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Mouse SNP Summary
Symbol
Name
ID 		Or5o1
olfactory receptor family 5 subfamily N member 1
MGI:3031155

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249840550
MGI SNP Detail		 ChrX:48813889 Or5o1 1961 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs213378635
MGI SNP Detail		 ChrX:48813897 Or5o1 1953 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs581190034
MGI SNP Detail		 ChrX:48814045 Or5o1 1805 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31167482
MGI SNP Detail		 ChrX:48814050 Or5o1 1800 bp downstream
 SNP A/G G A G G A
rs262570566
MGI SNP Detail		 ChrX:48814067 Or5o1 1783 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30224340
MGI SNP Detail		 ChrX:48814091 Or5o1 1759 bp downstream
 SNP A/C A A A A A A C A A A C A A C A
rs234906651
MGI SNP Detail		 ChrX:48814163 Or5o1 1687 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253147483
MGI SNP Detail		 ChrX:48814186 Or5o1 1664 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs223690852
MGI SNP Detail		 ChrX:48814271 Or5o1 1579 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G A G G G G G G A G G G G G G G A G G G G
rs242393904
MGI SNP Detail		 ChrX:48814370 Or5o1 1480 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256655076
MGI SNP Detail		 ChrX:48814383 Or5o1 1467 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs219753561
MGI SNP Detail		 ChrX:48814396 Or5o1 1454 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243731516
MGI SNP Detail		 ChrX:48814407 Or5o1 1443 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584893020
MGI SNP Detail		 ChrX:48814439 Or5o1 1411 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs587451813
MGI SNP Detail		 ChrX:48814447 Or5o1 1403 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs264972958
MGI SNP Detail		 ChrX:48814490 Or5o1 1360 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221280007
MGI SNP Detail		 ChrX:48814528 Or5o1 1322 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs581679908
MGI SNP Detail		 ChrX:48814616 Or5o1 1234 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs30224343
MGI SNP Detail		 ChrX:48814758 Or5o1 1092 bp downstream
 SNP A/G A A A A A A A A A A G A A A A
rs238947926
MGI SNP Detail		 ChrX:48814769 Or5o1 1081 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259759405
MGI SNP Detail		 ChrX:48814860 Or5o1 990 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228214924
MGI SNP Detail		 ChrX:48814904 Or5o1 946 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254211355
MGI SNP Detail		 ChrX:48815082 Or5o1 768 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585366328
MGI SNP Detail		 ChrX:48815311 Or5o1 539 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261475397
MGI SNP Detail		 ChrX:48815318 Or5o1 532 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs578393526
MGI SNP Detail		 ChrX:48815330 Or5o1 520 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580800606
MGI SNP Detail		 ChrX:48815380 Or5o1 470 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs52104220
MGI SNP Detail		 ChrX:48815448 Or5o1 402 bp downstream
 SNP C/T C C T
rs228362690
MGI SNP Detail		 ChrX:48815482 Or5o1 368 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251588789
MGI SNP Detail		 ChrX:48815599 Or5o1 251 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs584271384
MGI SNP Detail		 ChrX:48815714 Or5o1 136 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30225196
MGI SNP Detail		 ChrX:48815766 Or5o1 84 bp downstream
 SNP A/C C C C C C C C C C C A C C A C
rs234984861
MGI SNP Detail		 ChrX:48815790 Or5o1 60 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A G
rs246650178
MGI SNP Detail		 ChrX:48815798 Or5o1 52 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs217720191
MGI SNP Detail		 ChrX:48815827 Or5o1 23 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30225199
MGI SNP Detail		 ChrX:48815992 Or5o1 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs261799470
MGI SNP Detail		 ChrX:48816014 Or5o1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30225201
MGI SNP Detail		 ChrX:48816249 Or5o1 within coordinates of
 SNP A/G G G G G G G G G G G A G G G G
rs220920511
MGI SNP Detail		 ChrX:48816339 Or5o1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs239382418
MGI SNP Detail		 ChrX:48816393 Or5o1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs30226154
MGI SNP Detail		 ChrX:48816402 Or5o1 within coordinates of
 SNP C/T T T T T T T T C C T T T T C T T C C T
rs221147625
MGI SNP Detail		 ChrX:48816600 Or5o1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239025478
MGI SNP Detail		 ChrX:48816654 Or5o1 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs259620777
MGI SNP Detail		 ChrX:48816863 Or5o1 54 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30226157
MGI SNP Detail		 ChrX:48816878 Or5o1 69 bp upstream
 SNP G/T T T T T T T G T T T T T T T T
rs242041754
MGI SNP Detail		 ChrX:48816931 Or5o1 122 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108587952
MGI SNP Detail		 ChrX:48816952 Or5o1 143 bp upstream
 SNP C/T C T
rs230879976
MGI SNP Detail		 ChrX:48817001 Or5o1 192 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255206590
MGI SNP Detail		 ChrX:48817122 Or5o1 313 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257646246
MGI SNP Detail		 ChrX:48817195 Or5o1 386 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228128211
MGI SNP Detail		 ChrX:48817215 Or5o1 406 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs246717067
MGI SNP Detail		 ChrX:48817333 Or5o1 524 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217586516
MGI SNP Detail		 ChrX:48817344 Or5o1 535 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242248375
MGI SNP Detail		 ChrX:48817350 Or5o1 541 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250171650
MGI SNP Detail		 ChrX:48817363 Or5o1 554 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212548668
MGI SNP Detail		 ChrX:48817377 Or5o1 568 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237443200
MGI SNP Detail		 ChrX:48817378 Or5o1 569 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs250056918
MGI SNP Detail		 ChrX:48817380 Or5o1 571 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221206328
MGI SNP Detail		 ChrX:48817430 Or5o1 621 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232553935
MGI SNP Detail		 ChrX:48817459 Or5o1 650 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs253042721
MGI SNP Detail		 ChrX:48817473 Or5o1 664 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221816104
MGI SNP Detail		 ChrX:48817489 Or5o1 680 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244709698
MGI SNP Detail		 ChrX:48817560 Or5o1 751 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255395237
MGI SNP Detail		 ChrX:48817591 Or5o1 782 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30226160
MGI SNP Detail		 ChrX:48817604 Or5o1 795 bp upstream
 SNP C/G C C C C C C G C C C C C C C C
rs30226163
MGI SNP Detail		 ChrX:48817637 Or5o1 828 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs33877760
MGI SNP Detail		 ChrX:48817769 Or5o1 960 bp upstream
 SNP C/T C T C C T
rs582266952
MGI SNP Detail		 ChrX:48817826 Or5o1 1017 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30227096
MGI SNP Detail		 ChrX:48817890 Or5o1 1081 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs31271293
MGI SNP Detail		 ChrX:48817925 Or5o1 1116 bp upstream
 SNP A/G A A G G A
rs30227099
MGI SNP Detail		 ChrX:48817995 Or5o1 1186 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs233292831
MGI SNP Detail		 ChrX:48818017 Or5o1 1208 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254374064
MGI SNP Detail		 ChrX:48818100 Or5o1 1291 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30227102
MGI SNP Detail		 ChrX:48818134 Or5o1 1325 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs30227995
MGI SNP Detail		 ChrX:48818222 Or5o1 1413 bp upstream
 SNP A/C C C C C C C C C C C C C A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231481160
MGI SNP Detail		 ChrX:48818288 Or5o1 1479 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs244217415
MGI SNP Detail		 ChrX:48818301 Or5o1 1492 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216269541
MGI SNP Detail		 ChrX:48818310 Or5o1 1501 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233145446
MGI SNP Detail		 ChrX:48818322 Or5o1 1513 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30227998
MGI SNP Detail		 ChrX:48818327 Or5o1 1518 bp upstream
 SNP G/T T T T T T T T T T T T T T G T
rs217656530
MGI SNP Detail		 ChrX:48818338 Or5o1 1529 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30228001
MGI SNP Detail		 ChrX:48818361 Or5o1 1552 bp upstream
 SNP A/C A C A A A A C C C
rs30228854
MGI SNP Detail		 ChrX:48818363 Or5o1 1554 bp upstream
 SNP A/T A A T T
rs31199048
MGI SNP Detail		 ChrX:48818377 Or5o1 1568 bp upstream
 SNP C/T C T C T
rs30228857
MGI SNP Detail		 ChrX:48818768 Or5o1 1959 bp upstream
 SNP A/G A A A A A A A A A A A A A G A
rs245821114
MGI SNP Detail		 ChrX:48818800 Or5o1 1991 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs253451809
MGI SNP Detail		 ChrX:48818803 Or5o1 1994 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
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Showing SNP(s) 1 - 87 of 87
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory