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Mouse SNP Summary
Symbol
Name
ID 		Cpgi4468
CpG island 4468
MGI:5669570

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583797951
MGI SNP Detail		 Chr12:20360101 Cpgi4468 1972 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A
rs108836093
MGI SNP Detail		 Chr12:20360286 Cpgi4468 1787 bp proximal
 SNP C C
rs108102924
MGI SNP Detail		 Chr12:20360734 Cpgi4468 1339 bp proximal
 SNP A A
rs580178828
MGI SNP Detail		 Chr12:20360856 Cpgi4468 1217 bp proximal
 SNP A/C A C C C C C C C C C C C C C C C C C A C
rs108507715
MGI SNP Detail		 Chr12:20360879 Cpgi4468 1194 bp proximal
 SNP G G
rs107898830
MGI SNP Detail		 Chr12:20360890 Cpgi4468 1183 bp proximal
 SNP T T T T
rs108868282
MGI SNP Detail		 Chr12:20360913 Cpgi4468 1160 bp proximal
 SNP T T T
rs108499018
MGI SNP Detail		 Chr12:20360937 Cpgi4468 1136 bp proximal
 SNP C C C
rs108412076
MGI SNP Detail		 Chr12:20360957 Cpgi4468 1116 bp proximal
 SNP G/T G G T
rs107714896
MGI SNP Detail		 Chr12:20360973 Cpgi4468 1100 bp proximal
 SNP C/T T C
rs108528313
MGI SNP Detail		 Chr12:20361006 Cpgi4468 1067 bp proximal
 SNP C C C
rs583831306
MGI SNP Detail		 Chr12:20361048 Cpgi4468 1025 bp proximal
 SNP A/G A G G G G G G G G G G G G G G A
rs587454488
MGI SNP Detail		 Chr12:20361051 Cpgi4468 1022 bp proximal
 SNP A/G A G A A A A A A A A A A A A A A A A A A A A A G A
rs580764592
MGI SNP Detail		 Chr12:20361077 Cpgi4468 996 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584118658
MGI SNP Detail		 Chr12:20361249 Cpgi4468 824 bp proximal
 SNP C/T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T
rs108478231
MGI SNP Detail		 Chr12:20361543 Cpgi4468 530 bp proximal
 SNP A/G G A
rs107934678
MGI SNP Detail		 Chr12:20361570 Cpgi4468 503 bp proximal
 SNP T T T
rs587079170
MGI SNP Detail		 Chr12:20361691 Cpgi4468 382 bp proximal
 SNP C/G C G C C C C C C C C C G C C C C G G C
rs580984175
MGI SNP Detail		 Chr12:20361753 Cpgi4468 320 bp proximal
 SNP G/T G T T T T T T T T T T G G
rs585005642
MGI SNP Detail		 Chr12:20361782 Cpgi4468 291 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs108705243
MGI SNP Detail		 Chr12:20361960 Cpgi4468 113 bp proximal
 SNP A/C C A
rs582433893
MGI SNP Detail		 Chr12:20362015 Cpgi4468 58 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585007156
MGI SNP Detail		 Chr12:20362019 Cpgi4468 54 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579273168
MGI SNP Detail		 Chr12:20362020 Cpgi4468 53 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C C T T T
rs581806611
MGI SNP Detail		 Chr12:20362042 Cpgi4468 31 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585418833
MGI SNP Detail		 Chr12:20362044 Cpgi4468 29 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578740139
MGI SNP Detail		 Chr12:20362047 Cpgi4468 26 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs108308868
MGI SNP Detail		 Chr12:20362055 Cpgi4468 18 bp proximal
 SNP A A A
rs108583240
MGI SNP Detail		 Chr12:20362079 Cpgi4468 within coordinates of
 SNP T T
rs585723570
MGI SNP Detail		 Chr12:20362087 Cpgi4468 within coordinates of
Rr463625 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs108595736
MGI SNP Detail		 Chr12:20362172 Cpgi4468 within coordinates of
Rr463625 within coordinates of
 SNP C/T T C
rs108538690
MGI SNP Detail		 Chr12:20362195 Cpgi4468 within coordinates of
Rr463625 within coordinates of
 SNP C/T T C
rs108242694
MGI SNP Detail		 Chr12:20362202 Cpgi4468 within coordinates of
Rr463625 within coordinates of
 SNP G/T T G
rs52115896
MGI SNP Detail		 Chr12:20362233 Cpgi4468 within coordinates of
Gm61293 within coordinates of
Rr463625 within coordinates of
Tssr112921 within coordinates of
 SNP A/T A A A A A A A A A A A T A T A T A
rs52510028
MGI SNP Detail		 Chr12:20362249 Cpgi4468 within coordinates of
Gm61293 within coordinates of
Rr463625 within coordinates of
Tssr112921 within coordinates of
 SNP G/T G G G T G G ? G T G T G G
rs257179425
MGI SNP Detail		 Chr12:20362268 Cpgi4468 within coordinates of
Gm61293 within coordinates of
Rr463625 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C
rs108369330
MGI SNP Detail		 Chr12:20362275 Cpgi4468 within coordinates of
Gm61293 within coordinates of
Rr463625 within coordinates of
 SNP C/G C G
rs241172829
MGI SNP Detail		 Chr12:20362277 Cpgi4468 within coordinates of
Gm61293 within coordinates of
Rr463625 within coordinates of
 SNP G/T T G G G G G G G G T G G G G G G T G
rs108630552
MGI SNP Detail		 Chr12:20362281 Cpgi4468 within coordinates of
Gm61293 within coordinates of
Rr463625 within coordinates of
 SNP G/T T G
rs583635686
MGI SNP Detail		 Chr12:20362283 Cpgi4468 within coordinates of
Gm61293 within coordinates of
Rr463625 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G
rs585993585
MGI SNP Detail		 Chr12:20362342 Cpgi4468 within coordinates of
Gm61293 within coordinates of
Rr463625 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs107897742
MGI SNP Detail		 Chr12:20362407 Cpgi4468 within coordinates of
Gm61293 within coordinates of
 SNP T T
rs46763589
MGI SNP Detail		 Chr12:20362442 Cpgi4468 within coordinates of
Gm61293 within coordinates of
 SNP G/T G G G G G T G T
rs580297624
MGI SNP Detail		 Chr12:20362479 Cpgi4468 within coordinates of
Gm61293 within coordinates of
 SNP C/G G C C C C C C C C G C C C C C G G C
rs582985483
MGI SNP Detail		 Chr12:20362552 Cpgi4468 within coordinates of
Gm49697 within coordinates of
Gm61293 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G
rs586664966
MGI SNP Detail		 Chr12:20363003 Cpgi4468 254 bp distal
Gm61293 within coordinates of
 SNP A/C A A C A A A A A A A A A A A A C A A A A A A A A C C A A
rs242688693
MGI SNP Detail		 Chr12:20363041 Cpgi4468 292 bp distal
Gm61293 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580727318
MGI SNP Detail		 Chr12:20363086 Cpgi4468 337 bp distal
Gm61293 within coordinates of
 SNP A/C A C C C C C C C C C C C C A C C C C C C C C C A C A C C C
rs583547743
MGI SNP Detail		 Chr12:20363101 Cpgi4468 352 bp distal
Gm61293 within coordinates of
 SNP A/G G A A A A A A A A A A A G A A A A A A A A G G A A
rs587054901
MGI SNP Detail		 Chr12:20363317 Cpgi4468 568 bp distal
Gm61293 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs581341976
MGI SNP Detail		 Chr12:20363455 Cpgi4468 706 bp distal
Gm61293 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G
rs107826657
MGI SNP Detail		 Chr12:20363479 Cpgi4468 730 bp distal
Gm61293 within coordinates of
 SNP C C
rs584713014
MGI SNP Detail		 Chr12:20363693 Cpgi4468 944 bp distal
Gm61293 within coordinates of
 SNP G G G G G G G G G G G G G G G
rs579313294
MGI SNP Detail		 Chr12:20363795 Cpgi4468 1046 bp distal
Gm61293 within coordinates of
 SNP C/G C G C C C C C C C C C G C C C C C C C C G C C
rs581496248
MGI SNP Detail		 Chr12:20363804 Cpgi4468 1055 bp distal
Gm61293 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585162872
MGI SNP Detail		 Chr12:20363805 Cpgi4468 1056 bp distal
Gm61293 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578480353
MGI SNP Detail		 Chr12:20364544 Cpgi4468 1795 bp distal
Gm61293 within coordinates of
 SNP A/T A T A A A A A A A A A A A A A A A T A
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Showing SNP(s) 1 - 57 of 57
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory