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Mouse SNP Summary
Symbol
Name
ID 		H3c2
H3 clustered histone 2
MGI:2448319

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Showing SNP(s) 1 - 100 of 136

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233941464
MGI SNP Detail		 Chr13:23934352 H3c2 1976 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29759512
MGI SNP Detail		 Chr13:23934411 H3c2 1917 bp upstream
 SNP A/C C C C C C A C A A C C A C A A C A A
rs220322163
MGI SNP Detail		 Chr13:23934476 H3c2 1852 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29799131
MGI SNP Detail		 Chr13:23934510 H3c2 1818 bp upstream
 SNP C/T C C C C T C T C C T C T T C T C
rs261694633
MGI SNP Detail		 Chr13:23934532 H3c2 1796 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs221239453
MGI SNP Detail		 Chr13:23934545 H3c2 1783 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243721425
MGI SNP Detail		 Chr13:23934553 H3c2 1775 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs264282348
MGI SNP Detail		 Chr13:23934604 H3c2 1724 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs228366011
MGI SNP Detail		 Chr13:23934708 H3c2 1620 bp upstream
Rr475938 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs240942250
MGI SNP Detail		 Chr13:23934733 H3c2 1595 bp upstream
Rr475938 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29800304
MGI SNP Detail		 Chr13:23934832 H3c2 1496 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP A/G A A A A G A G A A G A G G A G A
rs259076813
MGI SNP Detail		 Chr13:23934833 H3c2 1495 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226503798
MGI SNP Detail		 Chr13:23934875 H3c2 1453 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250607155
MGI SNP Detail		 Chr13:23934895 H3c2 1433 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs583870135
MGI SNP Detail		 Chr13:23934908 H3c2 1420 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs586318633
MGI SNP Detail		 Chr13:23934909 H3c2 1419 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580101077
MGI SNP Detail		 Chr13:23934915 H3c2 1413 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29800307
MGI SNP Detail		 Chr13:23934920 H3c2 1408 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP G/T G G G G T G G G T G T T G T G
rs227936608
MGI SNP Detail		 Chr13:23934955 H3c2 1373 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260370159
MGI SNP Detail		 Chr13:23934967 H3c2 1361 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs29800310
MGI SNP Detail		 Chr13:23934983 H3c2 1345 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP G/T G G G G G G G G T G T T G T G
rs233640214
MGI SNP Detail		 Chr13:23935004 H3c2 1324 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs251252486
MGI SNP Detail		 Chr13:23935025 H3c2 1303 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214790446
MGI SNP Detail		 Chr13:23935052 H3c2 1276 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
Tssr118860 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs238533094
MGI SNP Detail		 Chr13:23935060 H3c2 1268 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
Tssr118860 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256601425
MGI SNP Detail
Alliance Variant		 Chr13:23935064 H2ac4 mRNA-UTR
H3c2 1264 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
Tssr118860 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220422964
MGI SNP Detail
Alliance Variant		 Chr13:23935067 H2ac4 mRNA-UTR
H3c2 1261 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
Tssr118860 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240956149
MGI SNP Detail
Alliance Variant		 Chr13:23935080 H2ac4 mRNA-UTR
H3c2 1248 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221190448
MGI SNP Detail
Alliance Variant		 Chr13:23935083 H2ac4 mRNA-UTR
H3c2 1245 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP C/T C T
rs222406207
MGI SNP Detail
Alliance Variant		 Chr13:23935085 H2ac4 mRNA-UTR
H3c2 1243 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243654011
MGI SNP Detail
Alliance Variant		 Chr13:23935091 H2ac4 mRNA-UTR
H3c2 1237 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
Tssr118861 within coordinates of
 SNP C/T C T
rs258760579
MGI SNP Detail
Alliance Variant		 Chr13:23935101 H2ac4 mRNA-UTR
H3c2 1227 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
Tssr118861 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220283095
MGI SNP Detail
Alliance Variant		 Chr13:23935114 H2ac4 mRNA-UTR
H3c2 1214 bp upstream
Rr403663 within coordinates of
Rr475938 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs245912552
MGI SNP Detail
Alliance Variant		 Chr13:23935130 H2ac4 Coding-Synonymous
H3c2 1198 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs583572098
MGI SNP Detail
Alliance Variant		 Chr13:23935154 H2ac4 Coding-Synonymous
H3c2 1174 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29963821
MGI SNP Detail
Alliance Variant		 Chr13:23935199 H2ac4 Coding-Synonymous
H3c2 1129 bp upstream
 SNP A/G G G A
rs29760794
MGI SNP Detail
Alliance Variant		 Chr13:23935211 H2ac4 Coding-Synonymous
H3c2 1117 bp upstream
 SNP C/T C C T
rs587128343
MGI SNP Detail
Alliance Variant		 Chr13:23935265 H2ac4 Coding-Synonymous
H3c2 1063 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs29252112
MGI SNP Detail
Alliance Variant		 Chr13:23935277 H2ac4 Coding-Synonymous
H3c2 1051 bp upstream
 SNP C/T T T C T
rs29784377
MGI SNP Detail
Alliance Variant		 Chr13:23935322 H2ac4 Coding-Synonymous
H3c2 1006 bp upstream
 SNP C/T T T C T
rs227699142
MGI SNP Detail
Alliance Variant		 Chr13:23935505 Cpgi5374 within coordinates of
H2ac4 Coding-Synonymous
H3c2 823 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264249856
MGI SNP Detail
Alliance Variant		 Chr13:23935514 Cpgi5374 within coordinates of
H2ac4 mRNA-UTR
H3c2 814 bp upstream
 SNP C/G C G
rs583416585
MGI SNP Detail
Alliance Variant		 Chr13:23935516 Cpgi5374 within coordinates of
H2ac4 mRNA-UTR
H3c2 812 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214464663
MGI SNP Detail
Alliance Variant		 Chr13:23935523 Cpgi5374 within coordinates of
H2ac4 mRNA-UTR
H3c2 805 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs236604797
MGI SNP Detail
Alliance Variant		 Chr13:23935532 Cpgi5374 within coordinates of
H2ac4 mRNA-UTR
H3c2 796 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs254670491
MGI SNP Detail		 Chr13:23935584 Cpgi5374 within coordinates of
H3c2 744 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586891181
MGI SNP Detail		 Chr13:23935648 H3c2 680 bp upstream
 SNP A/G A A A A A A A A G A A A A A A A G G A G A A G A A A A G G A A G A G G A G A A A G A A A A G A G G A A A A
rs234071921
MGI SNP Detail		 Chr13:23935654 H3c2 674 bp upstream
 SNP A/G G A
rs243397841
MGI SNP Detail		 Chr13:23935671 H3c2 657 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29800313
MGI SNP Detail		 Chr13:23935681 H3c2 647 bp upstream
 SNP A/G A A A G A G A A G A G G A G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222468001
MGI SNP Detail		 Chr13:23935689 H3c2 639 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234531890
MGI SNP Detail		 Chr13:23935715 H3c2 613 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs252537892
MGI SNP Detail		 Chr13:23935727 H3c2 601 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29801326
MGI SNP Detail		 Chr13:23935740 H3c2 588 bp upstream
 SNP A/G G G G G A G A G G A G A A G A G
rs243168953
MGI SNP Detail		 Chr13:23935749 H3c2 579 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs264855779
MGI SNP Detail		 Chr13:23935792 H3c2 536 bp upstream
Rr475941 within coordinates of
 SNP G/T T T T T T T T T G T T T T T T T G G T G T T G T T T T G G T T G T G G T G T T T G T T T T G T G G T T T T
rs220313639
MGI SNP Detail		 Chr13:23935803 H3c2 525 bp upstream
Rr475941 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29801329
MGI SNP Detail		 Chr13:23935817 H3c2 511 bp upstream
Rr475941 within coordinates of
 SNP A/G G G G G A G A G G A A A G G
rs258807491
MGI SNP Detail		 Chr13:23935821 H3c2 507 bp upstream
Rr475941 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29801332
MGI SNP Detail		 Chr13:23935883 H3c2 445 bp upstream
Rr475941 within coordinates of
 SNP A/C C C C C A C A C C A C A A C A C
rs29802265
MGI SNP Detail		 Chr13:23935895 H3c2 433 bp upstream
Rr475941 within coordinates of
 SNP A/C A A A A C A C A A C A C C A C A
rs256453902
MGI SNP Detail		 Chr13:23935949 H3c2 379 bp upstream
Rr475941 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230304008
MGI SNP Detail		 Chr13:23936029 H3c2 299 bp upstream
Rr475941 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213845817
MGI SNP Detail		 Chr13:23936093 H3c2 235 bp upstream
Rr403664 within coordinates of
Rr475941 within coordinates of
 SNP C/T C T
rs212744633
MGI SNP Detail		 Chr13:23936145 H3c2 183 bp upstream
Rr403664 within coordinates of
Rr475941 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240679555
MGI SNP Detail		 Chr13:23936150 H3c2 178 bp upstream
Rr403664 within coordinates of
Rr475941 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29802268
MGI SNP Detail		 Chr13:23936246 H3c2 82 bp upstream
Rr403664 within coordinates of
Rr475941 within coordinates of
 SNP C/G C C C C G C G C C G C G G C G C
rs216164808
MGI SNP Detail
Alliance Variant		 Chr13:23936338 H3c2 mRNA-UTR
Rr403664 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs234593868
MGI SNP Detail
Alliance Variant		 Chr13:23936345 H3c2 mRNA-UTR
Rr403664 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252591290
MGI SNP Detail
Alliance Variant		 Chr13:23936360 H3c2 mRNA-UTR
Rr403664 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs29802271
MGI SNP Detail
Alliance Variant		 Chr13:23936362 H3c2 mRNA-UTR
Rr403664 within coordinates of
 SNP C/T C C C C T C T C C T C T T C T C
rs237663563
MGI SNP Detail
Alliance Variant		 Chr13:23936389 H3c2 Coding-Synonymous
 SNP C/T T T T T C T T C T T C C C C C C T C T T C T T T T C C T C T C C T C T T T C T T T T C T C T T C
rs255914766
MGI SNP Detail
Alliance Variant		 Chr13:23936401 H3c2 Coding-Synonymous
 SNP C/T T T T T T C T T C T T C C C C C C T C T T C T T T C C C T C T C C T C T T T C T T T T C T C T T C T
rs580715990
MGI SNP Detail
Alliance Variant		 Chr13:23936410 H3c2 Coding-Synonymous
 SNP C/T C C C C C C C C T C C C C C C C C C C C C C C C T T C T C C T C C C C C C C C T C T C C C C C
rs220106724
MGI SNP Detail
Alliance Variant		 Chr13:23936416 H3c2 Coding-Synonymous
 SNP C/T T T T T C T T T T T C C C C T T T T T C T T T C T T T T T T T T T T C T T T T T T T C T T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29569832
MGI SNP Detail
Alliance Variant		 Chr13:23936629 H3c2 Coding-Synonymous
 SNP C/T T T C
rs29803214
MGI SNP Detail
Alliance Variant		 Chr13:23936743 H3c2 Coding-Synonymous
 SNP C/G C C C C G C G C C G C G G C G C
rs221355449
MGI SNP Detail
Alliance Variant		 Chr13:23936749 H3c2 Coding-Synonymous
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239057334
MGI SNP Detail
Alliance Variant		 Chr13:23936782 H3c2 mRNA-UTR
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256531448
MGI SNP Detail		 Chr13:23936879 H3c2 56 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs230146727
MGI SNP Detail		 Chr13:23936880 H3c2 57 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245143126
MGI SNP Detail		 Chr13:23936896 H3c2 73 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29803217
MGI SNP Detail		 Chr13:23936937 H3c2 114 bp downstream
 SNP C/T C C C C T C T C C T C T T C T C
rs235781381
MGI SNP Detail		 Chr13:23936960 H3c2 137 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253907816
MGI SNP Detail		 Chr13:23936969 H3c2 146 bp downstream
 SNP A/C C A
rs29803220
MGI SNP Detail		 Chr13:23936971 H3c2 148 bp downstream
 SNP C/G C C C C C G C G C C G C G G C G G
rs227644210
MGI SNP Detail		 Chr13:23936992 H3c2 169 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245937660
MGI SNP Detail		 Chr13:23936998 H3c2 175 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214888560
MGI SNP Detail		 Chr13:23937009 H3c2 186 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235932088
MGI SNP Detail		 Chr13:23937011 H3c2 188 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29232424
MGI SNP Detail		 Chr13:23937037 H3c2 214 bp downstream
 SNP C/T T T T T T C T C C T T C T C C T C C
rs211727541
MGI SNP Detail		 Chr13:23937040 H3c2 217 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs235213822
MGI SNP Detail		 Chr13:23937043 H3c2 220 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs29804195
MGI SNP Detail		 Chr13:23937062 H3c2 239 bp downstream
 SNP A/T T T T T A T A T T A T A A T A T
rs221393623
MGI SNP Detail		 Chr13:23937076 H3c2 253 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239121410
MGI SNP Detail		 Chr13:23937077 H3c2 254 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29617140
MGI SNP Detail		 Chr13:23937080 H3c2 257 bp downstream
 SNP C/G C C C C C C G C C C C C C G
rs29804200
MGI SNP Detail		 Chr13:23937092 H3c2 269 bp downstream
 SNP A/G G G G G A G G A A A G G
rs29804203
MGI SNP Detail		 Chr13:23937139 H3c2 316 bp downstream
 SNP C/G C C C C G C G C C G G G C C
rs222372278
MGI SNP Detail		 Chr13:23937155 H3c2 332 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 100 of 136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory