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Mouse SNP Summary
Symbol
Name
ID 		Cpgi1138
CpG island 1138
MGI:5666267

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Showing SNP(s) 1 - 100 of 147

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32384057
MGI SNP Detail		 Chr1:181667152 Cpgi1138 1905 bp proximal
Lbr within coordinates of
 SNP A/G G A G G
rs224138078
MGI SNP Detail		 Chr1:181667174 Cpgi1138 1883 bp proximal
Lbr within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A T A A A T
rs248774355
MGI SNP Detail		 Chr1:181667179 Cpgi1138 1878 bp proximal
Lbr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs260125121
MGI SNP Detail		 Chr1:181667242 Cpgi1138 1815 bp proximal
Lbr within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A T A A A A A A A A A A A A A A T
rs222829682
MGI SNP Detail		 Chr1:181667272 Cpgi1138 1785 bp proximal
Lbr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G
rs242855379
MGI SNP Detail		 Chr1:181667313 Cpgi1138 1744 bp proximal
Lbr within coordinates of
 SNP A/C/T C C C C C C C C C C C C C C C C C C C A C C T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs256058872
MGI SNP Detail		 Chr1:181667343 Cpgi1138 1714 bp proximal
Lbr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229676764
MGI SNP Detail		 Chr1:181667345 Cpgi1138 1712 bp proximal
Lbr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243674623
MGI SNP Detail		 Chr1:181667373 Cpgi1138 1684 bp proximal
Lbr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30936120
MGI SNP Detail		 Chr1:181667465 Cpgi1138 1592 bp proximal
Lbr within coordinates of
 SNP A/C C A C C
rs32089289
MGI SNP Detail		 Chr1:181667472 Cpgi1138 1585 bp proximal
Lbr within coordinates of
 SNP A/C C A C C
rs246208743
MGI SNP Detail		 Chr1:181667498 Cpgi1138 1559 bp proximal
Lbr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C
rs586234318
MGI SNP Detail		 Chr1:181667507 Cpgi1138 1550 bp proximal
Lbr within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216483640
MGI SNP Detail		 Chr1:181667527 Cpgi1138 1530 bp proximal
Lbr within coordinates of
Rr424801 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228993276
MGI SNP Detail		 Chr1:181667535 Cpgi1138 1522 bp proximal
Lbr within coordinates of
Rr424801 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T
rs242012650
MGI SNP Detail		 Chr1:181667606 Cpgi1138 1451 bp proximal
Lbr within coordinates of
Rr424801 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A
rs212545958
MGI SNP Detail		 Chr1:181667607 Cpgi1138 1450 bp proximal
Lbr within coordinates of
Rr424801 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A G A A A A A A A A A A G A A A G
rs237642071
MGI SNP Detail		 Chr1:181667642 Cpgi1138 1415 bp proximal
Lbr within coordinates of
Rr424801 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257872737
MGI SNP Detail		 Chr1:181667661 Cpgi1138 1396 bp proximal
Lbr within coordinates of
Rr424801 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs216122001
MGI SNP Detail		 Chr1:181667665 Cpgi1138 1392 bp proximal
Lbr within coordinates of
Rr424801 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234675656
MGI SNP Detail		 Chr1:181667673 Cpgi1138 1384 bp proximal
Lbr within coordinates of
Rr424801 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31026076
MGI SNP Detail		 Chr1:181667739 Cpgi1138 1318 bp proximal
Lbr within coordinates of
Rr424801 within coordinates of
 SNP C/T C T C C
rs222870622
MGI SNP Detail		 Chr1:181667832 Cpgi1138 1225 bp proximal
Lbr within coordinates of
 SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C T C C C G
rs242888558
MGI SNP Detail		 Chr1:181667867 Cpgi1138 1190 bp proximal
Lbr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T C T T T C
rs249782885
MGI SNP Detail		 Chr1:181667889 Cpgi1138 1168 bp proximal
Lbr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221714449
MGI SNP Detail		 Chr1:181667954 Cpgi1138 1103 bp proximal
Lbr within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs246021229
MGI SNP Detail		 Chr1:181667955 Cpgi1138 1102 bp proximal
Lbr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262976199
MGI SNP Detail		 Chr1:181667960 Cpgi1138 1097 bp proximal
Lbr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232543469
MGI SNP Detail		 Chr1:181667978 Cpgi1138 1079 bp proximal
Lbr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240325320
MGI SNP Detail		 Chr1:181668031 Cpgi1138 1026 bp proximal
Gm55354 within coordinates of
Lbr within coordinates of
Rr424802 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259287957
MGI SNP Detail		 Chr1:181668055 Cpgi1138 1002 bp proximal
Gm55354 within coordinates of
Lbr within coordinates of
Rr424802 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs229474697
MGI SNP Detail		 Chr1:181668064 Cpgi1138 993 bp proximal
Gm55354 within coordinates of
Lbr within coordinates of
Rr424802 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs242142323
MGI SNP Detail		 Chr1:181668083 Cpgi1138 974 bp proximal
Gm55354 within coordinates of
Lbr within coordinates of
Rr424802 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G
rs212964138
MGI SNP Detail		 Chr1:181668085 Cpgi1138 972 bp proximal
Gm55354 within coordinates of
Lbr within coordinates of
Rr424802 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T T T T T T
rs229486657
MGI SNP Detail		 Chr1:181668111 Cpgi1138 946 bp proximal
Gm55354 within coordinates of
Lbr within coordinates of
Rr424802 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs48902474
MGI SNP Detail		 Chr1:181668180 Cpgi1138 877 bp proximal
Lbr within coordinates of
 SNP A/G G A G
rs582362174
MGI SNP Detail		 Chr1:181668202 Cpgi1138 855 bp proximal
Lbr within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215723801
MGI SNP Detail		 Chr1:181668225 Cpgi1138 832 bp proximal
Lbr within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234713402
MGI SNP Detail		 Chr1:181668232 Cpgi1138 825 bp proximal
Lbr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T C T T T C
rs254252807
MGI SNP Detail		 Chr1:181668242 Cpgi1138 815 bp proximal
Lbr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217334988
MGI SNP Detail		 Chr1:181668288 Cpgi1138 769 bp proximal
Lbr within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs229800087
MGI SNP Detail		 Chr1:181668360 Cpgi1138 697 bp proximal
Lbr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A
rs585680599
MGI SNP Detail		 Chr1:181668364 Cpgi1138 693 bp proximal
Lbr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255691283
MGI SNP Detail		 Chr1:181668386 Cpgi1138 671 bp proximal
Lbr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31281150
MGI SNP Detail		 Chr1:181668390 Cpgi1138 667 bp proximal
Lbr within coordinates of
 SNP C/T T C T T
rs243256162
MGI SNP Detail		 Chr1:181668395 Cpgi1138 662 bp proximal
Lbr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262471571
MGI SNP Detail		 Chr1:181668416 Cpgi1138 641 bp proximal
Lbr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224574245
MGI SNP Detail		 Chr1:181668421 Cpgi1138 636 bp proximal
Lbr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240458517
MGI SNP Detail		 Chr1:181668428 Cpgi1138 629 bp proximal
Lbr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A
rs259421168
MGI SNP Detail		 Chr1:181668436 Cpgi1138 621 bp proximal
Lbr within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223021327
MGI SNP Detail		 Chr1:181668445 Cpgi1138 612 bp proximal
Lbr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579947603
MGI SNP Detail		 Chr1:181668485 Cpgi1138 572 bp proximal
Lbr within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A
rs236129484
MGI SNP Detail		 Chr1:181668508 Cpgi1138 549 bp proximal
Lbr within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A G
rs261841300
MGI SNP Detail		 Chr1:181668522 Cpgi1138 535 bp proximal
Lbr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229900976
MGI SNP Detail		 Chr1:181668536 Cpgi1138 521 bp proximal
Lbr within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C
rs583386903
MGI SNP Detail		 Chr1:181668574 Cpgi1138 483 bp proximal
Lbr within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251200164
MGI SNP Detail		 Chr1:181668583 Cpgi1138 474 bp proximal
Lbr within coordinates of
Tssr15588 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265405532
MGI SNP Detail		 Chr1:181668694 Cpgi1138 363 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A
rs586719770
MGI SNP Detail		 Chr1:181668706 Cpgi1138 351 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T
rs227819525
MGI SNP Detail		 Chr1:181668719 Cpgi1138 338 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579489789
MGI SNP Detail		 Chr1:181668724 Cpgi1138 333 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C G
rs248023360
MGI SNP Detail		 Chr1:181668739 Cpgi1138 318 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217370758
MGI SNP Detail		 Chr1:181668775 Cpgi1138 282 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C T
rs584086785
MGI SNP Detail		 Chr1:181668785 Cpgi1138 272 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T
rs229824004
MGI SNP Detail		 Chr1:181668828 Cpgi1138 229 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31738624
MGI SNP Detail		 Chr1:181668993 Cpgi1138 64 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP C/G G C
rs31283710
MGI SNP Detail		 Chr1:181668996 Cpgi1138 61 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/T A T
rs238236649
MGI SNP Detail		 Chr1:181668999 Cpgi1138 58 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31430873
MGI SNP Detail		 Chr1:181669027 Cpgi1138 30 bp proximal
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/C A C
rs220861439
MGI SNP Detail		 Chr1:181669119 Cpgi1138 within coordinates of
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A T
rs50622814
MGI SNP Detail		 Chr1:181669238 Cpgi1138 within coordinates of
Lbr within coordinates of
Rr424803 within coordinates of
 SNP G/T G T
rs252903951
MGI SNP Detail		 Chr1:181669240 Cpgi1138 within coordinates of
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/T A A A T A A A A A T A A A A A A A A A T A A T A A A A T A A A A A T T A A T A A T A T A A A A A T A A A T
rs223062166
MGI SNP Detail		 Chr1:181669471 Cpgi1138 within coordinates of
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/G A A A G A A A A A G A A A A A A A A A G A A G A A A A G A A A A G G A A G A A G A G A A A A G A A A G
rs241570719
MGI SNP Detail		 Chr1:181669557 Cpgi1138 within coordinates of
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs264923016
MGI SNP Detail		 Chr1:181669581 Cpgi1138 within coordinates of
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222351589
MGI SNP Detail		 Chr1:181669614 Cpgi1138 within coordinates of
Lbr within coordinates of
Rr424803 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246658965
MGI SNP Detail		 Chr1:181669673 Cpgi1138 within coordinates of
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G
rs263059238
MGI SNP Detail		 Chr1:181669685 Cpgi1138 within coordinates of
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs227851831
MGI SNP Detail		 Chr1:181669767 Cpgi1138 within coordinates of
Lbr within coordinates of
Rr424803 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247679885
MGI SNP Detail		 Chr1:181669786 Cpgi1138 within coordinates of
Lbr within coordinates of
Rr396678 within coordinates of
Rr424803 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261266608
MGI SNP Detail		 Chr1:181669959 Cpgi1138 within coordinates of
Rr396678 within coordinates of
Rr424804 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs224148361
MGI SNP Detail		 Chr1:181670117 Cpgi1138 within coordinates of
Rr424804 within coordinates of
Tssr10532 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs249773072
MGI SNP Detail		 Chr1:181670123 Cpgi1138 within coordinates of
Rr424804 within coordinates of
Tssr10532 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213994591
MGI SNP Detail		 Chr1:181670124 Cpgi1138 within coordinates of
Rr424804 within coordinates of
Tssr10532 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs236862517
MGI SNP Detail		 Chr1:181670143 Cpgi1138 within coordinates of
Rr424804 within coordinates of
Rr424805 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs256532555
MGI SNP Detail		 Chr1:181670202 Cpgi1138 within coordinates of
Rr424804 within coordinates of
 SNP A/G A A A G A A A A A G A A A A A A A A A G A A G A A A A G A A A A A G G A A G A A G A G A A A A G A A A
rs215339310
MGI SNP Detail		 Chr1:181670224 Cpgi1138 within coordinates of
Rr424804 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs233661084
MGI SNP Detail		 Chr1:181670431 Cpgi1138 within coordinates of
Rr424804 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252660897
MGI SNP Detail		 Chr1:181670442 Cpgi1138 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C A
rs223099557
MGI SNP Detail		 Chr1:181670529 Cpgi1138 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236659443
MGI SNP Detail		 Chr1:181670560 Cpgi1138 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T A
rs256667916
MGI SNP Detail		 Chr1:181670616 Cpgi1138 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222547651
MGI SNP Detail		 Chr1:181670710 Cpgi1138 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244438299
MGI SNP Detail		 Chr1:181670752 Cpgi1138 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252610006
MGI SNP Detail		 Chr1:181670757 Cpgi1138 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A
rs221553515
MGI SNP Detail		 Chr1:181670758 Cpgi1138 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs587375590
MGI SNP Detail		 Chr1:181670961 Cpgi1138 182 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241716530
MGI SNP Detail		 Chr1:181671079 Cpgi1138 300 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G C G G G G G G G G G G C G G G C
rs260981360
MGI SNP Detail		 Chr1:181671125 Cpgi1138 346 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227607402
MGI SNP Detail		 Chr1:181671126 Cpgi1138 347 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 147
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory