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Mouse SNP Summary
Symbol
Name
ID 		Spatc1
spermatogenesis and centriole associated 1
MGI:1921531

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235635259
MGI SNP Detail		 Chr15:76150332 Spatc1 1957 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248694283
MGI SNP Detail		 Chr15:76150375 Spatc1 1914 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221863848
MGI SNP Detail		 Chr15:76150406 Rr307809 within coordinates of
Spatc1 1883 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243871734
MGI SNP Detail		 Chr15:76150408 Rr307809 within coordinates of
Spatc1 1881 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265462433
MGI SNP Detail		 Chr15:76150452 Rr307809 within coordinates of
Spatc1 1837 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224854500
MGI SNP Detail		 Chr15:76150463 Rr307809 within coordinates of
Spatc1 1826 bp upstream
 SNP C/T T T T T T C T T T T T T T T T T T T T C T T C T T T T C T T T T C C C C T T T T C C C T C T T T C T T C C
rs241936801
MGI SNP Detail		 Chr15:76150465 Rr307809 within coordinates of
Spatc1 1824 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261282326
MGI SNP Detail		 Chr15:76150479 Rr307809 within coordinates of
Spatc1 1810 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs229292335
MGI SNP Detail		 Chr15:76150552 Rr307809 within coordinates of
Spatc1 1737 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G A G G G G G G G G G G G G
rs243622244
MGI SNP Detail		 Chr15:76150554 Rr307809 within coordinates of
Spatc1 1735 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs230384171
MGI SNP Detail		 Chr15:76150580 Rr307809 within coordinates of
Spatc1 1709 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251703517
MGI SNP Detail		 Chr15:76150651 Rr307809 within coordinates of
Spatc1 1638 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216458190
MGI SNP Detail		 Chr15:76150688 Rr307809 within coordinates of
Spatc1 1601 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G A A G G G G G G A G G G G G G G A G G G G
rs238967994
MGI SNP Detail		 Chr15:76150742 Gm62154 within coordinates of
Rr307809 within coordinates of
Spatc1 1547 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247041052
MGI SNP Detail		 Chr15:76150796 Gm62154 within coordinates of
Rr307809 within coordinates of
Spatc1 1493 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217637610
MGI SNP Detail		 Chr15:76150852 Gm62154 within coordinates of
Spatc1 1437 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229635722
MGI SNP Detail		 Chr15:76150853 Gm62154 within coordinates of
Spatc1 1436 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248591454
MGI SNP Detail		 Chr15:76150882 Gm62154 within coordinates of
Spatc1 1407 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A A G A G G G G G G G G
rs46619809
MGI SNP Detail		 Chr15:76151041 Mirt2 within coordinates of
Spatc1 1248 bp upstream
 SNP A/G A A A A A A G A A A A A A A A
rs46950723
MGI SNP Detail		 Chr15:76151051 Mirt2 within coordinates of
Spatc1 1238 bp upstream
 SNP A/G A A A A A A A A A A A A A A G
rs50005979
MGI SNP Detail		 Chr15:76151108 Mirt2 within coordinates of
Spatc1 1181 bp upstream
 SNP A/G G G G G G G A G G G G G G A
rs225028994
MGI SNP Detail		 Chr15:76151147 Mirt2 within coordinates of
Spatc1 1142 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241925483
MGI SNP Detail		 Chr15:76151161 Mirt2 within coordinates of
Spatc1 1128 bp upstream
Tssr131755 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G A G G G G G G G G G G G G
rs261233740
MGI SNP Detail		 Chr15:76151172 Mirt2 within coordinates of
Spatc1 1117 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218165411
MGI SNP Detail		 Chr15:76151266 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 1023 bp upstream
 SNP A/G A A A A A G A A A A A A A A A A A A A G A A G A A A A G A G A A G G G G A A A A G G G A G A A A G A A G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238053407
MGI SNP Detail		 Chr15:76151368 Gm55515 within coordinates of
Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 921 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264874129
MGI SNP Detail		 Chr15:76151386 Gm55515 within coordinates of
Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 903 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230054890
MGI SNP Detail		 Chr15:76151453 Gm55515 within coordinates of
Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 836 bp upstream
 SNP C/T C C C C C T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C C C C T T
rs256451968
MGI SNP Detail		 Chr15:76151476 Gm55515 within coordinates of
Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 813 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs263287038
MGI SNP Detail		 Chr15:76151496 Gm55515 within coordinates of
Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 793 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227820977
MGI SNP Detail		 Chr15:76151498 Gm55515 within coordinates of
Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 791 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246981700
MGI SNP Detail		 Chr15:76151548 Gm55515 within coordinates of
Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 741 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217519186
MGI SNP Detail		 Chr15:76151565 Gm55515 within coordinates of
Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 724 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T C C T T T T T T C T T T T T T T C T T T T
rs230311269
MGI SNP Detail		 Chr15:76151611 Gm55515 within coordinates of
Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 678 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243427866
MGI SNP Detail		 Chr15:76151616 Gm55515 within coordinates of
Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 673 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G A G G G G G G G G G G G G
rs213770878
MGI SNP Detail		 Chr15:76151739 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 550 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A C C A C A A A A A A A A
rs236704838
MGI SNP Detail		 Chr15:76151910 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 379 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262771242
MGI SNP Detail		 Chr15:76152003 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 286 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224784887
MGI SNP Detail		 Chr15:76152034 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 255 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235416058
MGI SNP Detail		 Chr15:76152040 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 249 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255101734
MGI SNP Detail		 Chr15:76152047 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 242 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218066544
MGI SNP Detail		 Chr15:76152074 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 215 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237991981
MGI SNP Detail		 Chr15:76152093 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 196 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257067352
MGI SNP Detail		 Chr15:76152116 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 173 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222197417
MGI SNP Detail		 Chr15:76152258 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 31 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs47805176
MGI SNP Detail		 Chr15:76152263 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 26 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs265545244
MGI SNP Detail		 Chr15:76152305 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227697893
MGI SNP Detail		 Chr15:76152452 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241013873
MGI SNP Detail		 Chr15:76152476 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260100511
MGI SNP Detail		 Chr15:76152736 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223734290
MGI SNP Detail		 Chr15:76152792 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254656007
MGI SNP Detail		 Chr15:76152828 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214319551
MGI SNP Detail		 Chr15:76152968 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C A A C C C C C C A C C C C C C A C C C C
rs230756179
MGI SNP Detail		 Chr15:76153068 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs51321367
MGI SNP Detail		 Chr15:76153143 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G G G G G G G A G G G A G G A
rs215620015
MGI SNP Detail		 Chr15:76153161 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G A G G G G G G G G G G G G
rs235326112
MGI SNP Detail		 Chr15:76153300 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255039185
MGI SNP Detail		 Chr15:76153307 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs211900166
MGI SNP Detail		 Chr15:76153377 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49332032
MGI SNP Detail		 Chr15:76153378 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G A A A A A A G A A A A A A
rs262002048
MGI SNP Detail		 Chr15:76153379 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs223419562
MGI SNP Detail		 Chr15:76153402 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246945960
MGI SNP Detail		 Chr15:76153405 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258687890
MGI SNP Detail		 Chr15:76153419 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221486281
MGI SNP Detail		 Chr15:76153435 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240960622
MGI SNP Detail		 Chr15:76153465 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T T T T C T T T T T T T T T T T T
rs260088129
MGI SNP Detail		 Chr15:76153492 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223719795
MGI SNP Detail		 Chr15:76153533 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs242535151
MGI SNP Detail		 Chr15:76153569 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265166777
MGI SNP Detail		 Chr15:76153593 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C G G C C C C C C G C C C C C C C C C C C C
rs231229244
MGI SNP Detail		 Chr15:76153600 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/G C C C C C G C C C C C C C C C C C C C G C C G C C C C G C C C C G G G G C C C C G G G C G C C C G C C G G
rs257766482
MGI SNP Detail		 Chr15:76153737 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C T C C C C C C C C C C C C
rs46083135
MGI SNP Detail		 Chr15:76153915 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP G/T G G G G G T
rs215571214
MGI SNP Detail		 Chr15:76153917 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G G G G G G A G G G G G G G G G G G G G G G G A G G G G G G G G G G G A A G G G G G A A G A G G G G G G A A
rs582194840
MGI SNP Detail		 Chr15:76153928 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228372163
MGI SNP Detail		 Chr15:76154008 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248565415
MGI SNP Detail		 Chr15:76154019 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs211890477
MGI SNP Detail		 Chr15:76154021 Mirt2 within coordinates of
Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs237085525
MGI SNP Detail		 Chr15:76154057 Rr314304 within coordinates of
Spatc1 within coordinates of
Tssr134969 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250620213
MGI SNP Detail		 Chr15:76154058 Rr314304 within coordinates of
Spatc1 within coordinates of
Tssr134969 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T C C T T T T T T C T T T T T T T C T T T T
rs215012783
MGI SNP Detail		 Chr15:76154102 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C T C C C C C C C T C C C C
rs237803496
MGI SNP Detail		 Chr15:76154319 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251926333
MGI SNP Detail		 Chr15:76154411 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221478548
MGI SNP Detail		 Chr15:76154420 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234476211
MGI SNP Detail		 Chr15:76154522 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584510937
MGI SNP Detail		 Chr15:76154644 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/C C C C C C A C C C C C C C C C C C C C C C C A C C C C A C C C C A C A A C C C C C A A C A C C C A C C A A
rs578421395
MGI SNP Detail		 Chr15:76154647 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/C C C C C C A C C C C C C C C C C C C C A C C A C C C C A C C C C A A A A C C C C A A A C A C C C A C C A A
rs253324185
MGI SNP Detail		 Chr15:76154667 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T T T T C T T T T T T T T T T T T
rs218141914
MGI SNP Detail		 Chr15:76154696 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs45756747
MGI SNP Detail		 Chr15:76154712 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T C C C C C C T C C C C C C C C
rs262499634
MGI SNP Detail		 Chr15:76154735 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223455190
MGI SNP Detail		 Chr15:76154745 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245743354
MGI SNP Detail		 Chr15:76154895 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260325288
MGI SNP Detail		 Chr15:76154927 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G A A A A A G A A A A A A A A A A A A A G A A G A A A A G A A A A G G G G A A A A G G G A G A A A G A A G G
rs228365854
MGI SNP Detail		 Chr15:76154948 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248505400
MGI SNP Detail		 Chr15:76155022 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255806727
MGI SNP Detail		 Chr15:76155091 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T T T T C T T T T T T T T T T T T
rs228405856
MGI SNP Detail		 Chr15:76155117 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254962856
MGI SNP Detail		 Chr15:76155132 Rr314304 within coordinates of
Spatc1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs214571068
MGI SNP Detail		 Chr15:76155140 Rr314304 within coordinates of
Spatc1 within coordinates of
Tssr131757 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 744
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory