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Mouse SNP Summary
Symbol
Name
ID 		Gm40879
predicted gene, 40879
MGI:5623764

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Showing SNP(s) 1 - 100 of 124

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47826756
MGI SNP Detail		 Chr12:18267970 Gm40879 1960 bp upstream
 SNP C/T T T T C C C C T T
rs256846461
MGI SNP Detail		 Chr12:18268052 Gm40879 1878 bp upstream
 SNP A/C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs583084267
MGI SNP Detail		 Chr12:18268141 Gm40879 1789 bp upstream
 SNP C/T C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs222562357
MGI SNP Detail		 Chr12:18268150 Gm40879 1780 bp upstream
 SNP C/T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T C T T
rs586945991
MGI SNP Detail		 Chr12:18268155 Gm40879 1775 bp upstream
 SNP A/C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs244434145
MGI SNP Detail		 Chr12:18268334 Gm40879 1596 bp upstream
 SNP C/T C T
rs265150378
MGI SNP Detail		 Chr12:18268385 Gm40879 1545 bp upstream
 SNP A/G G A
rs47135503
MGI SNP Detail		 Chr12:18268532 Gm40879 1398 bp upstream
 SNP A/G A A A G A G G G G
rs232694388
MGI SNP Detail		 Chr12:18268538 Gm40879 1392 bp upstream
 SNP A/G G A
rs242335236
MGI SNP Detail		 Chr12:18268554 Gm40879 1376 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs245606427
MGI SNP Detail		 Chr12:18268719 Gm40879 1211 bp upstream
 SNP A/T A T
rs227392857
MGI SNP Detail		 Chr12:18268871 Gm40879 1059 bp upstream
 SNP C/T C C C T C C C C T T T T T T T C C C T T T C C T T C T C C C C C C C
rs260293322
MGI SNP Detail		 Chr12:18268923 Gm40879 1007 bp upstream
 SNP C/T C T
rs228510163
MGI SNP Detail		 Chr12:18268937 Gm40879 993 bp upstream
 SNP C/T C T
rs243175275
MGI SNP Detail		 Chr12:18269027 Gm40879 903 bp upstream
 SNP C/T C T
rs212174731
MGI SNP Detail		 Chr12:18269035 Gm40879 895 bp upstream
 SNP G/T G T
rs249046891
MGI SNP Detail		 Chr12:18269045 Gm40879 885 bp upstream
 SNP C/T T T T C T C C C C C C C T C C C C C C T T
rs212716472
MGI SNP Detail		 Chr12:18269071 Gm40879 859 bp upstream
 SNP C/T T C C C C C C C C C C T C C C C C
rs234302569
MGI SNP Detail		 Chr12:18269079 Gm40879 851 bp upstream
 SNP G/T T T T G T G G G G G G G G T T T G G G G T T
rs253151009
MGI SNP Detail		 Chr12:18269164 Gm40879 766 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214911572
MGI SNP Detail		 Chr12:18269167 Gm40879 763 bp upstream
 SNP C/T C C C T T C C C T T T T T T T C C T T C C T C C T T C T C C T C T C C C C C
rs52389839
MGI SNP Detail		 Chr12:18269216 Gm40879 714 bp upstream
 SNP A/G A A A G G A A A A
rs578284164
MGI SNP Detail		 Chr12:18269266 Gm40879 664 bp upstream
 SNP A/G G G A A A G G G A A A A A A A A G A A G A A A A A G G A G A A G G
rs108721838
MGI SNP Detail		 Chr12:18269335 Gm40879 595 bp upstream
 SNP G G G
rs107988648
MGI SNP Detail		 Chr12:18269350 Gm40879 580 bp upstream
 SNP G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108488517
MGI SNP Detail		 Chr12:18269360 Gm40879 570 bp upstream
 SNP C/T C T
rs49561506
MGI SNP Detail		 Chr12:18269373 Gm40879 557 bp upstream
 SNP A/G A A A A A A G A A A A A
rs108177868
MGI SNP Detail		 Chr12:18269408 Gm40879 522 bp upstream
 SNP A A A
rs107634236
MGI SNP Detail		 Chr12:18269489 Gm40879 441 bp upstream
 SNP C C C C
rs108853828
MGI SNP Detail		 Chr12:18269508 Gm40879 422 bp upstream
 SNP A A A A
rs46324909
MGI SNP Detail		 Chr12:18269522 Gm40879 408 bp upstream
 SNP A/G A A A A G A A A A A
rs108121077
MGI SNP Detail		 Chr12:18269529 Gm40879 401 bp upstream
 SNP G G G
rs107956927
MGI SNP Detail		 Chr12:18269553 Gm40879 377 bp upstream
 SNP T T T T
rs108119557
MGI SNP Detail		 Chr12:18269637 Gm40879 293 bp upstream
 SNP T T T
rs107881878
MGI SNP Detail		 Chr12:18269757 Gm40879 173 bp upstream
 SNP C C C
rs47076640
MGI SNP Detail		 Chr12:18269816 Gm40879 114 bp upstream
 SNP A/G A A G G G A A A A A G G G A G G A G
rs107697297
MGI SNP Detail		 Chr12:18269853 Gm40879 77 bp upstream
 SNP A A A
rs580717919
MGI SNP Detail		 Chr12:18269862 Gm40879 68 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G
rs107634947
MGI SNP Detail		 Chr12:18269867 Gm40879 63 bp upstream
 SNP T T T
rs108303856
MGI SNP Detail		 Chr12:18269872 Gm40879 58 bp upstream
 SNP A A A
rs584632573
MGI SNP Detail		 Chr12:18269926 Gm40879 4 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C
rs578830765
MGI SNP Detail		 Chr12:18269974 Gm40879 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G
rs107984447
MGI SNP Detail		 Chr12:18270052 Gm40879 within coordinates of
 SNP G G G
rs108728671
MGI SNP Detail		 Chr12:18270123 Gm40879 within coordinates of
 SNP C C C
rs582518937
MGI SNP Detail		 Chr12:18270146 Gm40879 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A
rs108306911
MGI SNP Detail		 Chr12:18270184 Gm40879 within coordinates of
 SNP G G G
rs586246756
MGI SNP Detail		 Chr12:18270235 Gm40879 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G
rs48473649
MGI SNP Detail		 Chr12:18270290 Gm40879 within coordinates of
 SNP G/T T G G G G T T T T G G T G G G
rs108746686
MGI SNP Detail		 Chr12:18270374 Gm40879 within coordinates of
 SNP A/G A G A
rs107769090
MGI SNP Detail		 Chr12:18270407 Gm40879 within coordinates of
 SNP A/T A T A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579082164
MGI SNP Detail		 Chr12:18270458 Gm40879 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582540380
MGI SNP Detail		 Chr12:18270565 Gm40879 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs108845640
MGI SNP Detail		 Chr12:18270600 Gm40879 within coordinates of
 SNP C/T C T C
rs240951755
MGI SNP Detail		 Chr12:18270841 Gm40879 within coordinates of
 SNP A/G G G G A G G G A A A A A A A G G G G A G A A G A G G G G G G G G
rs107610582
MGI SNP Detail		 Chr12:18270918 Gm40879 within coordinates of
 SNP C C
rs108739207
MGI SNP Detail		 Chr12:18270929 Gm40879 within coordinates of
 SNP C/T C T
rs586365849
MGI SNP Detail		 Chr12:18271002 Gm40879 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A
rs46668097
MGI SNP Detail		 Chr12:18271003 Gm40879 within coordinates of
 SNP A/G A A G A A A A A G G A G G G
rs108796279
MGI SNP Detail		 Chr12:18271051 Gm40879 within coordinates of
 SNP C/G C G C
rs234462513
MGI SNP Detail		 Chr12:18271066 Gm40879 within coordinates of
 SNP A/G G G G A G G G A A A A A A A G G G G A A G A G G G G
rs107748473
MGI SNP Detail		 Chr12:18271247 Gm40879 within coordinates of
 SNP A A
rs261354215
MGI SNP Detail		 Chr12:18271253 Gm40879 within coordinates of
 SNP C C C C C C C C C C C C C
rs250546192
MGI SNP Detail		 Chr12:18271263 Gm40879 within coordinates of
 SNP A/G G A
rs579403399
MGI SNP Detail		 Chr12:18271400 Gm40879 within coordinates of
 SNP A/G G G G G G G G G G G A G G G G G G
rs387160256
MGI SNP Detail		 Chr12:18271433 Gm40879 within coordinates of
 SNP T T T T T T T T T T T T T T
rs585744109
MGI SNP Detail		 Chr12:18271447 Gm40879 within coordinates of
 SNP G G G G G G G G G G G G G G
rs580024543
MGI SNP Detail		 Chr12:18271506 Gm40879 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C
rs583503223
MGI SNP Detail		 Chr12:18271537 Gm40879 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587115771
MGI SNP Detail		 Chr12:18271540 Gm40879 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs581327521
MGI SNP Detail		 Chr12:18271575 Gm40879 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G
rs387628186
MGI SNP Detail		 Chr12:18271582 Gm40879 within coordinates of
 SNP A/T A A T T T T T T T T T T T T T T T
rs587555428
MGI SNP Detail		 Chr12:18271740 Gm40879 within coordinates of
 SNP A/G A A A G A A A A G G G G G G G A A A A G G A G A G G A G A A A A A A
rs580637623
MGI SNP Detail		 Chr12:18271805 Gm40879 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs387322498
MGI SNP Detail		 Chr12:18271916 Gm40879 within coordinates of
 SNP A/T T T T A T T T T A A A A A A A A T T T T A A T A T T T T T T T
rs49683471
MGI SNP Detail		 Chr12:18271942 Gm40879 within coordinates of
 SNP C/G C G G G C C C C G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235817105
MGI SNP Detail		 Chr12:18271974 Gm40879 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs386842275
MGI SNP Detail		 Chr12:18272035 Gm40879 within coordinates of
 SNP A/T T A A T T A A A A A A A T T A A T T A A T A T T T T T T A
rs387304479
MGI SNP Detail		 Chr12:18272041 Gm40879 within coordinates of
 SNP A/G A G G G A A G G G G G G G A G G A G G A G A A A A A G
rs255662601
MGI SNP Detail		 Chr12:18272058 Gm40879 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs221390131
MGI SNP Detail		 Chr12:18272092 Gm40879 within coordinates of
 SNP C/T C C T T T C C C T T T T T T T C T C T T C T C C C C C T
rs259414609
MGI SNP Detail		 Chr12:18272170 Gm40879 within coordinates of
 SNP A/T A A A T A A T T T T T T T A A T T T A T T T A T A A
rs107963897
MGI SNP Detail		 Chr12:18272305 Gm40879 within coordinates of
 SNP G/T T G
rs584693493
MGI SNP Detail		 Chr12:18272676 Gm40879 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C
rs578857706
MGI SNP Detail		 Chr12:18272755 Gm40879 within coordinates of
 SNP C/T T C T T C C C C C C C T T T C T T C C T C T T T T T T T
rs582506793
MGI SNP Detail		 Chr12:18272830 Gm40879 within coordinates of
 SNP A/G G G G G G A G G G G G A A A A A A A G G G G G G G G G G G G A G A G G G G G G G G G G G G
rs107813443
MGI SNP Detail		 Chr12:18272954 Gm40879 within coordinates of
 SNP C/T T C C
rs238660652
MGI SNP Detail		 Chr12:18272987 Gm40879 within coordinates of
 SNP C/T T C C T T T T T T T T C T T C T C C C C
rs584869454
MGI SNP Detail		 Chr12:18272993 Gm40879 within coordinates of
 SNP C/T C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C
rs579398340
MGI SNP Detail		 Chr12:18272994 Gm40879 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs108821121
MGI SNP Detail		 Chr12:18273014 Gm40879 within coordinates of
 SNP A A
rs581933082
MGI SNP Detail		 Chr12:18273026 Gm40879 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262416839
MGI SNP Detail		 Chr12:18273105 Gm40879 within coordinates of
 SNP C/T C C C T C C C C T T T T T T T C C C C C C T T C T C C C C C C C C
rs108369232
MGI SNP Detail		 Chr12:18273143 Gm40879 within coordinates of
 SNP A/C C A
rs108065075
MGI SNP Detail		 Chr12:18273242 Gm40879 within coordinates of
 SNP G G G
rs49550683
MGI SNP Detail		 Chr12:18273267 Gm40879 within coordinates of
 SNP C/T T T C C C T T T T C T C C
rs108495087
MGI SNP Detail		 Chr12:18273284 Gm40879 within coordinates of
 SNP C/T T C
rs108735099
MGI SNP Detail		 Chr12:18273334 Gm40879 within coordinates of
 SNP C/G C G
rs107619798
MGI SNP Detail		 Chr12:18273353 Gm40879 within coordinates of
 SNP C C C
rs254775584
MGI SNP Detail		 Chr12:18273693 Gm40879 within coordinates of
 SNP G/T G G T T T T G T T T T T T T G G T T T G T T T T G T T T T T T G G G T
rs228298791
MGI SNP Detail		 Chr12:18273750 Gm40879 37 bp downstream
 SNP C/T C C T T T T C T T T T T T T T T T C T T T T T T T T T T T C T T T
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Showing SNP(s) 1 - 100 of 124
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory