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Mouse SNP Summary
Symbol
Name
ID 		n-TCgca4
nuclear encoded tRNA cysteine 4 (anticodon GCA)
MGI:4413771

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Showing SNP(s) 1 - 100 of 176

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585732957
MGI SNP Detail		 Chr6:48115469 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1947 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579818328
MGI SNP Detail		 Chr6:48115481 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1935 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583650523
MGI SNP Detail		 Chr6:48115496 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1920 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs48762822
MGI SNP Detail		 Chr6:48115547 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1869 bp downstream
 SNP G/T G G G G G G G G G G T G G T G
rs48361036
MGI SNP Detail		 Chr6:48115595 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1821 bp downstream
 SNP C/T T T T T T T T T T T T T C T
rs587387129
MGI SNP Detail		 Chr6:48115691 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1725 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580260085
MGI SNP Detail		 Chr6:48115726 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1690 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G
rs51998048
MGI SNP Detail		 Chr6:48115732 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1684 bp downstream
 SNP A/C A A A A A A C A A A A A A A
rs46783686
MGI SNP Detail		 Chr6:48115840 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1576 bp downstream
 SNP C/G G G G G G G G G G G C G G C G
rs258123263
MGI SNP Detail		 Chr6:48115857 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1559 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46921929
MGI SNP Detail		 Chr6:48115861 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1555 bp downstream
 SNP C/T T T T T T T T T T T C T T C T
rs49140386
MGI SNP Detail		 Chr6:48115873 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1543 bp downstream
 SNP G/T G G G G G G G G G G T G G T G
rs254430797
MGI SNP Detail		 Chr6:48115925 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1491 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs212795928
MGI SNP Detail		 Chr6:48115929 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1487 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs584010657
MGI SNP Detail		 Chr6:48115935 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1481 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs47018173
MGI SNP Detail		 Chr6:48115978 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1438 bp downstream
 SNP G/T T T T T T T T T T T G T T G T
rs257506922
MGI SNP Detail		 Chr6:48115995 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1421 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs221857009
MGI SNP Detail		 Chr6:48116010 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1406 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs246129435
MGI SNP Detail		 Chr6:48116016 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1400 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs48541239
MGI SNP Detail		 Chr6:48116024 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1392 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs47720557
MGI SNP Detail		 Chr6:48116107 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1309 bp downstream
 SNP A/T T T T T T T T T T T A T T A T
rs241816098
MGI SNP Detail		 Chr6:48116160 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1256 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs587216463
MGI SNP Detail		 Chr6:48116167 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1249 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs580700720
MGI SNP Detail		 Chr6:48116193 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1223 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs259435333
MGI SNP Detail		 Chr6:48116205 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1211 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229239460
MGI SNP Detail		 Chr6:48116228 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1188 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244137881
MGI SNP Detail		 Chr6:48116237 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1179 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs262802071
MGI SNP Detail		 Chr6:48116256 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1160 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs230275405
MGI SNP Detail		 Chr6:48116276 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1140 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs247448416
MGI SNP Detail		 Chr6:48116284 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1132 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs584044780
MGI SNP Detail		 Chr6:48116301 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1115 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs215345980
MGI SNP Detail		 Chr6:48116343 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1073 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs229118637
MGI SNP Detail		 Chr6:48116347 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 1069 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs47743322
MGI SNP Detail		 Chr6:48116429 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 987 bp downstream
 SNP A/C A A A A A A A A A A C A A C A
rs213253268
MGI SNP Detail		 Chr6:48116431 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 985 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs234623236
MGI SNP Detail		 Chr6:48116500 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca10 within coordinates of
n-TCgca4 916 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs262425629
MGI SNP Detail		 Chr6:48116594 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 822 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213395454
MGI SNP Detail		 Chr6:48116597 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 819 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48006660
MGI SNP Detail		 Chr6:48116599 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 817 bp downstream
 SNP A/G G G G G G G G G G G A G G A G
rs51208239
MGI SNP Detail		 Chr6:48116621 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 795 bp downstream
 SNP C/T C C C C C C C C C C T C C T C
rs48214727
MGI SNP Detail		 Chr6:48116657 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 759 bp downstream
 SNP A/G G G G G G G G G G G A G G A G
rs222423402
MGI SNP Detail		 Chr6:48116703 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 713 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs46288248
MGI SNP Detail		 Chr6:48116708 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 708 bp downstream
 SNP A/G A A A A A A A A A A G A A G A
rs252795109
MGI SNP Detail		 Chr6:48116715 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 701 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs48443993
MGI SNP Detail		 Chr6:48116776 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 640 bp downstream
 SNP A/T T T T T T T T T T T A T T A T
rs241694279
MGI SNP Detail		 Chr6:48116809 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 607 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265386338
MGI SNP Detail		 Chr6:48116812 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 604 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222688366
MGI SNP Detail		 Chr6:48116817 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 599 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs48857899
MGI SNP Detail		 Chr6:48116887 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 529 bp downstream
 SNP A/T A A A A A A A A A A T A A T A
rs259302402
MGI SNP Detail		 Chr6:48116891 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 525 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229351881
MGI SNP Detail		 Chr6:48116905 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 511 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs247900197
MGI SNP Detail		 Chr6:48116913 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 503 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs45878898
MGI SNP Detail		 Chr6:48116990 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 426 bp downstream
 SNP A/G A A A A A A G A A A A A A
rs48496632
MGI SNP Detail		 Chr6:48117011 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 405 bp downstream
 SNP G/T G G G G G G G G G G T G G T G
rs251530746
MGI SNP Detail		 Chr6:48117031 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 385 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214172608
MGI SNP Detail		 Chr6:48117038 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 378 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233287376
MGI SNP Detail		 Chr6:48117040 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 376 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs244944252
MGI SNP Detail		 Chr6:48117051 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 365 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs47114704
MGI SNP Detail		 Chr6:48117052 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 364 bp downstream
 SNP A/G G G G G G G G G G G A G G A G
rs234062452
MGI SNP Detail		 Chr6:48117075 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 341 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T A T T T T T T A T T T T T T T T T T T T
rs248676444
MGI SNP Detail		 Chr6:48117078 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 338 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G T G G G G G G T G G G G G G G G G G G G
rs222036793
MGI SNP Detail		 Chr6:48117081 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 335 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs236581419
MGI SNP Detail		 Chr6:48117129 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 287 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs258225465
MGI SNP Detail		 Chr6:48117132 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 284 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs49127781
MGI SNP Detail		 Chr6:48117138 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 278 bp downstream
 SNP G/T T T T T T T G T T T G T T G T
rs241346307
MGI SNP Detail		 Chr6:48117175 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 241 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259132502
MGI SNP Detail		 Chr6:48117189 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 227 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs223508406
MGI SNP Detail		 Chr6:48117192 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 224 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs242201568
MGI SNP Detail		 Chr6:48117202 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 214 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs264904285
MGI SNP Detail		 Chr6:48117227 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 189 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580996791
MGI SNP Detail		 Chr6:48117235 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 181 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584847251
MGI SNP Detail		 Chr6:48117245 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 171 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs583054371
MGI SNP Detail		 Chr6:48117257 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 159 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582677441
MGI SNP Detail		 Chr6:48117258 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 158 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227552813
MGI SNP Detail		 Chr6:48117263 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 153 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256073911
MGI SNP Detail		 Chr6:48117271 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 145 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs47687866
MGI SNP Detail		 Chr6:48117284 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 132 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs227515304
MGI SNP Detail		 Chr6:48117291 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 125 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs50005729
MGI SNP Detail		 Chr6:48117309 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 107 bp downstream
 SNP C/T T T T T T T T T T T C T T C T
rs48257366
MGI SNP Detail		 Chr6:48117320 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 96 bp downstream
 SNP C/T T T T T T T C T T T C T T C T
rs233983480
MGI SNP Detail		 Chr6:48117348 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 68 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs49159517
MGI SNP Detail		 Chr6:48117374 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 42 bp downstream
 SNP C/T T T T T T T C T T T C T T C T
rs211918892
MGI SNP Detail		 Chr6:48117408 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 8 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs234960236
MGI SNP Detail		 Chr6:48117418 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262584053
MGI SNP Detail		 Chr6:48117423 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs219901525
MGI SNP Detail		 Chr6:48117454 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235199021
MGI SNP Detail		 Chr6:48117486 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs253207995
MGI SNP Detail		 Chr6:48117487 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223557308
MGI SNP Detail		 Chr6:48117489 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242065803
MGI SNP Detail		 Chr6:48117578 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 89 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G A G G G G
rs265031361
MGI SNP Detail		 Chr6:48117593 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 104 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580144706
MGI SNP Detail		 Chr6:48117616 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 127 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227434826
MGI SNP Detail		 Chr6:48117624 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 135 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583894368
MGI SNP Detail		 Chr6:48117631 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 142 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587357965
MGI SNP Detail		 Chr6:48117636 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 147 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239242553
MGI SNP Detail		 Chr6:48117639 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 150 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580402114
MGI SNP Detail		 Chr6:48117640 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 151 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259834032
MGI SNP Detail		 Chr6:48117641 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 152 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228044522
MGI SNP Detail		 Chr6:48117648 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 159 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs49081869
MGI SNP Detail		 Chr6:48117657 Gm16630 within coordinates of
Gm30435 within coordinates of
n-TCgca4 168 bp upstream
 SNP C/T C C C C C C C C C C T C C T C
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Showing SNP(s) 1 - 100 of 176
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory