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Mouse SNP Summary
Symbol
Name
ID 		Skint7
selection and upkeep of intraepithelial T cells 7
MGI:3041190

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Showing SNP(s) 1 - 100 of 426

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31891389
MGI SNP Detail		 Chr4:111828187 Skint7 1933 bp upstream
 SNP C/T C C C T C
rs247375314
MGI SNP Detail		 Chr4:111828227 Skint7 1893 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A G G
rs32659720
MGI SNP Detail		 Chr4:111828302 Skint7 1818 bp upstream
 SNP C/T T T C T T T
rs32304210
MGI SNP Detail		 Chr4:111828358 Skint7 1762 bp upstream
 SNP C/T T C T T C
rs32129115
MGI SNP Detail		 Chr4:111828455 Skint7 1665 bp upstream
 SNP A/G G G A G G G
rs46346189
MGI SNP Detail		 Chr4:111828464 Skint7 1656 bp upstream
 SNP T T T T T T
rs31809656
MGI SNP Detail		 Chr4:111828511 Skint7 1609 bp upstream
 SNP G/T T T G T T
rs244820770
MGI SNP Detail		 Chr4:111828572 Skint7 1548 bp upstream
 SNP C/T C C C C C C T T C T T T C C C C C C C C T C C C C C C C C C C C C C T C C C C T T C C T C T T C C C T C C
rs231333310
MGI SNP Detail		 Chr4:111828690 Skint7 1430 bp upstream
 SNP T T T
rs32872508
MGI SNP Detail		 Chr4:111828830 Skint7 1290 bp upstream
 SNP A/G A A G A A A
rs231227136
MGI SNP Detail		 Chr4:111828945 Skint7 1175 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs32446198
MGI SNP Detail		 Chr4:111829051 Skint7 1069 bp upstream
 SNP A/C A C A A A
rs48838343
MGI SNP Detail		 Chr4:111829113 Skint7 1007 bp upstream
 SNP A A A
rs249481805
MGI SNP Detail		 Chr4:111829154 Skint7 966 bp upstream
 SNP G G G
rs582968171
MGI SNP Detail		 Chr4:111829332 Skint7 788 bp upstream
 SNP A/G G A A A G G G A G A G G A G G A G A
rs586349910
MGI SNP Detail		 Chr4:111829336 Skint7 784 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs581581529
MGI SNP Detail		 Chr4:111829339 Skint7 781 bp upstream
 SNP A/G G A G G G G G G A G G A
rs584185683
MGI SNP Detail		 Chr4:111829344 Skint7 776 bp upstream
 SNP A/G A A G A A A A A A A A A A A A A A A A A A A A A A
rs587565655
MGI SNP Detail		 Chr4:111829350 Skint7 770 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G
rs581232291
MGI SNP Detail		 Chr4:111829395 Skint7 725 bp upstream
 SNP A/G G A A G A G G G G G G G A G G G G G G G G G G A G G G A G G
rs387441485
MGI SNP Detail		 Chr4:111829407 Skint7 713 bp upstream
 SNP A/G G A A A G G G A A G G A G G A G G A A A
rs217257946
MGI SNP Detail		 Chr4:111829411 Skint7 709 bp upstream
 SNP A/G A G
rs235431300
MGI SNP Detail		 Chr4:111829506 Skint7 614 bp upstream
 SNP C C C
rs52512849
MGI SNP Detail		 Chr4:111829526 Skint7 594 bp upstream
 SNP C C C C
rs52185565
MGI SNP Detail		 Chr4:111829530 Skint7 590 bp upstream
 SNP A/C A A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237940471
MGI SNP Detail		 Chr4:111829557 Skint7 563 bp upstream
 SNP A A A
rs581047134
MGI SNP Detail		 Chr4:111829569 Skint7 551 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs262505346
MGI SNP Detail		 Chr4:111829600 Skint7 520 bp upstream
 SNP A/G A G
rs387665549
MGI SNP Detail		 Chr4:111829642 Skint7 478 bp upstream
 SNP C/T T T T T C T T T C C T T T T T T T T T T T T T T C C T T T C T T
rs578544328
MGI SNP Detail		 Chr4:111829647 Skint7 473 bp upstream
 SNP A/C A A C A C C A A A A A A A A C C A A
rs52442978
MGI SNP Detail		 Chr4:111829661 Skint7 459 bp upstream
 SNP T T
rs586256387
MGI SNP Detail		 Chr4:111829681 Skint7 439 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs579291010
MGI SNP Detail		 Chr4:111829689 Skint7 431 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs582486279
MGI SNP Detail		 Chr4:111829692 Skint7 428 bp upstream
 SNP C/T C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs52589064
MGI SNP Detail		 Chr4:111829696 Skint7 424 bp upstream
 SNP C/T C C T
rs50090682
MGI SNP Detail		 Chr4:111829740 Skint7 380 bp upstream
 SNP C C C C C
rs49678673
MGI SNP Detail		 Chr4:111829743 Skint7 377 bp upstream
 SNP T T T T
rs51739560
MGI SNP Detail		 Chr4:111829775 Skint7 345 bp upstream
 SNP C C C C C
rs228753873
MGI SNP Detail		 Chr4:111829789 Skint7 331 bp upstream
 SNP A/G G G G G G G A A G A A G G G G G G G G A G G G G G G G G G G G G G A G G G G A A G G A G A A G G G A G G
rs585733454
MGI SNP Detail		 Chr4:111829804 Skint7 316 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27484860
MGI SNP Detail		 Chr4:111829843 Skint7 277 bp upstream
 SNP C/T C C C C T C T C C C C T T C C
rs47731970
MGI SNP Detail		 Chr4:111829882 Skint7 238 bp upstream
 SNP T T T T T T
rs579788809
MGI SNP Detail		 Chr4:111829918 Skint7 202 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs232629871
MGI SNP Detail		 Chr4:111829984 Skint7 136 bp upstream
 SNP A A A
rs27484859
MGI SNP Detail		 Chr4:111829989 Skint7 131 bp upstream
 SNP C/T C C C C C C T C C C C C C C
rs51164388
MGI SNP Detail		 Chr4:111830029 Skint7 91 bp upstream
 SNP T T T
rs215866960
MGI SNP Detail		 Chr4:111830030 Skint7 90 bp upstream
Tssr38394 within coordinates of
 SNP A/G G G G G G A G G G G G G A A A A G G A G G G G G G G G G A G G G G G G G A A A G G A A G G G G G G G G
rs47507587
MGI SNP Detail		 Chr4:111830035 Skint7 85 bp upstream
Tssr38394 within coordinates of
 SNP T T T T
rs50664414
MGI SNP Detail		 Chr4:111830050 Skint7 70 bp upstream
Tssr38394 within coordinates of
 SNP T T T T T
rs50342454
MGI SNP Detail		 Chr4:111830152 Skint7 within coordinates of
 SNP A/G G G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229877186
MGI SNP Detail		 Chr4:111830185 Skint7 within coordinates of
 SNP C/T T T T T T T C C T C C C T T T T T T T T C T T T T T T T T T T T T T C T T T T C C T T C T C C T T C T T
rs27484858
MGI SNP Detail		 Chr4:111830197 Skint7 within coordinates of
 SNP A/G G G G A G A G G G G G A G G G
rs51044889
MGI SNP Detail		 Chr4:111830328 Skint7 within coordinates of
 SNP T T T
rs50766585
MGI SNP Detail		 Chr4:111830363 Skint7 within coordinates of
 SNP T T T
rs241147624
MGI SNP Detail		 Chr4:111830382 Skint7 within coordinates of
 SNP C/G G G G G G C G G G G G G C C C C G C G G G G G G G G G C G G G G C C C G G C C G G G G G G G G
rs49324676
MGI SNP Detail		 Chr4:111830542 Skint7 within coordinates of
 SNP T T T
rs27484856
MGI SNP Detail		 Chr4:111830545 Skint7 within coordinates of
 SNP G/T T T G T G T T T
rs27484855
MGI SNP Detail		 Chr4:111830546 Skint7 within coordinates of
 SNP A/G G G A G G A A A A
rs50147428
MGI SNP Detail		 Chr4:111830692 Skint7 within coordinates of
 SNP A/G A A A G
rs247592094
MGI SNP Detail		 Chr4:111830820 Skint7 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G G T G G
rs48142510
MGI SNP Detail		 Chr4:111830849 Skint7 within coordinates of
 SNP A A A A A
rs47897921
MGI SNP Detail		 Chr4:111830865 Skint7 within coordinates of
 SNP T T T T T
rs27484853
MGI SNP Detail		 Chr4:111830887 Skint7 within coordinates of
 SNP A/G G G G A G A G G G A G A A A A G G
rs27484852
MGI SNP Detail		 Chr4:111830914 Skint7 within coordinates of
 SNP C/T C C C C C C C C C C C C T C C C
rs46367186
MGI SNP Detail		 Chr4:111830915 Skint7 within coordinates of
 SNP A A A A A
rs245493266
MGI SNP Detail		 Chr4:111830917 Skint7 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs45945941
MGI SNP Detail		 Chr4:111830983 Skint7 within coordinates of
 SNP G G G G G
rs234742475
MGI SNP Detail		 Chr4:111830990 Skint7 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27484851
MGI SNP Detail		 Chr4:111830999 Skint7 within coordinates of
 SNP C/T C C C C C C C C T C C
rs46594590
MGI SNP Detail		 Chr4:111831032 Skint7 within coordinates of
 SNP T T T T T
rs48115889
MGI SNP Detail		 Chr4:111831033 Skint7 within coordinates of
 SNP G G G G G
rs252071218
MGI SNP Detail		 Chr4:111831171 Skint7 within coordinates of
 SNP C/G C C C C C G G C G G C C C C C C C C G C C C C C C C C C C C C G C C C C G G C C C G C C G C C
rs32461206
MGI SNP Detail		 Chr4:111831221 Skint7 within coordinates of
 SNP C/T T C T T T
rs27484849
MGI SNP Detail		 Chr4:111831301 Skint7 within coordinates of
 SNP C/T T T T C T C C T T T C C C C T T
rs262844667
MGI SNP Detail		 Chr4:111831368 Skint7 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33851985
MGI SNP Detail		 Chr4:111831455 Skint7 within coordinates of
 SNP A/T T T A T T T
rs33015374
MGI SNP Detail		 Chr4:111831489 Skint7 within coordinates of
 SNP C/T C C T C C C
rs256451055
MGI SNP Detail		 Chr4:111831506 Skint7 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218059234
MGI SNP Detail		 Chr4:111831575 Skint7 within coordinates of
 SNP C/T C C C C C C T T C T T T C C C C C C C C T C C C C C C C C C C C C C T C C C C T T C C T C T T C C C T C C
rs238427097
MGI SNP Detail		 Chr4:111831576 Skint7 within coordinates of
 SNP A/C C C C C C C A A C A A A C C C C C C C C A C C C C C C C C C C C C C A C C C C A A C C A C A A C C C A C C
rs32432730
MGI SNP Detail		 Chr4:111831634 Skint7 within coordinates of
 SNP A/G G G A G A G
rs51086513
MGI SNP Detail		 Chr4:111831654 Skint7 within coordinates of
 SNP C/T C C T C
rs32146317
MGI SNP Detail		 Chr4:111831658 Skint7 within coordinates of
 SNP G/T G G T G T G
rs233329824
MGI SNP Detail		 Chr4:111831761 Skint7 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32384195
MGI SNP Detail		 Chr4:111831834 Skint7 within coordinates of
 SNP A/G A A G A
rs259018658
MGI SNP Detail		 Chr4:111831841 Skint7 within coordinates of
 SNP C/T C C C C C C T T C T T T C C C C C C C C T C C C C C C C C C C C C C T C C C C T T C C T C T T C C C T C C
rs32686674
MGI SNP Detail		 Chr4:111831842 Skint7 within coordinates of
 SNP C/T C C T C T C
rs223948549
MGI SNP Detail		 Chr4:111831867 Skint7 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32337687
MGI SNP Detail		 Chr4:111831890 Skint7 within coordinates of
 SNP A/G A G A G A
rs213312771
MGI SNP Detail		 Chr4:111831898 Skint7 within coordinates of
 SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs32120069
MGI SNP Detail		 Chr4:111831906 Skint7 within coordinates of
 SNP A/T A T A A A
rs32863956
MGI SNP Detail		 Chr4:111832011 Skint7 within coordinates of
 SNP A/G A G A A
rs253034829
MGI SNP Detail		 Chr4:111832211 Skint7 within coordinates of
 SNP A/T A T
rs32452654
MGI SNP Detail		 Chr4:111832223 Skint7 within coordinates of
 SNP C/T T C T T
rs239354598
MGI SNP Detail		 Chr4:111832424 Skint7 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27484848
MGI SNP Detail		 Chr4:111832482 Skint7 within coordinates of
 SNP C/T C C C C C C C C C C C C C T C C C
rs27484847
MGI SNP Detail		 Chr4:111832502 Skint7 within coordinates of
 SNP C/T T T T T T T T T T T T T C T T T
rs48361741
MGI SNP Detail		 Chr4:111832566 Skint7 within coordinates of
 SNP A A A A A
rs27484846
MGI SNP Detail		 Chr4:111832572 Skint7 within coordinates of
 SNP C/T T T T T T T T T C
rs51141887
MGI SNP Detail		 Chr4:111832585 Skint7 within coordinates of
 SNP A A A A A
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Showing SNP(s) 1 - 100 of 426
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory