coordinates of
Gpn1 291 bp upstream
Rr609208 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G G
rs241536302
MGI SNP Detail		 Chr5:31651805 4930566F21Rik within coordinates of
Gpn1 280 bp upstream
Rr399021 within coordinates of
Rr609208 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs262347269
MGI SNP Detail		 Chr5:31651816 4930566F21Rik within coordinates of
Gpn1 269 bp upstream
Rr399021 within coordinates of
Rr609208 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T C
rs579313849
MGI SNP Detail		 Chr5:31651845 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 240 bp upstream
Rr399021 within coordinates of
Rr609208 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581274716
MGI SNP Detail		 Chr5:31651850 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 235 bp upstream
Rr399021 within coordinates of
Rr609208 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs32416822
MGI SNP Detail		 Chr5:31651856 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 229 bp upstream
Rr399021 within coordinates of
Rr609208 within coordinates of
 SNP C/G C C C C C C C C C G C C G C
rs222325874
MGI SNP Detail		 Chr5:31651930 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 155 bp upstream
Rr399021 within coordinates of
Rr609208 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32416819
MGI SNP Detail		 Chr5:31651931 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 154 bp upstream
Rr399021 within coordinates of
Rr609208 within coordinates of
 SNP G/T T T T T T T T G T G
rs256880132
MGI SNP Detail		 Chr5:31652029 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 56 bp upstream
Rr399021 within coordinates of
Rr609208 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32416816
MGI SNP Detail
Alliance Variant		 Chr5:31652090 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 mRNA-UTR
Rr399021 within coordinates of
Rr609208 within coordinates of
Tssr45712 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs240816241
MGI SNP Detail
Alliance Variant		 Chr5:31652130 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Coding-NonSynonymous
Gpn1 mRNA-UTR
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T C T T T C
rs254598138
MGI SNP Detail
Alliance Variant		 Chr5:31652140 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Coding-Synonymous
Gpn1 mRNA-UTR
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C G C C C C C C G C C C C C C G C C C G
rs223429244
MGI SNP Detail
Alliance Variant		 Chr5:31652156 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Coding-NonSynonymous
Gpn1 mRNA-UTR
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C G C C C C C C G C C C C C C G C C C G
rs251375746
MGI SNP Detail
Alliance Variant		 Chr5:31652232 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
Gpn1 Splice-Site
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32416053
MGI SNP Detail
Alliance Variant		 Chr5:31652244 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
 SNP A/G A A A A A A G A A A G A A A
rs32416050
MGI SNP Detail
Alliance Variant		 Chr5:31652261 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
 SNP A/C C C C C C C C C C C A C C A C
rs258431200
MGI SNP Detail
Alliance Variant		 Chr5:31652263 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215266351
MGI SNP Detail
Alliance Variant		 Chr5:31652304 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236408384
MGI SNP Detail
Alliance Variant		 Chr5:31652328 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254870735
MGI SNP Detail
Alliance Variant		 Chr5:31652339 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs213235288
MGI SNP Detail
Alliance Variant		 Chr5:31652386 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32416047
MGI SNP Detail
Alliance Variant		 Chr5:31652408 4930566F21Rik within coordinates of
Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
Gpn1 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A G A A G A
rs258149273
MGI SNP Detail
Alliance Variant		 Chr5:31652579 Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
Gpn1 Noncoding-Transcript-Variant
Rr609209 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A T
rs579101717
MGI SNP Detail
Alliance Variant		 Chr5:31652624 Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
Gpn1 Noncoding-Transcript-Variant
Rr609209 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A
rs222429182
MGI SNP Detail
Alliance Variant		 Chr5:31652677 Cpgi15713 within coordinates of
Gpn1 Intron
Gpn1 mRNA-UTR
Gpn1 Noncoding-Transcript-Variant
Rr609209 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246109274
MGI SNP Detail
Alliance Variant		 Chr5:31652753 Gpn1 Intron
Gpn1 mRNA-UTR
Gpn1 Noncoding-Transcript-Variant
Rr609209 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32416044
MGI SNP Detail
Alliance Variant		 Chr5:31652791 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
Rr609209 within coordinates of
 SNP A/G G G G G G G G G G A G G G
rs222418030
MGI SNP Detail
Alliance Variant		 Chr5:31652900 Gpn1 Coding-Synonymous
Gpn1 mRNA-UTR
Gpn1 Noncoding-Transcript-Variant
Rr609209 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240502865
MGI SNP Detail
Alliance Variant		 Chr5:31652905 Gpn1 Coding-NonSynonymous
Gpn1 mRNA-UTR
Gpn1 Noncoding-Transcript-Variant
Rr609209 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254635465
MGI SNP Detail
Alliance Variant		 Chr5:31653088 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227585271
MGI SNP Detail
Alliance Variant		 Chr5:31653098 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs246812374
MGI SNP Detail
Alliance Variant		 Chr5:31653108 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs262314883
MGI SNP Detail
Alliance Variant		 Chr5:31653157 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32415351
MGI SNP Detail
Alliance Variant		 Chr5:31653231 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G A A A A A A G A A A G A A G A
rs32415348
MGI SNP Detail
Alliance Variant		 Chr5:31653258 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C A C C C
rs215345793
MGI SNP Detail
Alliance Variant		 Chr5:31653294 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs32415345
MGI SNP Detail
Alliance Variant		 Chr5:31653324 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G A G G A G
rs248073604
MGI SNP Detail
Alliance Variant		 Chr5:31653325 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs212922378
MGI SNP Detail
Alliance Variant		 Chr5:31653329 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235070161
MGI SNP Detail
Alliance Variant		 Chr5:31653373 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262639976
MGI SNP Detail
Alliance Variant		 Chr5:31653374 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214148888
MGI SNP Detail
Alliance Variant		 Chr5:31653551 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs241438731
MGI SNP Detail
Alliance Variant		 Chr5:31653552 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251060219
MGI SNP Detail
Alliance Variant		 Chr5:31653561 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222449796
MGI SNP Detail
Alliance Variant		 Chr5:31653569 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234017623
MGI SNP Detail
Alliance Variant		 Chr5:31653582 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs248637111
MGI SNP Detail
Alliance Variant		 Chr5:31653594 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs219652659
MGI SNP Detail
Alliance Variant		 Chr5:31653624 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244104052
MGI SNP Detail
Alliance Variant		 Chr5:31653632 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265052210
MGI SNP Detail
Alliance Variant		 Chr5:31653641 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T
rs224898517
MGI SNP Detail
Alliance Variant		 Chr5:31653658 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs240388259
MGI SNP Detail
Alliance Variant		 Chr5:31653668 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259325161
MGI SNP Detail
Alliance Variant		 Chr5:31653721 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32414492
MGI SNP Detail
Alliance Variant		 Chr5:31653764 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/T T T T T T A T T T A T T A T
rs248148165
MGI SNP Detail
Alliance Variant		 Chr5:31653777 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261987121
MGI SNP Detail
Alliance Variant		 Chr5:31653809 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228211249
MGI SNP Detail
Alliance Variant		 Chr5:31653840 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251912090
MGI SNP Detail
Alliance Variant		 Chr5:31653853 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs214626688
MGI SNP Detail
Alliance Variant		 Chr5:31653866 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs233845626
MGI SNP Detail
Alliance Variant		 Chr5:31653890 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245497070
MGI SNP Detail
Alliance Variant		 Chr5:31653898 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217488256
MGI SNP Detail
Alliance Variant		 Chr5:31653947 Gpn1 Coding-NonSynonymous
Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234098225
MGI SNP Detail
Alliance Variant		 Chr5:31653987 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
Gpn1 Splice-Site
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs248660755
MGI SNP Detail
Alliance Variant		 Chr5:31654062 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs219916779
MGI SNP Detail
Alliance Variant		 Chr5:31654065 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs238690635
MGI SNP Detail
Alliance Variant		 Chr5:31654079 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs32414489
MGI SNP Detail
Alliance Variant		 Chr5:31654104 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/C A A C A C A C C C C C C C C C C
rs225146363
MGI SNP Detail
Alliance Variant		 Chr5:31654106 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs240478074
MGI SNP Detail
Alliance Variant		 Chr5:31654130 Gpn1 Intron
Gpn1 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 100 of 721
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory