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Mouse SNP Summary
Symbol
Name
ID 		Cpgi1292
CpG island 1292
MGI:5666421

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218670800
MGI SNP Detail		 Chr10:10562792 Cpgi1292 1970 bp proximal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46140254
MGI SNP Detail		 Chr10:10562936 Cpgi1292 1826 bp proximal
Grm1 within coordinates of
 SNP C/T T T T T T T C T T T C T T C T
rs250189790
MGI SNP Detail		 Chr10:10562971 Cpgi1292 1791 bp proximal
Grm1 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs217915989
MGI SNP Detail		 Chr10:10563030 Cpgi1292 1732 bp proximal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs49075805
MGI SNP Detail		 Chr10:10563074 Cpgi1292 1688 bp proximal
Grm1 within coordinates of
 SNP A/G G G G G G G G A G G G A G A G
rs251078239
MGI SNP Detail		 Chr10:10563144 Cpgi1292 1618 bp proximal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G A G G G G
rs224866171
MGI SNP Detail		 Chr10:10563284 Cpgi1292 1478 bp proximal
Grm1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs247749687
MGI SNP Detail		 Chr10:10563304 Cpgi1292 1458 bp proximal
Grm1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs264428501
MGI SNP Detail		 Chr10:10563313 Cpgi1292 1449 bp proximal
Grm1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs235052209
MGI SNP Detail		 Chr10:10563314 Cpgi1292 1448 bp proximal
Grm1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs240946988
MGI SNP Detail		 Chr10:10563338 Cpgi1292 1424 bp proximal
Grm1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs254703029
MGI SNP Detail		 Chr10:10563400 Cpgi1292 1362 bp proximal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223608336
MGI SNP Detail		 Chr10:10563411 Cpgi1292 1351 bp proximal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs244731546
MGI SNP Detail		 Chr10:10563555 Cpgi1292 1207 bp proximal
Grm1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs213879478
MGI SNP Detail		 Chr10:10563720 Cpgi1292 1042 bp proximal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232666944
MGI SNP Detail		 Chr10:10563722 Cpgi1292 1040 bp proximal
Grm1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs51766843
MGI SNP Detail		 Chr10:10563794 Cpgi1292 968 bp proximal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C T C C C C
rs47145141
MGI SNP Detail		 Chr10:10563891 Cpgi1292 871 bp proximal
Grm1 within coordinates of
 SNP C/T T T T T T T C T T T C T T C T
rs219817527
MGI SNP Detail		 Chr10:10563945 Cpgi1292 817 bp proximal
Grm1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs242554212
MGI SNP Detail		 Chr10:10564111 Cpgi1292 651 bp proximal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250056586
MGI SNP Detail		 Chr10:10564139 Cpgi1292 623 bp proximal
Grm1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs211759745
MGI SNP Detail		 Chr10:10564339 Cpgi1292 423 bp proximal
Grm1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs581810856
MGI SNP Detail		 Chr10:10564578 Cpgi1292 184 bp proximal
Grm1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T C T T T T T C T T T T T C T T T T T T T
rs251042852
MGI SNP Detail		 Chr10:10564627 Cpgi1292 135 bp proximal
Grm1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A
rs225011606
MGI SNP Detail		 Chr10:10564656 Cpgi1292 106 bp proximal
Grm1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245134832
MGI SNP Detail		 Chr10:10564703 Cpgi1292 59 bp proximal
Grm1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264199270
MGI SNP Detail		 Chr10:10564875 Cpgi1292 within coordinates of
Grm1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225694335
MGI SNP Detail		 Chr10:10565001 Cpgi1292 within coordinates of
Grm1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G
rs236673845
MGI SNP Detail		 Chr10:10565007 Cpgi1292 within coordinates of
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254671192
MGI SNP Detail		 Chr10:10565037 Cpgi1292 within coordinates of
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223580819
MGI SNP Detail		 Chr10:10565124 Cpgi1292 within coordinates of
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238540603
MGI SNP Detail		 Chr10:10565256 Cpgi1292 within coordinates of
Grm1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262477222
MGI SNP Detail		 Chr10:10565343 Cpgi1292 within coordinates of
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs233428514
MGI SNP Detail		 Chr10:10565364 Cpgi1292 within coordinates of
Grm1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G
rs252514561
MGI SNP Detail		 Chr10:10565451 Cpgi1292 25 bp distal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs266216151
MGI SNP Detail		 Chr10:10565478 Cpgi1292 52 bp distal
Grm1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs228826423
MGI SNP Detail		 Chr10:10565562 Cpgi1292 136 bp distal
Grm1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs244629204
MGI SNP Detail		 Chr10:10565704 Cpgi1292 278 bp distal
Grm1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs211723672
MGI SNP Detail		 Chr10:10565705 Cpgi1292 279 bp distal
Grm1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232430126
MGI SNP Detail		 Chr10:10565725 Cpgi1292 299 bp distal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs244783982
MGI SNP Detail		 Chr10:10565727 Cpgi1292 301 bp distal
Grm1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs216463961
MGI SNP Detail		 Chr10:10565728 Cpgi1292 302 bp distal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239707014
MGI SNP Detail		 Chr10:10565744 Cpgi1292 318 bp distal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260755606
MGI SNP Detail		 Chr10:10565806 Cpgi1292 380 bp distal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C C
rs226074342
MGI SNP Detail		 Chr10:10565907 Cpgi1292 481 bp distal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230661889
MGI SNP Detail		 Chr10:10565942 Cpgi1292 516 bp distal
Grm1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248176924
MGI SNP Detail		 Chr10:10565984 Cpgi1292 558 bp distal
Grm1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584315305
MGI SNP Detail		 Chr10:10566090 Cpgi1292 664 bp distal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs578544025
MGI SNP Detail		 Chr10:10566189 Cpgi1292 763 bp distal
Grm1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218010958
MGI SNP Detail		 Chr10:10566228 Cpgi1292 802 bp distal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238483435
MGI SNP Detail		 Chr10:10566239 Cpgi1292 813 bp distal
Grm1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs265093910
MGI SNP Detail		 Chr10:10566250 Cpgi1292 824 bp distal
Grm1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs225100528
MGI SNP Detail		 Chr10:10566395 Cpgi1292 969 bp distal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248033990
MGI SNP Detail		 Chr10:10566430 Cpgi1292 1004 bp distal
Grm1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A
rs264540596
MGI SNP Detail		 Chr10:10566498 Cpgi1292 1072 bp distal
Grm1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs228792163
MGI SNP Detail		 Chr10:10566550 Cpgi1292 1124 bp distal
Grm1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs244598332
MGI SNP Detail		 Chr10:10566575 Cpgi1292 1149 bp distal
Grm1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs256418212
MGI SNP Detail		 Chr10:10566583 Cpgi1292 1157 bp distal
Grm1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs226240347
MGI SNP Detail		 Chr10:10566597 Cpgi1292 1171 bp distal
Grm1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs250333632
MGI SNP Detail		 Chr10:10566603 Cpgi1292 1177 bp distal
Grm1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216785861
MGI SNP Detail		 Chr10:10566655 Cpgi1292 1229 bp distal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237625805
MGI SNP Detail		 Chr10:10566717 Cpgi1292 1291 bp distal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259916950
MGI SNP Detail		 Chr10:10566735 Cpgi1292 1309 bp distal
Grm1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216543273
MGI SNP Detail		 Chr10:10566968 Cpgi1292 1542 bp distal
Grm1 within coordinates of
Rr212549 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230624549
MGI SNP Detail		 Chr10:10567028 Cpgi1292 1602 bp distal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248147422
MGI SNP Detail		 Chr10:10567090 Cpgi1292 1664 bp distal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50255527
MGI SNP Detail		 Chr10:10567123 Cpgi1292 1697 bp distal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G A G G G
rs231399490
MGI SNP Detail		 Chr10:10567202 Cpgi1292 1776 bp distal
Grm1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257125255
MGI SNP Detail		 Chr10:10567225 Cpgi1292 1799 bp distal
Grm1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs225324591
MGI SNP Detail		 Chr10:10567349 Cpgi1292 1923 bp distal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245463995
MGI SNP Detail		 Chr10:10567353 Cpgi1292 1927 bp distal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266194549
MGI SNP Detail		 Chr10:10567366 Cpgi1292 1940 bp distal
Grm1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222957415
MGI SNP Detail		 Chr10:10567406 Cpgi1292 1980 bp distal
Grm1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 73 of 73
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory