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Mouse SNP Summary
Symbol
Name
ID 		Cpgi5027
CpG island 5027
MGI:5670129

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235792541
MGI SNP Detail		 Chr12:104438632 Cpgi5026 within coordinates of
Cpgi5027 1968 bp proximal
Gsc within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254512609
MGI SNP Detail		 Chr12:104438722 Cpgi5026 within coordinates of
Cpgi5027 1878 bp proximal
Gsc within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230030150
MGI SNP Detail		 Chr12:104438731 Cpgi5026 within coordinates of
Cpgi5027 1869 bp proximal
Gsc within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251307000
MGI SNP Detail		 Chr12:104438734 Cpgi5026 within coordinates of
Cpgi5027 1866 bp proximal
Gsc within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265453541
MGI SNP Detail		 Chr12:104438784 Cpgi5026 within coordinates of
Cpgi5027 1816 bp proximal
Gsc within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs232156375
MGI SNP Detail		 Chr12:104438932 Cpgi5026 within coordinates of
Cpgi5027 1668 bp proximal
Gsc within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247740750
MGI SNP Detail		 Chr12:104438972 Cpgi5026 within coordinates of
Cpgi5027 1628 bp proximal
Gsc within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217091128
MGI SNP Detail		 Chr12:104439001 Cpgi5026 within coordinates of
Cpgi5027 1599 bp proximal
Gsc within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C C
rs236777300
MGI SNP Detail		 Chr12:104439138 Cpgi5026 within coordinates of
Cpgi5027 1462 bp proximal
Gsc within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243851062
MGI SNP Detail		 Chr12:104439201 Cpgi5026 within coordinates of
Cpgi5027 1399 bp proximal
Gsc within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G G
rs213124682
MGI SNP Detail		 Chr12:104439261 Cpgi5026 within coordinates of
Cpgi5027 1339 bp proximal
Gsc within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238484586
MGI SNP Detail		 Chr12:104439288 Cpgi5026 within coordinates of
Cpgi5027 1312 bp proximal
Gsc within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258106426
MGI SNP Detail		 Chr12:104439558 Cpgi5026 within coordinates of
Cpgi5027 1042 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A
rs224477352
MGI SNP Detail		 Chr12:104439572 Cpgi5026 within coordinates of
Cpgi5027 1028 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C C
rs387866811
MGI SNP Detail		 Chr12:104439759 Cpgi5026 within coordinates of
Cpgi5027 841 bp proximal
Gscdt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G
rs233719332
MGI SNP Detail		 Chr12:104440076 Cpgi5027 524 bp proximal
Gscdt within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs252684983
MGI SNP Detail		 Chr12:104440287 Cpgi5027 313 bp proximal
Gscdt within coordinates of
Rr387727 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs222718570
MGI SNP Detail		 Chr12:104440288 Cpgi5027 312 bp proximal
Gscdt within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235852088
MGI SNP Detail		 Chr12:104440317 Cpgi5027 283 bp proximal
Gscdt within coordinates of
Rr387727 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs264846982
MGI SNP Detail		 Chr12:104440332 Cpgi5027 268 bp proximal
Gscdt within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs222535094
MGI SNP Detail		 Chr12:104440385 Cpgi5027 215 bp proximal
Gscdt within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs387166585
MGI SNP Detail		 Chr12:104440561 Cpgi5027 39 bp proximal
Gscdt within coordinates of
Rr387727 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T A A T T T T T T T
rs246770059
MGI SNP Detail		 Chr12:104440592 Cpgi5027 8 bp proximal
Gscdt within coordinates of
Rr387727 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263114214
MGI SNP Detail		 Chr12:104440689 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs232866687
MGI SNP Detail		 Chr12:104440766 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr387727 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247748978
MGI SNP Detail		 Chr12:104440782 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs387663817
MGI SNP Detail		 Chr12:104440884 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T C C C C C C C C C C C C C C T T C C C C C C C
rs261017559
MGI SNP Detail		 Chr12:104440889 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs223882616
MGI SNP Detail		 Chr12:104440924 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs243960542
MGI SNP Detail		 Chr12:104440944 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213734733
MGI SNP Detail		 Chr12:104440977 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs236556802
MGI SNP Detail		 Chr12:104441005 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256650236
MGI SNP Detail		 Chr12:104441063 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs215995251
MGI SNP Detail		 Chr12:104441139 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs233729575
MGI SNP Detail		 Chr12:104441172 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252730498
MGI SNP Detail		 Chr12:104441184 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A G A G G G A A A G A A A A A A G A A A G G A A G A A G G
rs583556608
MGI SNP Detail		 Chr12:104441199 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T T T T T T T T T T T T T T T T T T T T T T T
rs222788737
MGI SNP Detail		 Chr12:104441207 Cpgi5027 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs230097309
MGI SNP Detail		 Chr12:104441227 Cpgi5027 13 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256332515
MGI SNP Detail		 Chr12:104441305 Cpgi5027 91 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs222145911
MGI SNP Detail		 Chr12:104441358 Cpgi5027 144 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs244086442
MGI SNP Detail		 Chr12:104441359 Cpgi5027 145 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265472961
MGI SNP Detail		 Chr12:104441380 Cpgi5027 166 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs221640731
MGI SNP Detail		 Chr12:104441420 Cpgi5027 206 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs241805107
MGI SNP Detail		 Chr12:104441458 Cpgi5027 244 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A C C A A C A C A C A A A C A A A A A A C A A A C C A A C A A C A
rs261120818
MGI SNP Detail		 Chr12:104441468 Cpgi5027 254 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G/T G G G G G G G G G G G G G G G G G G G A G G T G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223990677
MGI SNP Detail		 Chr12:104441482 Cpgi5027 268 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237785114
MGI SNP Detail		 Chr12:104441525 Cpgi5027 311 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs262198422
MGI SNP Detail		 Chr12:104441589 Cpgi5027 375 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230678351
MGI SNP Detail		 Chr12:104441641 Cpgi5027 427 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251822388
MGI SNP Detail		 Chr12:104441645 Cpgi5027 431 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216537685
MGI SNP Detail		 Chr12:104441696 Cpgi5027 482 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227791143
MGI SNP Detail		 Chr12:104441702 Cpgi5027 488 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs246937041
MGI SNP Detail		 Chr12:104441757 Cpgi5027 543 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217458254
MGI SNP Detail		 Chr12:104441810 Cpgi5027 596 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230148434
MGI SNP Detail		 Chr12:104441818 Cpgi5027 604 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261630189
MGI SNP Detail		 Chr12:104441912 Cpgi5027 698 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213808556
MGI SNP Detail		 Chr12:104441946 Cpgi5027 732 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238979647
MGI SNP Detail		 Chr12:104442020 Cpgi5027 806 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs258593894
MGI SNP Detail		 Chr12:104442118 Cpgi5027 904 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs221790276
MGI SNP Detail		 Chr12:104442121 Cpgi5027 907 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241907885
MGI SNP Detail		 Chr12:104442168 Cpgi5027 954 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255141047
MGI SNP Detail		 Chr12:104442225 Cpgi5027 1011 bp distal
Cpgi5028 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs217985591
MGI SNP Detail		 Chr12:104442340 Cpgi5027 1126 bp distal
Cpgi5028 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241875538
MGI SNP Detail		 Chr12:104442379 Cpgi5027 1165 bp distal
Cpgi5028 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264985395
MGI SNP Detail		 Chr12:104442394 Cpgi5027 1180 bp distal
Cpgi5028 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230598904
MGI SNP Detail		 Chr12:104442400 Cpgi5027 1186 bp distal
Cpgi5028 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247320022
MGI SNP Detail		 Chr12:104442429 Cpgi5027 1215 bp distal
Cpgi5028 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs257684611
MGI SNP Detail		 Chr12:104442532 Cpgi5027 1318 bp distal
Cpgi5028 within coordinates of
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G/T G G G G G G G G G G G G G G G G G G G T G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs227885541
MGI SNP Detail		 Chr12:104442703 Cpgi5027 1489 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246998837
MGI SNP Detail		 Chr12:104442715 Cpgi5027 1501 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs217502799
MGI SNP Detail		 Chr12:104442742 Cpgi5027 1528 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
Rr387727 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs223649395
MGI SNP Detail		 Chr12:104442841 Cpgi5027 1627 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250022285
MGI SNP Detail		 Chr12:104442888 Cpgi5027 1674 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A A A A A A A A
rs586726130
MGI SNP Detail		 Chr12:104442911 Cpgi5027 1697 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214315949
MGI SNP Detail		 Chr12:104442912 Cpgi5027 1698 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T G T T T G T T T T T T T T T T T T T T T G T T G
rs237107196
MGI SNP Detail		 Chr12:104442923 Cpgi5027 1709 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262929884
MGI SNP Detail		 Chr12:104443019 Cpgi5027 1805 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs215931368
MGI SNP Detail		 Chr12:104443042 Cpgi5027 1828 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235503025
MGI SNP Detail		 Chr12:104443169 Cpgi5027 1955 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255152921
MGI SNP Detail		 Chr12:104443178 Cpgi5027 1964 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs217994443
MGI SNP Detail		 Chr12:104443192 Cpgi5027 1978 bp distal
Gscdt within coordinates of
Rr2050 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 82 of 82
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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