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Mouse SNP Summary
Symbol
Name
ID 		Spag5
sperm associated antigen 5
MGI:1927470

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228361332
MGI SNP Detail		 Chr11:78190475 Gm3948 within coordinates of
Spag5 1937 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253504514
MGI SNP Detail		 Chr11:78190476 Gm3948 within coordinates of
Spag5 1936 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212024862
MGI SNP Detail		 Chr11:78190481 Gm3948 within coordinates of
Spag5 1931 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238959291
MGI SNP Detail		 Chr11:78190506 Gm3948 within coordinates of
Spag5 1906 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256976412
MGI SNP Detail		 Chr11:78190609 Gm3948 within coordinates of
Spag5 1803 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215792332
MGI SNP Detail		 Chr11:78190610 Gm3948 within coordinates of
Spag5 1802 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233753856
MGI SNP Detail		 Chr11:78190649 Gm3948 within coordinates of
Spag5 1763 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586436743
MGI SNP Detail		 Chr11:78190731 D11Seg15 within coordinates of
Gm3948 within coordinates of
Spag5 1681 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248099773
MGI SNP Detail		 Chr11:78190755 D11Seg15 within coordinates of
Gm3948 within coordinates of
Spag5 1657 bp upstream
 SNP C/T T C
rs251392344
MGI SNP Detail		 Chr11:78190760 D11Seg15 within coordinates of
Gm3948 within coordinates of
Spag5 1652 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222809493
MGI SNP Detail		 Chr11:78190787 D11Seg15 within coordinates of
Gm3948 within coordinates of
Spag5 1625 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240914227
MGI SNP Detail		 Chr11:78190790 D11Seg15 within coordinates of
Gm3948 within coordinates of
Spag5 1622 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28229997
MGI SNP Detail		 Chr11:78190881 Gm3948 within coordinates of
Spag5 1531 bp upstream
 SNP C/T C C C C C C T C C C T C C C C
rs220941267
MGI SNP Detail		 Chr11:78190891 Gm3948 within coordinates of
Spag5 1521 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264383926
MGI SNP Detail		 Chr11:78190932 Gm3948 within coordinates of
Spag5 1480 bp upstream
 SNP A/G G A
rs262529593
MGI SNP Detail		 Chr11:78190988 Gm3948 within coordinates of
Spag5 1424 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224492000
MGI SNP Detail		 Chr11:78191068 Gm3948 within coordinates of
Spag5 1344 bp upstream
 SNP C/G C G
rs241492857
MGI SNP Detail		 Chr11:78191100 Gm3948 within coordinates of
Spag5 1312 bp upstream
 SNP C/T T C
rs261102821
MGI SNP Detail		 Chr11:78191177 Gm3948 within coordinates of
Spag5 1235 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs228394669
MGI SNP Detail		 Chr11:78191204 Gm3948 within coordinates of
Spag5 1208 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs249589243
MGI SNP Detail		 Chr11:78191361 Gm3948 within coordinates of
Spag5 1051 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211714205
MGI SNP Detail		 Chr11:78191437 Gm3948 within coordinates of
Spag5 975 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257962646
MGI SNP Detail		 Chr11:78191578 Gm3948 within coordinates of
Spag5 834 bp upstream
 SNP C/T T C
rs230906311
MGI SNP Detail		 Chr11:78191683 Gm3948 within coordinates of
Spag5 729 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255208752
MGI SNP Detail		 Chr11:78191701 Gm3948 within coordinates of
Spag5 711 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215853262
MGI SNP Detail		 Chr11:78191703 Gm3948 within coordinates of
Spag5 709 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A
rs232733955
MGI SNP Detail		 Chr11:78191733 Gm3948 within coordinates of
Spag5 679 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253050608
MGI SNP Detail		 Chr11:78191764 Gm3948 within coordinates of
Spag5 648 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs217438016
MGI SNP Detail		 Chr11:78191832 Gm3948 within coordinates of
Rr451928 within coordinates of
Spag5 580 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242269043
MGI SNP Detail		 Chr11:78191896 Gm3948 within coordinates of
Rr451928 within coordinates of
Spag5 516 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256391571
MGI SNP Detail		 Chr11:78192008 Gm3948 within coordinates of
Rr451928 within coordinates of
Spag5 404 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220177340
MGI SNP Detail		 Chr11:78192080 Gm3948 within coordinates of
Rr451928 within coordinates of
Spag5 332 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237479933
MGI SNP Detail		 Chr11:78192250 Cpgi3341 within coordinates of
Gm3948 within coordinates of
Rr402761 within coordinates of
Rr451928 within coordinates of
Spag5 162 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262208310
MGI SNP Detail		 Chr11:78192280 Cpgi3341 within coordinates of
Gm3948 within coordinates of
Rr402761 within coordinates of
Rr451928 within coordinates of
Spag5 132 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222190665
MGI SNP Detail		 Chr11:78192310 Cpgi3341 within coordinates of
Gm3948 within coordinates of
Rr402761 within coordinates of
Rr451928 within coordinates of
Spag5 102 bp upstream
Tssr109389 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240793354
MGI SNP Detail		 Chr11:78192315 Cpgi3341 within coordinates of
Gm3948 within coordinates of
Rr402761 within coordinates of
Rr451929 within coordinates of
Spag5 97 bp upstream
Tssr109389 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261462059
MGI SNP Detail		 Chr11:78192317 Cpgi3341 within coordinates of
Gm3948 within coordinates of
Rr402761 within coordinates of
Rr451929 within coordinates of
Spag5 95 bp upstream
Tssr109389 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs226897463
MGI SNP Detail
Alliance Variant		 Chr11:78192364 Cpgi3341 within coordinates of
Rr402761 within coordinates of
Rr451929 within coordinates of
Spag5 mRNA-UTR
 SNP G/T T G
rs28229996
MGI SNP Detail
Alliance Variant		 Chr11:78192470 Cpgi3341 within coordinates of
Rr402761 within coordinates of
Rr451929 within coordinates of
Spag5 mRNA-UTR
Spag5 Noncoding-Transcript-Variant
 SNP A/G A A A A A A G A A A G G A A A A
rs244737896
MGI SNP Detail
Alliance Variant		 Chr11:78192621 Cpgi3341 within coordinates of
Rr451929 within coordinates of
Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs261271761
MGI SNP Detail
Alliance Variant		 Chr11:78192649 Cpgi3341 within coordinates of
Rr451929 within coordinates of
Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs28229995
MGI SNP Detail
Alliance Variant		 Chr11:78192677 Cpgi3341 within coordinates of
Rr451929 within coordinates of
Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP C/G G G G G G C G G G C G G G
rs250723098
MGI SNP Detail
Alliance Variant		 Chr11:78192688 Cpgi3341 within coordinates of
Rr451929 within coordinates of
Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs28229994
MGI SNP Detail
Alliance Variant		 Chr11:78192811 Rr451929 within coordinates of
Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP G/T G G G G G G T G G G T T G G T G T
rs28229993
MGI SNP Detail
Alliance Variant		 Chr11:78192975 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C A C
rs247332193
MGI SNP Detail
Alliance Variant		 Chr11:78193095 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A T A A A A
rs216521264
MGI SNP Detail
Alliance Variant		 Chr11:78193160 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239698134
MGI SNP Detail
Alliance Variant		 Chr11:78193235 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs234319547
MGI SNP Detail
Alliance Variant		 Chr11:78193276 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP C/T T C
rs212144563
MGI SNP Detail
Alliance Variant		 Chr11:78193354 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582435846
MGI SNP Detail
Alliance Variant		 Chr11:78193504 D11Bhm49 within coordinates of
Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G A G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G G A A G
rs239084335
MGI SNP Detail
Alliance Variant		 Chr11:78193601 D11Bhm49 within coordinates of
Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251244558
MGI SNP Detail
Alliance Variant		 Chr11:78193655 D11Bhm49 within coordinates of
Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234328747
MGI SNP Detail
Alliance Variant		 Chr11:78193903 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A T A A A A A A A T T A A A A A A A A
rs255557566
MGI SNP Detail
Alliance Variant		 Chr11:78194092 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs585625876
MGI SNP Detail
Alliance Variant		 Chr11:78194340 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T
rs226495022
MGI SNP Detail
Alliance Variant		 Chr11:78194358 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C
rs28229992
MGI SNP Detail
Alliance Variant		 Chr11:78194802 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T A
rs264541170
MGI SNP Detail
Alliance Variant		 Chr11:78194832 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28229991
MGI SNP Detail
Alliance Variant		 Chr11:78194856 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/T A A A A T A A T T A A T A A
rs216364914
MGI SNP Detail
Alliance Variant		 Chr11:78194900 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/C C A
rs28229990
MGI SNP Detail
Alliance Variant		 Chr11:78194954 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C A C
rs227492108
MGI SNP Detail
Alliance Variant		 Chr11:78194981 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP C/T T C
rs257716880
MGI SNP Detail
Alliance Variant		 Chr11:78194986 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226832615
MGI SNP Detail
Alliance Variant		 Chr11:78195135 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247394441
MGI SNP Detail
Alliance Variant		 Chr11:78195136 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs243704820
MGI SNP Detail
Alliance Variant		 Chr11:78195297 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP C/G C G
rs258913885
MGI SNP Detail
Alliance Variant		 Chr11:78195305 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C A C C C C
rs229075436
MGI SNP Detail
Alliance Variant		 Chr11:78195320 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs249011349
MGI SNP Detail
Alliance Variant		 Chr11:78195397 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs212469233
MGI SNP Detail
Alliance Variant		 Chr11:78195399 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs28229989
MGI SNP Detail
Alliance Variant		 Chr11:78195442 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G A G
rs245081456
MGI SNP Detail
Alliance Variant		 Chr11:78195483 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215973375
MGI SNP Detail
Alliance Variant		 Chr11:78195523 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234394145
MGI SNP Detail
Alliance Variant		 Chr11:78195526 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255617356
MGI SNP Detail
Alliance Variant		 Chr11:78195540 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218491824
MGI SNP Detail
Alliance Variant		 Chr11:78195576 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237477690
MGI SNP Detail
Alliance Variant		 Chr11:78195582 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs255709339
MGI SNP Detail
Alliance Variant		 Chr11:78195584 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs222896960
MGI SNP Detail
Alliance Variant		 Chr11:78195615 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C T C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C T C C C C C T T C
rs28229988
MGI SNP Detail
Alliance Variant		 Chr11:78195678 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G A G G A G
rs28229987
MGI SNP Detail
Alliance Variant		 Chr11:78195693 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G A G G G A G G G G
rs583090050
MGI SNP Detail
Alliance Variant		 Chr11:78195707 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220458182
MGI SNP Detail
Alliance Variant		 Chr11:78195753 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28229986
MGI SNP Detail
Alliance Variant		 Chr11:78195754 Spag5 Coding-NonSynonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G A G
rs265921099
MGI SNP Detail
Alliance Variant		 Chr11:78195822 Spag5 Coding-Synonymous
Spag5 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs228670062
MGI SNP Detail
Alliance Variant		 Chr11:78195885 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs28229985
MGI SNP Detail
Alliance Variant		 Chr11:78195908 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G C G
rs28229984
MGI SNP Detail
Alliance Variant		 Chr11:78196084 Spag5 Coding-Synonymous
Spag5 mRNA-UTR
Spag5 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T C T
rs231426586
MGI SNP Detail
Alliance Variant		 Chr11:78196160 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs245136820
MGI SNP Detail
Alliance Variant		 Chr11:78196231 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs216028803
MGI SNP Detail
Alliance Variant		 Chr11:78196236 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227400875
MGI SNP Detail
Alliance Variant		 Chr11:78196242 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248841830
MGI SNP Detail
Alliance Variant		 Chr11:78196262 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218569729
MGI SNP Detail
Alliance Variant		 Chr11:78196265 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235749588
MGI SNP Detail
Alliance Variant		 Chr11:78196278 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261124608
MGI SNP Detail
Alliance Variant		 Chr11:78196282 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215052032
MGI SNP Detail
Alliance Variant		 Chr11:78196295 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231264046
MGI SNP Detail
Alliance Variant		 Chr11:78196303 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251745922
MGI SNP Detail
Alliance Variant		 Chr11:78196304 Spag5 Intron
Spag5 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
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Showing SNP(s) 1 - 100 of 498
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
07/22/2025
MGI 6.24 		The Jackson Laboratory
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