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Mouse SNP Summary
Symbol
Name
ID 		Garin5a
golgi associated RAB2 interactor 5A
MGI:1922788

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245500107
MGI SNP Detail
Alliance Variant		 Chr7:44144015 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1990 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253596689
MGI SNP Detail
Alliance Variant		 Chr7:44144049 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1956 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs52411683
MGI SNP Detail
Alliance Variant		 Chr7:44144062 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1943 bp upstream
 SNP C/T T C T T C
rs37404373
MGI SNP Detail
Alliance Variant		 Chr7:44144103 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1902 bp upstream
 SNP A/G G A A G A A G A G A G G A A
rs257865923
MGI SNP Detail
Alliance Variant		 Chr7:44144159 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1846 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231905767
MGI SNP Detail
Alliance Variant		 Chr7:44144166 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1839 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254586705
MGI SNP Detail
Alliance Variant		 Chr7:44144182 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1823 bp upstream
 SNP A/G/T G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G T G G G G
rs217997729
MGI SNP Detail
Alliance Variant		 Chr7:44144222 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1783 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228702543
MGI SNP Detail
Alliance Variant		 Chr7:44144235 Emc10 Coding-NonSynonymous
Emc10 Noncoding-Transcript-Variant
Garin5a 1770 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243519043
MGI SNP Detail
Alliance Variant		 Chr7:44144344 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1661 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212119900
MGI SNP Detail
Alliance Variant		 Chr7:44144349 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1656 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs38023109
MGI SNP Detail
Alliance Variant		 Chr7:44144378 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1627 bp upstream
 SNP A/G A A A A A G G A G A G A
rs37739795
MGI SNP Detail
Alliance Variant		 Chr7:44144389 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1616 bp upstream
 SNP G/T G T G T G T G T G T T G G
rs579850256
MGI SNP Detail
Alliance Variant		 Chr7:44144475 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1530 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs50386142
MGI SNP Detail
Alliance Variant		 Chr7:44144555 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1450 bp upstream
 SNP C/T T C C T C
rs51904572
MGI SNP Detail
Alliance Variant		 Chr7:44144563 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1442 bp upstream
 SNP A/G G A A G A
rs261084563
MGI SNP Detail
Alliance Variant		 Chr7:44144569 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1436 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A A A G A A G G G G G A G G G G A G A G G G G G A G G G G G G
rs226563513
MGI SNP Detail
Alliance Variant		 Chr7:44144594 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1411 bp upstream
 SNP A/T A A A T A T T T A A A A T T T T T T T T A T T T T A T T T T A T A T A A T T T A T T A A T T T T T T A T A
rs242581754
MGI SNP Detail
Alliance Variant		 Chr7:44144596 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1409 bp upstream
 SNP C/T C C C T C T T T C C C C T T T T T T T T C T T T T C T T T T C T C T C C T T T C T T C C T T T T C T C T
rs248531182
MGI SNP Detail
Alliance Variant		 Chr7:44144598 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1407 bp upstream
 SNP C/T T T T C T C C C T T T T C C C C C C C C T C C C C T C C C C T C T C T T C C C T C T T C C C C C C T C T
rs49773700
MGI SNP Detail
Alliance Variant		 Chr7:44144646 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1359 bp upstream
 SNP A/G A G G A G
rs36481066
MGI SNP Detail
Alliance Variant		 Chr7:44144667 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1338 bp upstream
 SNP C/G G G C G C G G G G C G G G G G C C
rs37260201
MGI SNP Detail
Alliance Variant		 Chr7:44144781 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1224 bp upstream
 SNP A/G A G A G A G A A G A G G G G
rs231426846
MGI SNP Detail
Alliance Variant		 Chr7:44144783 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1222 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs250988384
MGI SNP Detail
Alliance Variant		 Chr7:44144784 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1221 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263940368
MGI SNP Detail
Alliance Variant		 Chr7:44144819 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1186 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32385486
MGI SNP Detail
Alliance Variant		 Chr7:44144820 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1185 bp upstream
 SNP C/G G G C G C G C G C G G G G G C C
rs50075171
MGI SNP Detail
Alliance Variant		 Chr7:44144917 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1088 bp upstream
 SNP C/T C T C T
rs224242188
MGI SNP Detail
Alliance Variant		 Chr7:44144963 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1042 bp upstream
 SNP A/G G A
rs240107136
MGI SNP Detail
Alliance Variant		 Chr7:44144976 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 1029 bp upstream
 SNP A/G A G
rs255590611
MGI SNP Detail
Alliance Variant		 Chr7:44145048 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 957 bp upstream
 SNP A/G G A
rs217294762
MGI SNP Detail
Alliance Variant		 Chr7:44145277 Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 728 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238041390
MGI SNP Detail
Alliance Variant		 Chr7:44145437 Cpgi18969 within coordinates of
Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 568 bp upstream
Rr380742 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31988616
MGI SNP Detail
Alliance Variant		 Chr7:44145574 Cpgi18969 within coordinates of
Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 431 bp upstream
Rr380742 within coordinates of
 SNP A/C A A C A C A C C C C C A C C C
rs218350582
MGI SNP Detail
Alliance Variant		 Chr7:44145583 Cpgi18969 within coordinates of
Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 422 bp upstream
Rr380742 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230969708
MGI SNP Detail
Alliance Variant		 Chr7:44145613 Cpgi18969 within coordinates of
Emc10 Intron
Emc10 Noncoding-Transcript-Variant
Garin5a 392 bp upstream
Rr380742 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs3710949
MGI SNP Detail
Alliance Variant		 Chr7:44145760 Cpgi18969 within coordinates of
Emc10 Coding-Synonymous
Emc10 Noncoding-Transcript-Variant
Garin5a 245 bp upstream
Rr380742 within coordinates of
 SNP A/G A A G A G A A G G G A G G
rs31988102
MGI SNP Detail
Alliance Variant		 Chr7:44145965 Cpgi18969 within coordinates of
Garin5a mRNA-UTR
Rr380742 within coordinates of
Rr646108 within coordinates of
 SNP C/T T T C T C T C C C T C C C C C
rs32438389
MGI SNP Detail
Alliance Variant		 Chr7:44145987 Cpgi18969 within coordinates of
Garin5a mRNA-UTR
Rr380742 within coordinates of
Rr646108 within coordinates of
 SNP A/G G G A G G A
rs251638432
MGI SNP Detail
Alliance Variant		 Chr7:44146143 Cpgi18969 within coordinates of
Garin5a Coding-NonSynonymous
Garin5a mRNA-UTR
Rr380742 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223791174
MGI SNP Detail
Alliance Variant		 Chr7:44146478 Cpgi18969 within coordinates of
Garin5a Coding-Synonymous
Garin5a Intron
Garin5a mRNA-UTR
Rr380742 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs36600705
MGI SNP Detail
Alliance Variant		 Chr7:44146496 Cpgi18969 within coordinates of
Garin5a Intron
Garin5a mRNA-UTR
Garin5a Splice-Site
Rr380742 within coordinates of
 SNP G/T T T G T G G G G T T
rs234417529
MGI SNP Detail
Alliance Variant		 Chr7:44146549 Cpgi18969 within coordinates of
Garin5a Intron
Garin5a mRNA-UTR
Rr380742 within coordinates of
 SNP A/G A G
rs37490126
MGI SNP Detail
Alliance Variant		 Chr7:44146611 Garin5a Intron
Rr380742 within coordinates of
 SNP C/T T C C T C C T C T C C C C
rs38489496
MGI SNP Detail
Alliance Variant		 Chr7:44146624 Garin5a Intron
Rr380742 within coordinates of
 SNP A/C C C C C C A C A C A C
rs258261083
MGI SNP Detail
Alliance Variant		 Chr7:44146646 Garin5a Intron
Rr380742 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs225717907
MGI SNP Detail
Alliance Variant		 Chr7:44146667 4921540A03Rik within coordinates of
Garin5a Intron
Rr380742 within coordinates of
Tssr66391 within coordinates of
 SNP C/T T C C C C T T T C C C C C C C T C T T T C C T C T T C C T T T C C T C C C
rs585638891
MGI SNP Detail
Alliance Variant		 Chr7:44146685 4921540A03Rik within coordinates of
Garin5a Intron
Rr380742 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31651410
MGI SNP Detail
Alliance Variant		 Chr7:44146736 4921540A03Rik within coordinates of
Garin5a Intron
Rr380742 within coordinates of
 SNP C/T C T
rs31133028
MGI SNP Detail
Alliance Variant		 Chr7:44146744 4921540A03Rik within coordinates of
Garin5a Intron
Rr380742 within coordinates of
 SNP C/T C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232226368
MGI SNP Detail
Alliance Variant		 Chr7:44146801 4921540A03Rik within coordinates of
Garin5a Intron
Rr380742 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50902668
MGI SNP Detail
Alliance Variant		 Chr7:44146802 4921540A03Rik within coordinates of
Garin5a Intron
Rr380742 within coordinates of
 SNP C/T T C C T
rs218312456
MGI SNP Detail
Alliance Variant		 Chr7:44146885 4921540A03Rik within coordinates of
Garin5a Intron
Rr380742 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36243883
MGI SNP Detail
Alliance Variant		 Chr7:44146922 4921540A03Rik within coordinates of
Garin5a Intron
Garin5a Splice-Site
Rr380742 within coordinates of
 SNP C/T C C C C C C C T T C C T C T T C
rs38307110
MGI SNP Detail
Alliance Variant		 Chr7:44147136 4921540A03Rik within coordinates of
Garin5a Intron
Rr380742 within coordinates of
 SNP A/G A A A A A A A G A A G A G A
rs214706554
MGI SNP Detail
Alliance Variant		 Chr7:44147349 Garin5a Intron
Rr380742 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580035393
MGI SNP Detail
Alliance Variant		 Chr7:44147382 Garin5a Intron
Rr380742 within coordinates of
 SNP A/G G G G A G A A A G G G G A A A A A A A A G A A A A G A A A A G A G A G G A A A G A A G G A A A A A A G A A
rs231721217
MGI SNP Detail
Alliance Variant		 Chr7:44147413 Garin5a Intron
Rr380742 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263577897
MGI SNP Detail
Alliance Variant		 Chr7:44147417 Garin5a Intron
Rr380742 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227777433
MGI SNP Detail
Alliance Variant		 Chr7:44147443 Garin5a Intron
Rr380742 within coordinates of
 SNP A/C A C
rs242679156
MGI SNP Detail
Alliance Variant		 Chr7:44147463 Garin5a Intron
Rr380742 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36384153
MGI SNP Detail
Alliance Variant		 Chr7:44147471 Garin5a Intron
Rr380742 within coordinates of
 SNP G/T G G G G G T G T G T G
rs218659747
MGI SNP Detail
Alliance Variant		 Chr7:44147482 Garin5a Intron
Rr380742 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236997247
MGI SNP Detail
Alliance Variant		 Chr7:44147599 Garin5a Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs583817188
MGI SNP Detail
Alliance Variant		 Chr7:44147624 Garin5a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586194519
MGI SNP Detail
Alliance Variant		 Chr7:44147627 Garin5a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258202578
MGI SNP Detail
Alliance Variant		 Chr7:44147704 Garin5a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579558727
MGI SNP Detail
Alliance Variant		 Chr7:44147711 Garin5a Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs244743353
MGI SNP Detail
Alliance Variant		 Chr7:44147815 Garin5a Intron
 SNP C/T T C
rs214172178
MGI SNP Detail
Alliance Variant		 Chr7:44147859 Garin5a Intron
 SNP A/G A G
rs265499305
MGI SNP Detail
Alliance Variant		 Chr7:44147931 Garin5a Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C C C T C C T T T T T T T T T T C T C T T T T T C T T T T T T
rs233883324
MGI SNP Detail
Alliance Variant		 Chr7:44147953 Garin5a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A A A G A A G G G G G A G G G G A G A G G G G G A G A G G G G
rs229768454
MGI SNP Detail
Alliance Variant		 Chr7:44147974 Garin5a Intron
 SNP A/G G A
rs264072011
MGI SNP Detail
Alliance Variant		 Chr7:44148020 Garin5a Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G G G A G G A A A A A A A A A A G A G A A A A A G A A A A A A
rs242493444
MGI SNP Detail
Alliance Variant		 Chr7:44148048 Garin5a Intron
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A G A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37393756
MGI SNP Detail
Alliance Variant		 Chr7:44148066 Garin5a Intron
 SNP C/T T C T C C C T
rs231667247
MGI SNP Detail
Alliance Variant		 Chr7:44148107 Garin5a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253489884
MGI SNP Detail
Alliance Variant		 Chr7:44148118 Garin5a Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs216631537
MGI SNP Detail
Alliance Variant		 Chr7:44148124 Garin5a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587072833
MGI SNP Detail
Alliance Variant		 Chr7:44148145 Garin5a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581062685
MGI SNP Detail
Alliance Variant		 Chr7:44148225 Garin5a Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583845409
MGI SNP Detail
Alliance Variant		 Chr7:44148227 Garin5a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31733053
MGI SNP Detail
Alliance Variant		 Chr7:44148253 Garin5a Intron
 SNP A/G A A G
rs253850956
MGI SNP Detail
Alliance Variant		 Chr7:44148257 Garin5a Intron
 SNP A/G A G
rs31926127
MGI SNP Detail
Alliance Variant		 Chr7:44148261 Garin5a Intron
 SNP A/G A A G
rs36983647
MGI SNP Detail
Alliance Variant		 Chr7:44148326 Garin5a Intron
 SNP A/G G G G A G A G A A A A G G
rs212580464
MGI SNP Detail
Alliance Variant		 Chr7:44148352 Garin5a Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229726488
MGI SNP Detail
Alliance Variant		 Chr7:44148371 Garin5a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32224658
MGI SNP Detail
Alliance Variant		 Chr7:44148431 Garin5a Intron
 SNP A/G G A G A G G A G G G A G G G G G A A
rs219420722
MGI SNP Detail
Alliance Variant		 Chr7:44148465 Garin5a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248778313
MGI SNP Detail
Alliance Variant		 Chr7:44148514 Garin5a Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258570640
MGI SNP Detail
Alliance Variant		 Chr7:44148530 Garin5a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs49435537
MGI SNP Detail
Alliance Variant		 Chr7:44148534 Garin5a Intron
 SNP A/T T T A T
rs51650387
MGI SNP Detail
Alliance Variant		 Chr7:44148547 Garin5a Intron
 SNP A/G A A G A
rs49006932
MGI SNP Detail
Alliance Variant		 Chr7:44148630 Garin5a Intron
 SNP C/T T T C T
rs50866128
MGI SNP Detail
Alliance Variant		 Chr7:44148705 Garin5a Intron
 SNP C/G C C G C
rs36379130
MGI SNP Detail
Alliance Variant		 Chr7:44148737 Garin5a Intron
 SNP A/G G A G A G G G A G G A G A A A
rs256527493
MGI SNP Detail
Alliance Variant		 Chr7:44148744 Garin5a Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45686692
MGI SNP Detail
Alliance Variant		 Chr7:44148784 Garin5a Intron
 SNP C/T C C T C
rs258605922
MGI SNP Detail
Alliance Variant		 Chr7:44148825 Garin5a Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 186
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory