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Mouse SNP Summary
Symbol
Name
ID
1700064N11Rik
RIKEN cDNA 1700064N11 gene
MGI:1925708

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237271287
MGI SNP Detail
Chr5:121846303 1700064N11Rik 1994 bp downstream
Gm71700 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255985350
MGI SNP Detail
Chr5:121846304 1700064N11Rik 1993 bp downstream
Gm71700 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs227711196
MGI SNP Detail
Chr5:121846389 1700064N11Rik 1908 bp downstream
Gm71700 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs242197426
MGI SNP Detail
Chr5:121846442 1700064N11Rik 1855 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265908814
MGI SNP Detail
Chr5:121846461 1700064N11Rik 1836 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs233762767
MGI SNP Detail
Chr5:121846482 1700064N11Rik 1815 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs246299288
MGI SNP Detail
Chr5:121846497 1700064N11Rik 1800 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs215360295
MGI SNP Detail
Chr5:121846541 1700064N11Rik 1756 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs228219503
MGI SNP Detail
Chr5:121846604 1700064N11Rik 1693 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs579650006
MGI SNP Detail
Chr5:121846635 1700064N11Rik 1662 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs245161009
MGI SNP Detail
Chr5:121846647 1700064N11Rik 1650 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214875895
MGI SNP Detail
Chr5:121846669 1700064N11Rik 1628 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs236329072
MGI SNP Detail
Chr5:121846680 1700064N11Rik 1617 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs256686913
MGI SNP Detail
Chr5:121846697 1700064N11Rik 1600 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs218538431
MGI SNP Detail
Chr5:121846714 1700064N11Rik 1583 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs29577243
MGI SNP Detail
Chr5:121846888 1700064N11Rik 1409 bp downstream
SNP C/T C C C T T C T
rs251511273
MGI SNP Detail
Chr5:121847008 1700064N11Rik 1289 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221619241
MGI SNP Detail
Chr5:121847074 1700064N11Rik 1223 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs231242824
MGI SNP Detail
Chr5:121847192 1700064N11Rik 1105 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250251281
MGI SNP Detail
Chr5:121847198 1700064N11Rik 1099 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs219937321
MGI SNP Detail
Chr5:121847206 1700064N11Rik 1091 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244595081
MGI SNP Detail
Chr5:121847269 1700064N11Rik 1028 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264008701
MGI SNP Detail
Chr5:121847318 1700064N11Rik 979 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs227067777
MGI SNP Detail
Chr5:121847348 1700064N11Rik 949 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240493359
MGI SNP Detail
Chr5:121847350 1700064N11Rik 947 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259841750
MGI SNP Detail
Chr5:121847446 1700064N11Rik 851 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225616098
MGI SNP Detail
Chr5:121847455 1700064N11Rik 842 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245200701
MGI SNP Detail
Chr5:121847477 1700064N11Rik 820 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs223259491
MGI SNP Detail
Chr5:121847520 1700064N11Rik 777 bp downstream
SNP G/T T G
rs227774250
MGI SNP Detail
Chr5:121847540 1700064N11Rik 757 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254236078
MGI SNP Detail
Chr5:121847595 1700064N11Rik 702 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218113182
MGI SNP Detail
Chr5:121847597 1700064N11Rik 700 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs235545001
MGI SNP Detail
Chr5:121847618 1700064N11Rik 679 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs244352947
MGI SNP Detail
Chr5:121847631 1700064N11Rik 666 bp downstream
SNP C/T T C
rs216214928
MGI SNP Detail
Chr5:121847658 1700064N11Rik 639 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs231630374
MGI SNP Detail
Chr5:121847670 1700064N11Rik 627 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250285918
MGI SNP Detail
Chr5:121847716 1700064N11Rik 581 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219765504
MGI SNP Detail
Chr5:121847778 1700064N11Rik 519 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs235174140
MGI SNP Detail
Chr5:121847815 1700064N11Rik 482 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263640895
MGI SNP Detail
Chr5:121847856 1700064N11Rik 441 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs226300473
MGI SNP Detail
Chr5:121847879 1700064N11Rik 418 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240528162
MGI SNP Detail
Chr5:121847882 1700064N11Rik 415 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs259881961
MGI SNP Detail
Chr5:121847887 1700064N11Rik 410 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs219473105
MGI SNP Detail
Chr5:121847916 1700064N11Rik 381 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs239561390
MGI SNP Detail
Chr5:121848025 1700064N11Rik 272 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs262864169
MGI SNP Detail
Chr5:121848075 1700064N11Rik 222 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs228390634
MGI SNP Detail
Chr5:121848092 1700064N11Rik 205 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250066109
MGI SNP Detail
Chr5:121848094 1700064N11Rik 203 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs265951507
MGI SNP Detail
Chr5:121848112 1700064N11Rik 185 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583418579
MGI SNP Detail
Chr5:121848130 1700064N11Rik 167 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213388577
MGI SNP Detail
Chr5:121848141 1700064N11Rik 156 bp downstream
SNP C/T C T
rs245613893
MGI SNP Detail
Chr5:121848148 1700064N11Rik 149 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs216249064
MGI SNP Detail
Chr5:121848149 1700064N11Rik 148 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs587183945
MGI SNP Detail
Chr5:121848150 1700064N11Rik 147 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs231665216
MGI SNP Detail
Chr5:121848185 1700064N11Rik 112 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs581219706
MGI SNP Detail
Chr5:121848270 1700064N11Rik 27 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs256551473
MGI SNP Detail
Chr5:121848294 1700064N11Rik 3 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212283104
MGI SNP Detail
Chr5:121848418 1700064N11Rik within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs237039324
MGI SNP Detail
Chr5:121848427 1700064N11Rik within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs260016739
MGI SNP Detail
Chr5:121848436 1700064N11Rik within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217128870
MGI SNP Detail
Chr5:121848471 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A T A A A A A A A A A A A A
rs233419028
MGI SNP Detail
Chr5:121848486 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs253604803
MGI SNP Detail
Chr5:121848511 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs219504210
MGI SNP Detail
Chr5:121848535 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs239599244
MGI SNP Detail
Chr5:121848569 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs260825216
MGI SNP Detail
Chr5:121848677 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584704546
MGI SNP Detail
Chr5:121848776 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221294260
MGI SNP Detail
Chr5:121848789 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs245270173
MGI SNP Detail
Chr5:121848832 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264090189
MGI SNP Detail
Chr5:121848858 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP C/T C C C C C C C C C T C C C C C C C C C T C C T C C C T T T C C C C T C T C C T T T C T C C C C C T C C C T
rs3681649
MGI SNP Detail
Chr5:121848882 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP C/G G C
rs239258383
MGI SNP Detail
Chr5:121848899 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs258508894
MGI SNP Detail
Chr5:121848995 1700064N11Rik within coordinates of
Rr619651 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225744538
MGI SNP Detail
Chr5:121849166 1700064N11Rik within coordinates of
Cpgi16531 within coordinates of
Rr619651 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs251870305
MGI SNP Detail
Chr5:121849192 1700064N11Rik within coordinates of
Cpgi16531 within coordinates of
Rr619651 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240568135
MGI SNP Detail
Chr5:121849268 1700064N11Rik within coordinates of
Cpgi16531 within coordinates of
Rr619651 within coordinates of
SNP C/G G C
rs229133790
MGI SNP Detail
Chr5:121849293 1700064N11Rik within coordinates of
Cpgi16531 within coordinates of
Rr619651 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T C T T T T
rs258975781
MGI SNP Detail
Chr5:121849300 1700064N11Rik within coordinates of
Cpgi16531 within coordinates of
Rr619651 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs217179150
MGI SNP Detail
Alliance Variant
Chr5:121849448 1700064N11Rik within coordinates of
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619651 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233470216
MGI SNP Detail
Alliance Variant
Chr5:121849464 1700064N11Rik within coordinates of
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619651 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253274903
MGI SNP Detail
Alliance Variant
Chr5:121849473 1700064N11Rik within coordinates of
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619651 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T C T T T T T T C T T T T T T C T T T T
rs213330573
MGI SNP Detail
Alliance Variant
Chr5:121849502 1700064N11Rik within coordinates of
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619651 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs238994108
MGI SNP Detail
Alliance Variant
Chr5:121849513 1700064N11Rik within coordinates of
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619651 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs255454417
MGI SNP Detail
Alliance Variant
Chr5:121849631 1700064N11Rik within coordinates of
Atxn2 Intron
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619652 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs220931930
MGI SNP Detail
Alliance Variant
Chr5:121849797 1700064N11Rik within coordinates of
Atxn2 Coding-Synonymous
Atxn2 Intron
Atxn2 mRNA-UTR
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619653 within coordinates of
SNP G/T G G G G G G G G G G T G G G G G G G G G G G G G G G
rs247256543
MGI SNP Detail
Alliance Variant
Chr5:121849916 1700064N11Rik within coordinates of
Atxn2 Coding-NonSynonymous
Atxn2 Intron
Atxn2 mRNA-UTR
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619653 within coordinates of
Tssr48591 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs263850617
MGI SNP Detail
Alliance Variant
Chr5:121849995 1700064N11Rik within coordinates of
Atxn2 Coding-Synonymous
Atxn2 Intron
Atxn2 mRNA-UTR
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619653 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T
rs586854172
MGI SNP Detail
Alliance Variant
Chr5:121850085 1700064N11Rik within coordinates of
Atxn2 Coding-Synonymous
Atxn2 Intron
Atxn2 mRNA-UTR
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619653 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C
rs222829547
MGI SNP Detail
Alliance Variant
Chr5:121850127 1700064N11Rik within coordinates of
Atxn2 Coding-Synonymous
Atxn2 Intron
Atxn2 mRNA-UTR
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619653 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs581504426
MGI SNP Detail
Alliance Variant
Chr5:121850592 1700064N11Rik within coordinates of
Atxn2 Intron
Atxn2 mRNA-UTR
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619653 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs585292408
MGI SNP Detail
Alliance Variant
Chr5:121850742 1700064N11Rik within coordinates of
Atxn2 Intron
Atxn2 mRNA-UTR
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs239396176
MGI SNP Detail
Alliance Variant
Chr5:121850956 1700064N11Rik within coordinates of
Atxn2 Intron
Atxn2 mRNA-UTR
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C T C C C C C C C C C C C
rs258231661
MGI SNP Detail
Alliance Variant
Chr5:121851083 1700064N11Rik 1 bp upstream
Atxn2 Intron
Atxn2 mRNA-UTR
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619654 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G T T T T G T G T T T T T T T T T T T
rs225351566
MGI SNP Detail
Alliance Variant
Chr5:121851084 1700064N11Rik 2 bp upstream
Atxn2 Intron
Atxn2 mRNA-UTR
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619654 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T C T C T T T T T T T T T T T
rs247348936
MGI SNP Detail
Alliance Variant
Chr5:121851093 1700064N11Rik 11 bp upstream
Atxn2 Intron
Atxn2 Noncoding-Transcript-Variant
Atxn2 Splice-Site
Cpgi16531 within coordinates of
Rr619654 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261712766
MGI SNP Detail
Alliance Variant
Chr5:121851099 1700064N11Rik 17 bp upstream
Atxn2 Intron
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619654 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229602674
MGI SNP Detail
Alliance Variant
Chr5:121851291 1700064N11Rik 209 bp upstream
Atxn2 Intron
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619654 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs582089578
MGI SNP Detail
Alliance Variant
Chr5:121851298 1700064N11Rik 216 bp upstream
Atxn2 Intron
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619654 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584595093
MGI SNP Detail
Alliance Variant
Chr5:121851311 1700064N11Rik 229 bp upstream
Atxn2 Intron
Atxn2 Noncoding-Transcript-Variant
Cpgi16531 within coordinates of
Rr619654 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs578817926
MGI SNP Detail
Alliance Variant
Chr5:121851743 1700064N11Rik 661 bp upstream
Atxn2 Intron
Atxn2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 120

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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