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Mouse SNP Summary
Symbol
Name
ID 		5033430I15Rik
RIKEN cDNA 5033430I15 gene
MGI:1923250

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Showing SNP(s) 1 - 59 of 59

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260468329
MGI SNP Detail		 Chr13:46116704 5033430I15Rik 1996 bp upstream
Atxn1 within coordinates of
 SNP A A A A A A A
rs216804852
MGI SNP Detail		 Chr13:46116907 5033430I15Rik 1793 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs230890008
MGI SNP Detail		 Chr13:46116943 5033430I15Rik 1757 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs248218484
MGI SNP Detail		 Chr13:46116967 5033430I15Rik 1733 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220118742
MGI SNP Detail		 Chr13:46116988 5033430I15Rik 1712 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP C/T T C C C C C C T C C C C C C C C C T C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs238032182
MGI SNP Detail		 Chr13:46117156 5033430I15Rik 1544 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259483718
MGI SNP Detail		 Chr13:46117190 5033430I15Rik 1510 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
Tssr122339 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs224174382
MGI SNP Detail		 Chr13:46117280 5033430I15Rik 1420 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs248168970
MGI SNP Detail		 Chr13:46117310 5033430I15Rik 1390 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs260552613
MGI SNP Detail		 Chr13:46117538 5033430I15Rik 1162 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218650796
MGI SNP Detail		 Chr13:46117605 5033430I15Rik 1095 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236999540
MGI SNP Detail		 Chr13:46117725 5033430I15Rik 975 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs258026338
MGI SNP Detail		 Chr13:46117830 5033430I15Rik 870 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229507079
MGI SNP Detail		 Chr13:46117834 5033430I15Rik 866 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP A/G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257864550
MGI SNP Detail		 Chr13:46117862 5033430I15Rik 838 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP C/G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs52576208
MGI SNP Detail		 Chr13:46117936 5033430I15Rik 764 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP A A
rs52435435
MGI SNP Detail		 Chr13:46118045 5033430I15Rik 655 bp upstream
Atxn1 within coordinates of
Cpgi5536 within coordinates of
 SNP G G
rs30095666
MGI SNP Detail		 Chr13:46118656 5033430I15Rik 44 bp upstream
Cpgi5536 within coordinates of
Rr403752 within coordinates of
 SNP A/T T A T
rs232609790
MGI SNP Detail		 Chr13:46118762 5033430I15Rik within coordinates of
Cpgi5536 within coordinates of
Gm56575 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs247677933
MGI SNP Detail		 Chr13:46118828 5033430I15Rik within coordinates of
Cpgi5536 within coordinates of
Gm56575 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29251008
MGI SNP Detail		 Chr13:46118927 5033430I15Rik within coordinates of
Cpgi5536 within coordinates of
Gm56575 within coordinates of
 SNP A/C A C A A A
rs224556103
MGI SNP Detail		 Chr13:46118947 5033430I15Rik within coordinates of
Cpgi5536 within coordinates of
Gm56575 within coordinates of
Tssr119585 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs242521819
MGI SNP Detail		 Chr13:46119174 5033430I15Rik within coordinates of
Cpgi5536 within coordinates of
Gm56575 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215228138
MGI SNP Detail		 Chr13:46119357 5033430I15Rik within coordinates of
Cpgi5536 within coordinates of
Gm56575 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236244345
MGI SNP Detail		 Chr13:46119528 5033430I15Rik within coordinates of
Cpgi5536 within coordinates of
Gm56575 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263399061
MGI SNP Detail		 Chr13:46119529 5033430I15Rik within coordinates of
Cpgi5536 within coordinates of
Gm56575 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215668239
MGI SNP Detail		 Chr13:46119538 5033430I15Rik within coordinates of
Cpgi5536 within coordinates of
Gm56575 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243036341
MGI SNP Detail		 Chr13:46119582 5033430I15Rik within coordinates of
Cpgi5536 within coordinates of
Gm56575 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254227693
MGI SNP Detail		 Chr13:46119749 5033430I15Rik within coordinates of
Cpgi5536 within coordinates of
Gm56575 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218800360
MGI SNP Detail		 Chr13:46119843 5033430I15Rik within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs236960571
MGI SNP Detail		 Chr13:46119907 5033430I15Rik within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251743778
MGI SNP Detail		 Chr13:46119908 5033430I15Rik within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585200610
MGI SNP Detail		 Chr13:46119981 5033430I15Rik within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245922642
MGI SNP Detail		 Chr13:46120068 5033430I15Rik 84 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265421524
MGI SNP Detail		 Chr13:46120081 5033430I15Rik 97 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231978369
MGI SNP Detail		 Chr13:46120185 5033430I15Rik 201 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C C C C C C C C C T C C C C
rs241936329
MGI SNP Detail		 Chr13:46120259 5033430I15Rik 275 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259327857
MGI SNP Detail		 Chr13:46120346 5033430I15Rik 362 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs224749244
MGI SNP Detail		 Chr13:46120445 5033430I15Rik 461 bp downstream
 SNP A/C A A C C C C C C A C C C C C C C C C A C C A C C C C A C C C C A C C C C C A C C C C C A C C A C C A C
rs242584516
MGI SNP Detail		 Chr13:46120446 5033430I15Rik 462 bp downstream
 SNP C/T T C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214897209
MGI SNP Detail		 Chr13:46120458 5033430I15Rik 474 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230445961
MGI SNP Detail		 Chr13:46120576 5033430I15Rik 592 bp downstream
 SNP A/G G G A A A A A A G A A A A A A A A A G A A G A A A A G A A A A G A A A A A G A A A A A A A G A A A A
rs253204223
MGI SNP Detail		 Chr13:46120611 5033430I15Rik 627 bp downstream
 SNP C/T C C T T T T T T C T T T T T T T T T C T T C T T T T C T T T T C T T T T T C T T T T T T T C T T T T
rs29231857
MGI SNP Detail		 Chr13:46120826 5033430I15Rik 842 bp downstream
 SNP C/T C T T
rs236358570
MGI SNP Detail		 Chr13:46120943 5033430I15Rik 959 bp downstream
 SNP C/T C C T T T T T T C T T T T T T T T C T T T T T T T T T T T T T T T T C T T T T T T T C T T T
rs254428537
MGI SNP Detail		 Chr13:46121186 5033430I15Rik 1202 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212858013
MGI SNP Detail		 Chr13:46121215 5033430I15Rik 1231 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229780125
MGI SNP Detail		 Chr13:46121238 5033430I15Rik 1254 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs262395687
MGI SNP Detail		 Chr13:46121384 5033430I15Rik 1400 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs108345183
MGI SNP Detail		 Chr13:46121476 5033430I15Rik 1492 bp downstream
 SNP A/T T A T A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260114841
MGI SNP Detail		 Chr13:46121478 5033430I15Rik 1494 bp downstream
 SNP A/T T A
rs222308617
MGI SNP Detail		 Chr13:46121612 5033430I15Rik 1628 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248714381
MGI SNP Detail		 Chr13:46121807 5033430I15Rik 1823 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258303735
MGI SNP Detail		 Chr13:46121837 5033430I15Rik 1853 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs226825327
MGI SNP Detail		 Chr13:46121876 5033430I15Rik 1892 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241898381
MGI SNP Detail		 Chr13:46121883 5033430I15Rik 1899 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs259387280
MGI SNP Detail		 Chr13:46121884 5033430I15Rik 1900 bp downstream
 SNP G/T G G G T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T
rs219007424
MGI SNP Detail		 Chr13:46121917 5033430I15Rik 1933 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236121373
MGI SNP Detail		 Chr13:46121918 5033430I15Rik 1934 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 59 of 59
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/10/2024
MGI 6.24 		The Jackson Laboratory