Mouse SNP Summary

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs249473039 MGI SNP Detail Alliance Variant	Chr5:115572134	4930430O22Rik 1991 bp downstream Msi1 Intron	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	G	G
rs263251800 MGI SNP Detail Alliance Variant	Chr5:115572151	4930430O22Rik 1974 bp downstream Msi1 Intron	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
rs223362476 MGI SNP Detail Alliance Variant	Chr5:115572246	4930430O22Rik 1879 bp downstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs51736966 MGI SNP Detail Alliance Variant	Chr5:115572271	4930430O22Rik 1854 bp downstream Msi1 Intron	SNP	A/G					G																					A						A																	G
rs256874110 MGI SNP Detail Alliance Variant	Chr5:115572285	4930430O22Rik 1840 bp downstream Msi1 Intron	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	C	G	G	G	G	C	G	G	G	G	G	C	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G	G	G	G	G
rs224183161 MGI SNP Detail Alliance Variant	Chr5:115572292	4930430O22Rik 1833 bp downstream Msi1 Intron	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
rs248824715 MGI SNP Detail Alliance Variant	Chr5:115572299	4930430O22Rik 1826 bp downstream Msi1 Intron	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
rs29733510 MGI SNP Detail Alliance Variant	Chr5:115572305	4930430O22Rik 1820 bp downstream Msi1 Intron	SNP	A/G				G	G											A										G						G																	A
rs232234970 MGI SNP Detail Alliance Variant	Chr5:115572311	4930430O22Rik 1814 bp downstream Msi1 Intron	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	A	A
rs257117089 MGI SNP Detail Alliance Variant	Chr5:115572343	4930430O22Rik 1782 bp downstream Msi1 Intron	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A
rs33733390 MGI SNP Detail Alliance Variant	Chr5:115572355	4930430O22Rik 1770 bp downstream Msi1 Intron	SNP	C/T				T	C											C										T						T																	C
rs231245456 MGI SNP Detail Alliance Variant	Chr5:115572376	4930430O22Rik 1749 bp downstream Msi1 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs242761997 MGI SNP Detail Alliance Variant	Chr5:115572388	4930430O22Rik 1737 bp downstream Msi1 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs29733222 MGI SNP Detail Alliance Variant	Chr5:115572406	4930430O22Rik 1719 bp downstream Msi1 Intron	SNP	C/T				T	T											C										T						T																	C
rs234863843 MGI SNP Detail Alliance Variant	Chr5:115572441	4930430O22Rik 1684 bp downstream Msi1 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs253481138 MGI SNP Detail Alliance Variant	Chr5:115572442	4930430O22Rik 1683 bp downstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs33608153 MGI SNP Detail Alliance Variant	Chr5:115572457	4930430O22Rik 1668 bp downstream Msi1 Intron	SNP	G/T				G	T											G										G
rs386949566 MGI SNP Detail Alliance Variant	Chr5:115572466	4930430O22Rik 1659 bp downstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G
rs238905310 MGI SNP Detail Alliance Variant	Chr5:115572469	4930430O22Rik 1656 bp downstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs263070860 MGI SNP Detail Alliance Variant	Chr5:115572515	4930430O22Rik 1610 bp downstream Msi1 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs223608956 MGI SNP Detail Alliance Variant	Chr5:115572544	4930430O22Rik 1581 bp downstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs387348983 MGI SNP Detail Alliance Variant	Chr5:115572613	4930430O22Rik 1512 bp downstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
rs239125358 MGI SNP Detail Alliance Variant	Chr5:115572632	4930430O22Rik 1493 bp downstream Msi1 Intron	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G
rs256840710 MGI SNP Detail Alliance Variant	Chr5:115572680	4930430O22Rik 1445 bp downstream Msi1 Intron	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
rs218184419 MGI SNP Detail Alliance Variant	Chr5:115572693	4930430O22Rik 1432 bp downstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs242859063 MGI SNP Detail Alliance Variant	Chr5:115572698	4930430O22Rik 1427 bp downstream Msi1 Intron	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
rs263989895 MGI SNP Detail Alliance Variant	Chr5:115572716	4930430O22Rik 1409 bp downstream Msi1 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
rs585748428 MGI SNP Detail Alliance Variant	Chr5:115572797	4930430O22Rik 1328 bp downstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs386960508 MGI SNP Detail Alliance Variant	Chr5:115572805	4930430O22Rik 1320 bp downstream Msi1 Intron	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C
rs265265441 MGI SNP Detail Alliance Variant	Chr5:115572914	4930430O22Rik 1211 bp downstream Msi1 Intron	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
rs225028637 MGI SNP Detail Alliance Variant	Chr5:115572964	4930430O22Rik 1161 bp downstream Msi1 Intron	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G
rs29685447 MGI SNP Detail Alliance Variant	Chr5:115572971	4930430O22Rik 1154 bp downstream Msi1 Intron	SNP	A/G				G	A											G
rs211846635 MGI SNP Detail Alliance Variant	Chr5:115573072	4930430O22Rik 1053 bp downstream Msi1 Intron Msi1 mRNA-UTR Tssr48243 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs234818643 MGI SNP Detail Alliance Variant	Chr5:115573074	4930430O22Rik 1051 bp downstream Msi1 Intron Msi1 mRNA-UTR Tssr48243 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G
rs258855061 MGI SNP Detail Alliance Variant	Chr5:115573083	4930430O22Rik 1042 bp downstream Msi1 Intron Msi1 mRNA-UTR Tssr48243 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
rs33219264 MGI SNP Detail Alliance Variant	Chr5:115573161	4930430O22Rik 964 bp downstream Msi1 Intron Msi1 mRNA-UTR Tssr48246 within coordinates of	SNP	A/G				A	G
rs581920681 MGI SNP Detail Alliance Variant	Chr5:115573184	4930430O22Rik 941 bp downstream Msi1 Intron Msi1 mRNA-UTR	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C
rs241603381 MGI SNP Detail Alliance Variant	Chr5:115573212	4930430O22Rik 913 bp downstream Msi1 Intron	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G
rs586018812 MGI SNP Detail Alliance Variant	Chr5:115573258	4930430O22Rik 867 bp downstream Msi1 Intron	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
rs258909963 MGI SNP Detail Alliance Variant	Chr5:115573321	4930430O22Rik 804 bp downstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs387780127 MGI SNP Detail Alliance Variant	Chr5:115573388	4930430O22Rik 737 bp downstream Msi1 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C
rs33602612 MGI SNP Detail Alliance Variant	Chr5:115573584	4930430O22Rik 541 bp downstream Msi1 Coding-Synonymous	SNP	C/T				C	T											C										C
rs232132922 MGI SNP Detail Alliance Variant	Chr5:115573590	4930430O22Rik 535 bp downstream Msi1 Coding-Synonymous	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs250571053 MGI SNP Detail Alliance Variant	Chr5:115573593	4930430O22Rik 532 bp downstream Msi1 Coding-Synonymous	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs218327148 MGI SNP Detail Alliance Variant	Chr5:115573672	4930430O22Rik 453 bp downstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs242819914 MGI SNP Detail Alliance Variant	Chr5:115573692	4930430O22Rik 433 bp downstream Msi1 Intron	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	T
rs263807143 MGI SNP Detail Alliance Variant	Chr5:115573820	4930430O22Rik 305 bp downstream Msi1 Intron	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
rs224949188 MGI SNP Detail Alliance Variant	Chr5:115573838	4930430O22Rik 287 bp downstream Msi1 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs247827600 MGI SNP Detail Alliance Variant	Chr5:115574022	4930430O22Rik 103 bp downstream Msi1 Intron	SNP	A/C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	A	C	C	C	C	A	C	C	C	C	C	A	C	C	C	C	C	C	A	C	C	C	C	C	C	C	G	C	C	C	C
rs262770762 MGI SNP Detail Alliance Variant	Chr5:115574048	4930430O22Rik 77 bp downstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs225103274 MGI SNP Detail Alliance Variant	Chr5:115574098	4930430O22Rik 27 bp downstream Msi1 Intron	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T	T	T	T	C	T	T	T	T	T	C	T	T	T	T	T	T	C	T	T	T	T	T	T	T	C	T	T	C	C
rs236594669 MGI SNP Detail Alliance Variant	Chr5:115574182	4930430O22Rik within coordinates of Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs253669323 MGI SNP Detail Alliance Variant	Chr5:115574232	4930430O22Rik within coordinates of Msi1 Intron	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A	A	A	A	T	A	A	A	A	A	T	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A	A	A	T	T
rs229059655 MGI SNP Detail Alliance Variant	Chr5:115574253	4930430O22Rik within coordinates of Msi1 Intron	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A	A	A	A	T	A	A	A	A	A	T	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A	A	A	A	A
rs253602296 MGI SNP Detail Alliance Variant	Chr5:115574317	4930430O22Rik within coordinates of Msi1 Intron	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T
rs46098729 MGI SNP Detail Alliance Variant	Chr5:115574336	4930430O22Rik within coordinates of Msi1 Intron	SNP	G/T	T	T	T		G	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T	T	T	T	G	T	T	T	T	T	G	T	T	T	T	G	T	G	T	T	T	T	T	T	T	G	G	T	G
rs232713705 MGI SNP Detail Alliance Variant	Chr5:115574531	4930430O22Rik within coordinates of Cpgi16371 within coordinates of Msi1 Intron	SNP	C/T	T	T	T		C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T	T	C	T	C	T	T	T	T	T	C	T	T	T	T	C	T	C	T	T	T	T	T	T	T	C	C	C	C
rs257673572 MGI SNP Detail Alliance Variant	Chr5:115574837	4930430O22Rik 134 bp upstream Cpgi16371 within coordinates of Msi1 Intron Msi1 mRNA-UTR Rr618245 within coordinates of	SNP	A/G		G			A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	A	G	A	G		G	G	G	A	G	G	G	G	A	G	A	G	G	G	G	G	G	G	A	A	A	G	G
rs214765517 MGI SNP Detail Alliance Variant	Chr5:115574840	4930430O22Rik 137 bp upstream Cpgi16371 within coordinates of Msi1 Intron Msi1 mRNA-UTR Rr618245 within coordinates of	SNP	A/C		C			C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	A	C	C	C	C		C		C	C	C		C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C
rs232075467 MGI SNP Detail Alliance Variant	Chr5:115574987	4930430O22Rik 284 bp upstream Cpgi16371 within coordinates of Msi1 Intron Msi1 mRNA-UTR Rr618245 within coordinates of	SNP	C/T		C			C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs250763662 MGI SNP Detail Alliance Variant	Chr5:115575115	4930430O22Rik 412 bp upstream Cpgi16371 within coordinates of Msi1 Intron Msi1 mRNA-UTR Rr618245 within coordinates of	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	A	T
rs586179829 MGI SNP Detail Alliance Variant	Chr5:115575132	4930430O22Rik 429 bp upstream Cpgi16371 within coordinates of Msi1 Intron Msi1 mRNA-UTR Rr618245 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G
rs212218416 MGI SNP Detail Alliance Variant	Chr5:115575188	4930430O22Rik 485 bp upstream Cpgi16371 within coordinates of Msi1 Intron Msi1 mRNA-UTR Rr618245 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs29584176 MGI SNP Detail Alliance Variant	Chr5:115575382	4930430O22Rik 679 bp upstream Msi1 Intron	SNP	A/G				A	G											A										A
rs260323613 MGI SNP Detail Alliance Variant	Chr5:115575478	4930430O22Rik 775 bp upstream Msi1 Intron	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
rs225254161 MGI SNP Detail Alliance Variant	Chr5:115575520	4930430O22Rik 817 bp upstream Msi1 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C
rs245357114 MGI SNP Detail Alliance Variant	Chr5:115575564	4930430O22Rik 861 bp upstream Msi1 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs262424410 MGI SNP Detail Alliance Variant	Chr5:115575569	4930430O22Rik 866 bp upstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs33445965 MGI SNP Detail Alliance Variant	Chr5:115575577	4930430O22Rik 874 bp upstream Msi1 Intron	SNP	C/T					C											T
rs236548256 MGI SNP Detail Alliance Variant	Chr5:115575623	4930430O22Rik 920 bp upstream Msi1 Intron	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
rs387184852 MGI SNP Detail Alliance Variant	Chr5:115575674	4930430O22Rik 971 bp upstream Msi1 Intron	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C
rs253813096 MGI SNP Detail Alliance Variant	Chr5:115575690	4930430O22Rik 987 bp upstream Msi1 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C
rs229023311 MGI SNP Detail Alliance Variant	Chr5:115575715	4930430O22Rik 1012 bp upstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G
rs249907251 MGI SNP Detail Alliance Variant	Chr5:115575735	4930430O22Rik 1032 bp upstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	A	A
rs33174495 MGI SNP Detail Alliance Variant	Chr5:115575762	4930430O22Rik 1059 bp upstream Msi1 Intron	SNP	A/G					G											A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs51412236 MGI SNP Detail Alliance Variant	Chr5:115575763	4930430O22Rik 1060 bp upstream Msi1 Intron	SNP	G					G
rs33482870 MGI SNP Detail Alliance Variant	Chr5:115575791	4930430O22Rik 1088 bp upstream Msi1 Intron	SNP	A/G					G											A
rs47270623 MGI SNP Detail Alliance Variant	Chr5:115575888	4930430O22Rik 1185 bp upstream Msi1 Intron	SNP	T					T
rs226175278 MGI SNP Detail Alliance Variant	Chr5:115575965	4930430O22Rik 1262 bp upstream Msi1 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs49563730 MGI SNP Detail Alliance Variant	Chr5:115575997	4930430O22Rik 1294 bp upstream Msi1 Intron	SNP	C					C
rs212385802 MGI SNP Detail Alliance Variant	Chr5:115576095	4930430O22Rik 1392 bp upstream Msi1 Intron	SNP	A/G		G			G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G		G	G	G	A	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G
rs240611778 MGI SNP Detail Alliance Variant	Chr5:115576099	4930430O22Rik 1396 bp upstream Msi1 Intron	SNP	A/G		A			G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	G	G	G	G
rs259318602 MGI SNP Detail Alliance Variant	Chr5:115576135	4930430O22Rik 1432 bp upstream Msi1 Intron	SNP	C/T		T			C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	C	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	C	C	C	C
rs216969009 MGI SNP Detail Alliance Variant	Chr5:115576137	4930430O22Rik 1434 bp upstream Msi1 Intron	SNP	C/T		T			C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	C	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	C	C	C
rs240023801 MGI SNP Detail Alliance Variant	Chr5:115576138	4930430O22Rik 1435 bp upstream Msi1 Intron	SNP	A/G		G			A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	A	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	A	A	A
rs46663661 MGI SNP Detail Alliance Variant	Chr5:115576206	4930430O22Rik 1503 bp upstream Msi1 Intron Rr618247 within coordinates of	SNP	T					T
rs219335417 MGI SNP Detail Alliance Variant	Chr5:115576305	4930430O22Rik 1602 bp upstream Msi1 Intron Msi1 mRNA-UTR Rr618247 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs230740626 MGI SNP Detail Alliance Variant	Chr5:115576348	4930430O22Rik 1645 bp upstream Msi1 Intron Msi1 mRNA-UTR Rr618247 within coordinates of	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
rs248059591 MGI SNP Detail Alliance Variant	Chr5:115576358	4930430O22Rik 1655 bp upstream Msi1 Intron Msi1 mRNA-UTR Rr618247 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs29821143 MGI SNP Detail Alliance Variant	Chr5:115576397	4930430O22Rik 1694 bp upstream Msi1 Intron Msi1 mRNA-UTR Rr618247 within coordinates of	SNP	C/T					C											T										C						C																	T
rs247298410 MGI SNP Detail Alliance Variant	Chr5:115576424	4930430O22Rik 1721 bp upstream Msi1 Intron Msi1 mRNA-UTR Rr618247 within coordinates of	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	G	A	A	A	A	A	G	A	A	A	A	A	A	G	A	A	A	A	A	A	A	G	A	A	A	A
rs387391637 MGI SNP Detail Alliance Variant	Chr5:115576436	4930430O22Rik 1733 bp upstream Msi1 Intron Msi1 mRNA-UTR Rr618247 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C
rs265647966 MGI SNP Detail Alliance Variant	Chr5:115576518	4930430O22Rik 1815 bp upstream Msi1 Intron Rr618247 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G
rs33687549 MGI SNP Detail Alliance Variant	Chr5:115576535	4930430O22Rik 1832 bp upstream Msi1 Intron Rr618247 within coordinates of	SNP	C/T					T											C										T						T																	C
rs246484230 MGI SNP Detail Alliance Variant	Chr5:115576547	4930430O22Rik 1844 bp upstream Msi1 Intron Rr618247 within coordinates of	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
rs257275184 MGI SNP Detail Alliance Variant	Chr5:115576642	4930430O22Rik 1939 bp upstream Msi1 Intron Rr618247 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C	C	T	C	C	C	C	C	C	C	T	C	C	C	C
rs33170565 MGI SNP Detail Alliance Variant	Chr5:115576643	4930430O22Rik 1940 bp upstream Msi1 Intron Rr618247 within coordinates of	SNP	A/G					A											G										A						A																	G
rs579622397 MGI SNP Detail Alliance Variant	Chr5:115576648	4930430O22Rik 1945 bp upstream Msi1 Intron Rr618247 within coordinates of	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G