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Mouse SNP Summary
Symbol
Name
ID 		Cpgi3698
CpG island 3698
MGI:5668800

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579516036
MGI SNP Detail
Alliance Variant		 Chr11:97304434 Arhgap23 Intron
Cpgi3698 1891 bp proximal
Gm57393 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A
rs584191673
MGI SNP Detail
Alliance Variant		 Chr11:97304440 Arhgap23 Intron
Cpgi3698 1885 bp proximal
Gm57393 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs587416300
MGI SNP Detail
Alliance Variant		 Chr11:97304466 Arhgap23 Intron
Cpgi3698 1859 bp proximal
Gm57393 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580397061
MGI SNP Detail
Alliance Variant		 Chr11:97304468 Arhgap23 Intron
Cpgi3698 1857 bp proximal
Gm57393 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C G G C C C C C C C C C C C C G G
rs216400165
MGI SNP Detail
Alliance Variant		 Chr11:97304584 Arhgap23 Intron
Cpgi3698 1741 bp proximal
Gm57393 within coordinates of
 SNP G G G
rs583669780
MGI SNP Detail
Alliance Variant		 Chr11:97304603 Arhgap23 Intron
Cpgi3698 1722 bp proximal
Gm57393 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581037026
MGI SNP Detail
Alliance Variant		 Chr11:97304657 Arhgap23 Intron
Cpgi3698 1668 bp proximal
Gm57393 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs581048125
MGI SNP Detail
Alliance Variant		 Chr11:97304665 Arhgap23 Intron
Cpgi3698 1660 bp proximal
Gm57393 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs250304908
MGI SNP Detail
Alliance Variant		 Chr11:97304688 Arhgap23 Intron
Cpgi3698 1637 bp proximal
Gm57393 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs217853514
MGI SNP Detail
Alliance Variant		 Chr11:97304714 Arhgap23 Intron
Cpgi3698 1611 bp proximal
Gm57393 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs244826314
MGI SNP Detail
Alliance Variant		 Chr11:97304722 Arhgap23 Intron
Cpgi3698 1603 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs263962731
MGI SNP Detail
Alliance Variant		 Chr11:97304793 Arhgap23 Intron
Cpgi3698 1532 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234920576
MGI SNP Detail
Alliance Variant		 Chr11:97304854 Arhgap23 Intron
Cpgi3698 1471 bp proximal
Gm57393 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs245233931
MGI SNP Detail
Alliance Variant		 Chr11:97304879 Arhgap23 Intron
Cpgi3698 1446 bp proximal
Gm57393 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G C G G G G G G G G G C G C G G
rs259974263
MGI SNP Detail
Alliance Variant		 Chr11:97304883 Arhgap23 Intron
Cpgi3698 1442 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs225879562
MGI SNP Detail
Alliance Variant		 Chr11:97305069 Arhgap23 Intron
Cpgi3698 1256 bp proximal
Gm57393 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27011487
MGI SNP Detail
Alliance Variant		 Chr11:97305115 Arhgap23 Intron
Cpgi3698 1210 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C T C
rs212288820
MGI SNP Detail
Alliance Variant		 Chr11:97305227 Arhgap23 Intron
Cpgi3698 1098 bp proximal
Gm57393 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27011486
MGI SNP Detail
Alliance Variant		 Chr11:97305273 Arhgap23 Intron
Cpgi3698 1052 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C T C T T C
rs259443850
MGI SNP Detail
Alliance Variant		 Chr11:97305332 Arhgap23 Intron
Cpgi3698 993 bp proximal
Gm57393 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219635031
MGI SNP Detail
Alliance Variant		 Chr11:97305346 Arhgap23 Intron
Cpgi3698 979 bp proximal
Gm57393 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs240414807
MGI SNP Detail
Alliance Variant		 Chr11:97305394 Arhgap23 Intron
Cpgi3698 931 bp proximal
Gm57393 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C A C A C C C C C C C A C A C C
rs27011485
MGI SNP Detail
Alliance Variant		 Chr11:97305409 Arhgap23 Intron
Cpgi3698 916 bp proximal
Gm57393 within coordinates of
 SNP C/G G G G G G G C G G G G C G
rs27011484
MGI SNP Detail
Alliance Variant		 Chr11:97305434 Arhgap23 Intron
Cpgi3698 891 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C T C C C T C T T C
rs27011483
MGI SNP Detail
Alliance Variant		 Chr11:97305493 Arhgap23 Intron
Cpgi3698 832 bp proximal
Gm57393 within coordinates of
 SNP A/G G G G G G G A G G G A G A A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250179484
MGI SNP Detail
Alliance Variant		 Chr11:97305547 Arhgap23 Intron
Cpgi3698 778 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C T C C C C C C C C C C C C C C C C C C
rs217734393
MGI SNP Detail
Alliance Variant		 Chr11:97305567 Arhgap23 Intron
Cpgi3698 758 bp proximal
Gm57393 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A A A G G G A G A G G G G G G G A G A A A
rs241954483
MGI SNP Detail
Alliance Variant		 Chr11:97305575 Arhgap23 Intron
Cpgi3698 750 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263680230
MGI SNP Detail
Alliance Variant		 Chr11:97305622 Arhgap23 Intron
Cpgi3698 703 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226591918
MGI SNP Detail
Alliance Variant		 Chr11:97305670 Arhgap23 Intron
Cpgi3698 655 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C T C T C C C C C C C C C T C C
rs247747397
MGI SNP Detail
Alliance Variant		 Chr11:97305693 Arhgap23 Intron
Cpgi3698 632 bp proximal
Gm57393 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G A G A G G G G G G G A G A G G
rs259937598
MGI SNP Detail
Alliance Variant		 Chr11:97305875 Arhgap23 Intron
Cpgi3698 450 bp proximal
Gm57393 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A T T T A A A T A T A A A A A A A T A T T T
rs225838068
MGI SNP Detail
Alliance Variant		 Chr11:97305944 Arhgap23 Intron
Cpgi3698 381 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C T C T C C C C C C C T C T C C
rs239740717
MGI SNP Detail
Alliance Variant		 Chr11:97305945 Arhgap23 Intron
Cpgi3698 380 bp proximal
Gm57393 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C A C A C C C C C C C A C A C C
rs256109144
MGI SNP Detail
Alliance Variant		 Chr11:97306000 Arhgap23 Intron
Cpgi3698 325 bp proximal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C T C T C C C C C C C T C T C C
rs27011482
MGI SNP Detail
Alliance Variant		 Chr11:97306001 Arhgap23 Intron
Cpgi3698 324 bp proximal
Gm57393 within coordinates of
 SNP A/G A A A A A A A A A G G A
rs254122349
MGI SNP Detail
Alliance Variant		 Chr11:97306091 Arhgap23 Intron
Cpgi3698 234 bp proximal
Gm57393 within coordinates of
Rr402912 within coordinates of
Rr455766 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584272737
MGI SNP Detail
Alliance Variant		 Chr11:97306226 Arhgap23 Intron
Cpgi3698 99 bp proximal
Gm57393 within coordinates of
Rr402912 within coordinates of
Rr455766 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs246315285
MGI SNP Detail
Alliance Variant		 Chr11:97306327 Arhgap23 Intron
Cpgi3698 within coordinates of
Gm57393 within coordinates of
Rr402912 within coordinates of
Rr455766 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213957456
MGI SNP Detail
Alliance Variant		 Chr11:97306408 Arhgap23 Intron
Arhgap23 mRNA-UTR
Cpgi3698 within coordinates of
Gm57393 within coordinates of
Rr455766 within coordinates of
Tssr104625 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G
rs232481161
MGI SNP Detail
Alliance Variant		 Chr11:97306410 Arhgap23 Intron
Arhgap23 mRNA-UTR
Cpgi3698 within coordinates of
Gm57393 within coordinates of
Rr455766 within coordinates of
Tssr104625 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244244441
MGI SNP Detail
Alliance Variant		 Chr11:97306469 Arhgap23 Coding-Synonymous
Arhgap23 Intron
Cpgi3698 within coordinates of
Gm57393 within coordinates of
Rr455766 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211768717
MGI SNP Detail
Alliance Variant		 Chr11:97306648 Arhgap23 Intron
Cpgi3698 within coordinates of
Gm57393 within coordinates of
Rr455766 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236945511
MGI SNP Detail
Alliance Variant		 Chr11:97306800 Arhgap23 Intron
Cpgi3698 within coordinates of
Gm57393 within coordinates of
Rr455766 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260070677
MGI SNP Detail
Alliance Variant		 Chr11:97306973 Arhgap23 Intron
Cpgi3698 within coordinates of
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226981191
MGI SNP Detail
Alliance Variant		 Chr11:97307069 Arhgap23 Intron
Cpgi3698 within coordinates of
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs237797842
MGI SNP Detail
Alliance Variant		 Chr11:97307070 Arhgap23 Intron
Cpgi3698 within coordinates of
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs253497010
MGI SNP Detail
Alliance Variant		 Chr11:97307084 Arhgap23 Intron
Cpgi3698 within coordinates of
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C T C T C C C C C C C C C T C C
rs219508014
MGI SNP Detail
Alliance Variant		 Chr11:97307121 Arhgap23 Intron
Cpgi3698 13 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C T C T C C C C C C C C C T C C
rs239703257
MGI SNP Detail
Alliance Variant		 Chr11:97307169 Arhgap23 Intron
Cpgi3698 61 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
Rr455768 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T C T C T T T T T T T C T C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256074503
MGI SNP Detail
Alliance Variant		 Chr11:97307232 Arhgap23 Intron
Cpgi3698 124 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A T A T A A A A A A A T A T A A
rs221708437
MGI SNP Detail
Alliance Variant		 Chr11:97307248 Arhgap23 Intron
Cpgi3698 140 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs250367159
MGI SNP Detail
Alliance Variant		 Chr11:97307322 Arhgap23 Intron
Cpgi3698 214 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264532963
MGI SNP Detail
Alliance Variant		 Chr11:97307357 Arhgap23 Intron
Cpgi3698 249 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232354464
MGI SNP Detail
Alliance Variant		 Chr11:97307411 Arhgap23 Intron
Cpgi3698 303 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G T G T G G G G G G G G G T G G
rs246195700
MGI SNP Detail
Alliance Variant		 Chr11:97307660 Arhgap23 Intron
Cpgi3698 552 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP A/G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27011481
MGI SNP Detail
Alliance Variant		 Chr11:97307684 Arhgap23 Intron
Cpgi3698 576 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP A/G A A A A A A A A G A G G
rs226421656
MGI SNP Detail
Alliance Variant		 Chr11:97307738 Arhgap23 Intron
Cpgi3698 630 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242692956
MGI SNP Detail
Alliance Variant		 Chr11:97307749 Arhgap23 Intron
Cpgi3698 641 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586840959
MGI SNP Detail
Alliance Variant		 Chr11:97307796 Arhgap23 Intron
Cpgi3698 688 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211737282
MGI SNP Detail
Alliance Variant		 Chr11:97307834 Arhgap23 Intron
Cpgi3698 726 bp distal
Gm57393 within coordinates of
Rr455767 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G G
rs235203772
MGI SNP Detail
Alliance Variant		 Chr11:97307865 Arhgap23 Intron
Cpgi3698 757 bp distal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258950347
MGI SNP Detail
Alliance Variant		 Chr11:97307907 Arhgap23 Intron
Cpgi3698 799 bp distal
Gm57393 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T C T C T T T T T T T C T C C C
rs580759239
MGI SNP Detail
Alliance Variant		 Chr11:97307969 Arhgap23 Intron
Cpgi3698 861 bp distal
Gm57393 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G A G A G G G G G G G G G A G G
rs218800378
MGI SNP Detail
Alliance Variant		 Chr11:97308021 Arhgap23 Intron
Cpgi3698 913 bp distal
Gm57393 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233620642
MGI SNP Detail
Alliance Variant		 Chr11:97308022 Arhgap23 Intron
Cpgi3698 914 bp distal
Gm57393 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253462287
MGI SNP Detail
Alliance Variant		 Chr11:97308034 Arhgap23 Intron
Cpgi3698 926 bp distal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584233492
MGI SNP Detail
Alliance Variant		 Chr11:97308053 Arhgap23 Intron
Cpgi3698 945 bp distal
Gm57393 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs579308257
MGI SNP Detail
Alliance Variant		 Chr11:97308069 Arhgap23 Intron
Cpgi3698 961 bp distal
Gm57393 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C G C G C C C C C C C C C G C C
rs27011480
MGI SNP Detail
Alliance Variant		 Chr11:97308087 Arhgap23 Intron
Cpgi3698 979 bp distal
Gm57393 within coordinates of
 SNP C/T T T T T T T T T T T T T T T C
rs6341395
MGI SNP Detail
Alliance Variant		 Chr11:97308175 Arhgap23 Intron
Cpgi3698 1067 bp distal
Gm57393 within coordinates of
 SNP C/T T C
rs6342962
MGI SNP Detail
Alliance Variant		 Chr11:97308455 Arhgap23 Intron
Cpgi3698 1347 bp distal
Gm57393 within coordinates of
 SNP A/G A A A A A A A G A A A G A G G A
rs6343006
MGI SNP Detail
Alliance Variant		 Chr11:97308481 Arhgap23 Intron
Cpgi3698 1373 bp distal
Gm57393 within coordinates of
 SNP C/G C C C C C C C C G C C C G C G G C
rs247477957
MGI SNP Detail
Alliance Variant		 Chr11:97308731 Arhgap23 Intron
Cpgi3698 1623 bp distal
Gm57393 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs266163066
MGI SNP Detail
Alliance Variant		 Chr11:97308744 Arhgap23 Intron
Cpgi3698 1636 bp distal
Gm57393 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47224489
MGI SNP Detail
Alliance Variant		 Chr11:97308769 Arhgap23 Intron
Cpgi3698 1661 bp distal
Gm57393 within coordinates of
 SNP C C
rs224347208
MGI SNP Detail
Alliance Variant		 Chr11:97308836 Arhgap23 Intron
Cpgi3698 1728 bp distal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584886180
MGI SNP Detail
Alliance Variant		 Chr11:97308839 Arhgap23 Intron
Cpgi3698 1731 bp distal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs578931389
MGI SNP Detail
Alliance Variant		 Chr11:97308855 Arhgap23 Intron
Cpgi3698 1747 bp distal
Gm57393 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs240231762
MGI SNP Detail
Alliance Variant		 Chr11:97308878 Arhgap23 Intron
Cpgi3698 1770 bp distal
Gm57393 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27011479
MGI SNP Detail
Alliance Variant		 Chr11:97308965 Arhgap23 Intron
Cpgi3698 1857 bp distal
Gm57393 within coordinates of
 SNP A/G A A A A A A A A A A G A G G A
rs226389645
MGI SNP Detail
Alliance Variant		 Chr11:97308988 Arhgap23 Intron
Cpgi3698 1880 bp distal
Gm57393 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236246450
MGI SNP Detail
Alliance Variant		 Chr11:97309011 Arhgap23 Intron
Cpgi3698 1903 bp distal
Gm57393 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27011478
MGI SNP Detail
Alliance Variant		 Chr11:97309052 Arhgap23 Intron
Cpgi3698 1944 bp distal
Gm57393 within coordinates of
 SNP A/C C C C C C C A C C C C C C C C
rs234479764
MGI SNP Detail
Alliance Variant		 Chr11:97309090 Arhgap23 Intron
Cpgi3698 1982 bp distal
Gm57393 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A G G A
rs582284631
MGI SNP Detail
Alliance Variant		 Chr11:97309093 Arhgap23 Intron
Cpgi3698 1985 bp distal
Gm57393 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 86 of 86
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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