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Mouse SNP Summary
Symbol
Name
ID 		Cpgi2948
CpG island 2948
MGI:5668051

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48628330
MGI SNP Detail		 Chr11:58883098 Cpgi2948 1972 bp proximal
Gm74293 within coordinates of
 SNP A/T T A A T
rs26971710
MGI SNP Detail		 Chr11:58883152 Cpgi2948 1918 bp proximal
Gm74293 within coordinates of
 SNP G/T G G T G G G T G T T T T G T T G
rs26971709
MGI SNP Detail		 Chr11:58883170 Cpgi2948 1900 bp proximal
Gm74293 within coordinates of
 SNP A/G A A G A A G G G G A G G G A
rs579991747
MGI SNP Detail		 Chr11:58883216 Cpgi2948 1854 bp proximal
Gm74293 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs46211446
MGI SNP Detail		 Chr11:58883247 Cpgi2948 1823 bp proximal
Gm74293 within coordinates of
 SNP C/T C T T C T
rs51452262
MGI SNP Detail		 Chr11:58883263 Cpgi2948 1807 bp proximal
Gm74293 within coordinates of
 SNP A/G A G G A A
rs47045423
MGI SNP Detail		 Chr11:58883321 Cpgi2948 1749 bp proximal
Gm74293 within coordinates of
 SNP C/T T C C T C
rs584022965
MGI SNP Detail		 Chr11:58883376 Cpgi2948 1694 bp proximal
Gm74293 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247106776
MGI SNP Detail		 Chr11:58883402 Cpgi2948 1668 bp proximal
Gm74293 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C A C C A A C C C C C C C C C C C A
rs217030889
MGI SNP Detail		 Chr11:58883524 Cpgi2948 1546 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233891682
MGI SNP Detail		 Chr11:58883575 Cpgi2948 1495 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245553703
MGI SNP Detail		 Chr11:58883609 Cpgi2948 1461 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215079304
MGI SNP Detail		 Chr11:58883616 Cpgi2948 1454 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238381197
MGI SNP Detail		 Chr11:58883619 Cpgi2948 1451 bp proximal
Gm74293 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs587192577
MGI SNP Detail		 Chr11:58883696 Cpgi2948 1374 bp proximal
Gm74293 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs26971708
MGI SNP Detail		 Chr11:58883713 Cpgi2948 1357 bp proximal
Gm74293 within coordinates of
 SNP A/G A A G A A A G A A G G G A G A A
rs580384228
MGI SNP Detail		 Chr11:58883740 Cpgi2948 1330 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220288605
MGI SNP Detail		 Chr11:58883754 Cpgi2948 1316 bp proximal
Gm74293 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236494096
MGI SNP Detail		 Chr11:58883816 Cpgi2948 1254 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs26971707
MGI SNP Detail		 Chr11:58883817 Cpgi2948 1253 bp proximal
Gm74293 within coordinates of
 SNP A/G G G A G G G A G G A A A A G A A G
rs251676197
MGI SNP Detail		 Chr11:58883849 Cpgi2948 1221 bp proximal
Gm74293 within coordinates of
 SNP A/C A C
rs26971706
MGI SNP Detail		 Chr11:58883902 Cpgi2948 1168 bp proximal
Gm74293 within coordinates of
 SNP C/T C T C C C T T T C C T T C
rs26971705
MGI SNP Detail		 Chr11:58883931 Cpgi2948 1139 bp proximal
Gm74293 within coordinates of
 SNP A/T A A A A A A A A A A T
rs265483968
MGI SNP Detail		 Chr11:58884019 Cpgi2948 1051 bp proximal
Gm74293 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs46745213
MGI SNP Detail		 Chr11:58884038 Cpgi2948 1032 bp proximal
Gm74293 within coordinates of
 SNP C/T C T C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245771849
MGI SNP Detail		 Chr11:58884059 Cpgi2948 1011 bp proximal
Gm74293 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261840202
MGI SNP Detail		 Chr11:58884139 Cpgi2948 931 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227831878
MGI SNP Detail		 Chr11:58884190 Cpgi2948 880 bp proximal
Gm74293 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C C T T T T T T T T T T T T T T T
rs29393105
MGI SNP Detail		 Chr11:58884224 Cpgi2948 846 bp proximal
Gm74293 within coordinates of
 SNP A/G G G A G G G
rs258596928
MGI SNP Detail		 Chr11:58884241 Cpgi2948 829 bp proximal
Gm74293 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs26971704
MGI SNP Detail		 Chr11:58884267 Cpgi2948 803 bp proximal
Gm74293 within coordinates of
 SNP A/G G A G G G G G A G G G A
rs245612127
MGI SNP Detail		 Chr11:58884268 Cpgi2948 802 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215598052
MGI SNP Detail		 Chr11:58884317 Cpgi2948 753 bp proximal
Gm74293 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs26971703
MGI SNP Detail		 Chr11:58884343 Cpgi2948 727 bp proximal
Gm74293 within coordinates of
 SNP C/T C C T C C C T T T T T T C T C T T C C
rs26971702
MGI SNP Detail		 Chr11:58884435 Cpgi2948 635 bp proximal
Gm74293 within coordinates of
 SNP A/T T A T T T A A A A T A T A A T T
rs212227535
MGI SNP Detail		 Chr11:58884452 Cpgi2948 618 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236559983
MGI SNP Detail		 Chr11:58884455 Cpgi2948 615 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs254550075
MGI SNP Detail		 Chr11:58884456 Cpgi2948 614 bp proximal
Gm74293 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs26971701
MGI SNP Detail		 Chr11:58884471 Cpgi2948 599 bp proximal
Gm74293 within coordinates of
 SNP C/T T C T T T C C C C C C C C C T
rs233960214
MGI SNP Detail		 Chr11:58884472 Cpgi2948 598 bp proximal
Gm74293 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51327548
MGI SNP Detail		 Chr11:58884476 Cpgi2948 594 bp proximal
Gm74293 within coordinates of
 SNP A/C A C C
rs223073838
MGI SNP Detail		 Chr11:58884485 Cpgi2948 585 bp proximal
Gm74293 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs243025927
MGI SNP Detail		 Chr11:58884520 Cpgi2948 550 bp proximal
Gm74293 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224203259
MGI SNP Detail		 Chr11:58884530 Cpgi2948 540 bp proximal
Gm74293 within coordinates of
 SNP T T T
rs583288914
MGI SNP Detail		 Chr11:58884540 Cpgi2948 530 bp proximal
Gm74293 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48471279
MGI SNP Detail		 Chr11:58884543 Cpgi2948 527 bp proximal
Gm74293 within coordinates of
 SNP A A A
rs586609348
MGI SNP Detail		 Chr11:58884578 Cpgi2948 492 bp proximal
Gm74293 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227283459
MGI SNP Detail		 Chr11:58884581 Cpgi2948 489 bp proximal
Gm74293 within coordinates of
 SNP C/T T T T C T C T T T C C C C C C C T T C C C T C C C C C C C T T T C C T T T T C T C C C T C C C T C T C T T
rs240571667
MGI SNP Detail		 Chr11:58884590 Cpgi2948 480 bp proximal
Gm74293 within coordinates of
 SNP C/T T C
rs46777567
MGI SNP Detail		 Chr11:58884696 Cpgi2948 374 bp proximal
Gm74293 within coordinates of
 SNP A/G A G G A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230656027
MGI SNP Detail		 Chr11:58884762 Cpgi2948 308 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250210696
MGI SNP Detail		 Chr11:58884780 Cpgi2948 290 bp proximal
Gm74293 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs26971700
MGI SNP Detail		 Chr11:58884787 Cpgi2948 283 bp proximal
Gm74293 within coordinates of
 SNP A/G A A G A A A G G G G G A G A G G A A
rs229427862
MGI SNP Detail		 Chr11:58884833 Cpgi2948 237 bp proximal
Gm74293 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs26971699
MGI SNP Detail		 Chr11:58884926 Cpgi2948 144 bp proximal
Gm74293 within coordinates of
 SNP A/T T A T T T A A T T A T T
rs46981847
MGI SNP Detail		 Chr11:58885062 Cpgi2948 8 bp proximal
Gm74293 within coordinates of
 SNP C/T T T C C
rs46667848
MGI SNP Detail		 Chr11:58885072 Cpgi2948 within coordinates of
Gm74293 within coordinates of
 SNP C C C C C C
rs50041364
MGI SNP Detail
Alliance Variant		 Chr11:58885087 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn mRNA-UTR
 SNP C/T C C T T
rs26971698
MGI SNP Detail
Alliance Variant		 Chr11:58885108 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn mRNA-UTR
 SNP C/T C C C C C C C C T
rs26971697
MGI SNP Detail
Alliance Variant		 Chr11:58885176 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Coding-Synonymous
 SNP A/G A G A A A G G G G G G G G G
rs47013558
MGI SNP Detail
Alliance Variant		 Chr11:58885235 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Coding-Synonymous
 SNP G G G
rs217862132
MGI SNP Detail
Alliance Variant		 Chr11:58885236 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Coding-Synonymous
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241409104
MGI SNP Detail
Alliance Variant		 Chr11:58885241 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Coding-NonSynonymous
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs252476196
MGI SNP Detail
Alliance Variant		 Chr11:58885257 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Coding-Synonymous
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221248647
MGI SNP Detail
Alliance Variant		 Chr11:58885268 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Coding-NonSynonymous
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47331381
MGI SNP Detail
Alliance Variant		 Chr11:58885299 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Coding-Synonymous
 SNP C C C
rs48205850
MGI SNP Detail
Alliance Variant		 Chr11:58885382 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Intron
 SNP A/G A A G A
rs48938408
MGI SNP Detail
Alliance Variant		 Chr11:58885430 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Intron
 SNP A/G G A A
rs227176550
MGI SNP Detail
Alliance Variant		 Chr11:58885469 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Intron
 SNP A A A
rs47713489
MGI SNP Detail
Alliance Variant		 Chr11:58885473 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Intron
 SNP T T T T T T
rs229485385
MGI SNP Detail
Alliance Variant		 Chr11:58885528 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Coding-Synonymous
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs26971696
MGI SNP Detail
Alliance Variant		 Chr11:58885621 Cpgi2948 within coordinates of
Gm74293 within coordinates of
Obscn Coding-Synonymous
 SNP A/G G A G G G G A G A A
rs46243861
MGI SNP Detail
Alliance Variant		 Chr11:58885682 Cpgi2948 52 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G G A A
rs47793657
MGI SNP Detail
Alliance Variant		 Chr11:58885689 Cpgi2948 59 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G A G G
rs51756498
MGI SNP Detail
Alliance Variant		 Chr11:58885700 Cpgi2948 70 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G G A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214291596
MGI SNP Detail
Alliance Variant		 Chr11:58885719 Cpgi2948 89 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs26971695
MGI SNP Detail
Alliance Variant		 Chr11:58885725 Cpgi2948 95 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G G G G G G G A G G G G G G
rs254191032
MGI SNP Detail
Alliance Variant		 Chr11:58885731 Cpgi2948 101 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C C C C C C
rs46271670
MGI SNP Detail
Alliance Variant		 Chr11:58885744 Cpgi2948 114 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP G/T G T T
rs235098180
MGI SNP Detail
Alliance Variant		 Chr11:58885756 Cpgi2948 126 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252530319
MGI SNP Detail
Alliance Variant		 Chr11:58885762 Cpgi2948 132 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G G A A A A A A A A A A A A A A A
rs48577844
MGI SNP Detail
Alliance Variant		 Chr11:58885803 Cpgi2948 173 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/T A T T
rs221308761
MGI SNP Detail
Alliance Variant		 Chr11:58885919 Cpgi2948 289 bp distal
Gm74293 within coordinates of
Obscn Coding-Synonymous
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50771570
MGI SNP Detail
Alliance Variant		 Chr11:58885949 Cpgi2948 319 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP G G G G G G
rs26971694
MGI SNP Detail
Alliance Variant		 Chr11:58885957 Cpgi2948 327 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP G/T T T G T G G G
rs26971693
MGI SNP Detail
Alliance Variant		 Chr11:58886056 Cpgi2948 426 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP G/T T T G T T T G G G G T G T G G T T
rs29461439
MGI SNP Detail
Alliance Variant		 Chr11:58886094 Cpgi2948 464 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP C/T T C T T T
rs256394455
MGI SNP Detail
Alliance Variant		 Chr11:58886096 Cpgi2948 466 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223774650
MGI SNP Detail
Alliance Variant		 Chr11:58886103 Cpgi2948 473 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G/T T T T G T G T T T G G G G G G G T T G G G G G G G G G G G T G T G G G T G G G G G G G T G G G A T G T G
rs29451438
MGI SNP Detail
Alliance Variant		 Chr11:58886107 Cpgi2948 477 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G G A G G G
rs260184101
MGI SNP Detail
Alliance Variant		 Chr11:58886109 Cpgi2948 479 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29463289
MGI SNP Detail
Alliance Variant		 Chr11:58886113 Cpgi2948 483 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP G/T T G T
rs26971692
MGI SNP Detail
Alliance Variant		 Chr11:58886320 Cpgi2948 690 bp distal
Gm74293 within coordinates of
Obscn Coding-NonSynonymous
 SNP C/G G G G G G G C G
rs29430562
MGI SNP Detail
Alliance Variant		 Chr11:58886323 Cpgi2948 693 bp distal
Gm74293 within coordinates of
Obscn Coding-Synonymous
 SNP A/G A G A
rs262443802
MGI SNP Detail
Alliance Variant		 Chr11:58886417 Cpgi2948 787 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260807759
MGI SNP Detail
Alliance Variant		 Chr11:58886468 Cpgi2948 838 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP C/T C T
rs220957288
MGI SNP Detail
Alliance Variant		 Chr11:58886476 Cpgi2948 846 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP T T T
rs587289689
MGI SNP Detail
Alliance Variant		 Chr11:58886499 Cpgi2948 869 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP G/T T T T G T G T T T G G G G G G G T T G G G T G G G G G G G T T T G G T T T T G T G G G T G G G T G T G T T
rs241230878
MGI SNP Detail
Alliance Variant		 Chr11:58886505 Cpgi2948 875 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP T T T
rs26971691
MGI SNP Detail
Alliance Variant		 Chr11:58886529 Cpgi2948 899 bp distal
Gm74293 within coordinates of
Obscn Intron
 SNP A/G G A G G G A A A G A G A A G G
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Showing SNP(s) 1 - 100 of 125
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory