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Mouse SNP Summary
Symbol
Name
ID 		Cpgi8562
CpG island 8562
MGI:5673654

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583529050
MGI SNP Detail		 Chr17:5897925 Cpgi8562 1935 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587173113
MGI SNP Detail		 Chr17:5898002 Cpgi8562 1858 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581326715
MGI SNP Detail		 Chr17:5898010 Cpgi8562 1850 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585108544
MGI SNP Detail		 Chr17:5898032 Cpgi8562 1828 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579383218
MGI SNP Detail		 Chr17:5898137 Cpgi8562 1723 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581714516
MGI SNP Detail		 Chr17:5898274 Cpgi8562 1586 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs584218365
MGI SNP Detail		 Chr17:5898310 Cpgi8562 1550 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs578442583
MGI SNP Detail		 Chr17:5898333 Cpgi8562 1527 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582195349
MGI SNP Detail		 Chr17:5898349 Cpgi8562 1511 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs585491498
MGI SNP Detail		 Chr17:5898403 Cpgi8562 1457 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs578971329
MGI SNP Detail		 Chr17:5898405 Cpgi8562 1455 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs582485367
MGI SNP Detail		 Chr17:5898442 Cpgi8562 1418 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586052188
MGI SNP Detail		 Chr17:5898463 Cpgi8562 1397 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580269291
MGI SNP Detail		 Chr17:5898500 Cpgi8562 1360 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584108479
MGI SNP Detail		 Chr17:5898503 Cpgi8562 1357 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs585477389
MGI SNP Detail		 Chr17:5898526 Cpgi8562 1334 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs579647403
MGI SNP Detail		 Chr17:5898551 Cpgi8562 1309 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583418524
MGI SNP Detail		 Chr17:5898553 Cpgi8562 1307 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586661510
MGI SNP Detail		 Chr17:5898566 Cpgi8562 1294 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581294328
MGI SNP Detail		 Chr17:5898583 Cpgi8562 1277 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583346476
MGI SNP Detail		 Chr17:5898589 Cpgi8562 1271 bp proximal
Gm35474 within coordinates of
Snx9 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587262050
MGI SNP Detail		 Chr17:5898646 Cpgi8562 1214 bp proximal
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C
rs581609691
MGI SNP Detail		 Chr17:5898655 Cpgi8562 1205 bp proximal
Snx9 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585275596
MGI SNP Detail		 Chr17:5898661 Cpgi8562 1199 bp proximal
Snx9 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs578337846
MGI SNP Detail		 Chr17:5898829 Cpgi8562 1031 bp proximal
Snx9 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580914756
MGI SNP Detail		 Chr17:5898830 Cpgi8562 1030 bp proximal
Snx9 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584506931
MGI SNP Detail		 Chr17:5898922 Cpgi8562 938 bp proximal
Snx9 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T A T T T T T T T A T T T T
rs578566462
MGI SNP Detail		 Chr17:5898934 Cpgi8562 926 bp proximal
Snx9 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582231649
MGI SNP Detail		 Chr17:5898943 Cpgi8562 917 bp proximal
Snx9 within coordinates of
 SNP A/T A A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A A
rs585610392
MGI SNP Detail		 Chr17:5898987 Cpgi8562 873 bp proximal
Snx9 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579072417
MGI SNP Detail		 Chr17:5899036 Cpgi8562 824 bp proximal
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582792513
MGI SNP Detail		 Chr17:5899046 Cpgi8562 814 bp proximal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs586564750
MGI SNP Detail		 Chr17:5899048 Cpgi8562 812 bp proximal
Snx9 within coordinates of
 SNP A/G/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T G T T T T
rs579563833
MGI SNP Detail		 Chr17:5899082 Cpgi8562 778 bp proximal
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs582093444
MGI SNP Detail		 Chr17:5899085 Cpgi8562 775 bp proximal
Snx9 within coordinates of
 SNP A/C C C C A A A A A A A A A A A A A A A A C A A C A A C A C A C A A A C A A A A A A C A A A A A A A C A A C C
rs585448131
MGI SNP Detail		 Chr17:5899106 Cpgi8562 754 bp proximal
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579685053
MGI SNP Detail		 Chr17:5899144 Cpgi8562 716 bp proximal
Snx9 within coordinates of
 SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G C G G G G G G G A G G G G
rs583421300
MGI SNP Detail		 Chr17:5899148 Cpgi8562 712 bp proximal
Snx9 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs586738468
MGI SNP Detail		 Chr17:5899149 Cpgi8562 711 bp proximal
Snx9 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs580301623
MGI SNP Detail		 Chr17:5899216 Cpgi8562 644 bp proximal
Snx9 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs583978311
MGI SNP Detail		 Chr17:5899232 Cpgi8562 628 bp proximal
Snx9 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs587512904
MGI SNP Detail		 Chr17:5899300 Cpgi8562 560 bp proximal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581719104
MGI SNP Detail		 Chr17:5899327 Cpgi8562 533 bp proximal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583937588
MGI SNP Detail		 Chr17:5899335 Cpgi8562 525 bp proximal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586695567
MGI SNP Detail		 Chr17:5899353 Cpgi8562 507 bp proximal
Snx9 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs580869673
MGI SNP Detail		 Chr17:5899368 Cpgi8562 492 bp proximal
Snx9 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs584627172
MGI SNP Detail		 Chr17:5899402 Cpgi8562 458 bp proximal
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578968625
MGI SNP Detail		 Chr17:5899476 Cpgi8562 384 bp proximal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs582683746
MGI SNP Detail		 Chr17:5899528 Cpgi8562 332 bp proximal
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585248363
MGI SNP Detail		 Chr17:5899543 Cpgi8562 317 bp proximal
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579163503
MGI SNP Detail		 Chr17:5899606 Cpgi8562 254 bp proximal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582807986
MGI SNP Detail		 Chr17:5899630 Cpgi8562 230 bp proximal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs585055439
MGI SNP Detail		 Chr17:5899680 Cpgi8562 180 bp proximal
Snx9 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579630296
MGI SNP Detail		 Chr17:5899688 Cpgi8562 172 bp proximal
Snx9 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs581999786
MGI SNP Detail		 Chr17:5899722 Cpgi8562 138 bp proximal
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585883917
MGI SNP Detail		 Chr17:5899773 Cpgi8562 87 bp proximal
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580192951
MGI SNP Detail		 Chr17:5899780 Cpgi8562 80 bp proximal
Snx9 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583868497
MGI SNP Detail		 Chr17:5899856 Cpgi8562 4 bp proximal
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs587248569
MGI SNP Detail		 Chr17:5899891 Cpgi8562 within coordinates of
Snx9 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs580429166
MGI SNP Detail		 Chr17:5899901 Cpgi8562 within coordinates of
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584027086
MGI SNP Detail		 Chr17:5899911 Cpgi8562 within coordinates of
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586196207
MGI SNP Detail		 Chr17:5899912 Cpgi8562 within coordinates of
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580822461
MGI SNP Detail		 Chr17:5900040 Cpgi8562 within coordinates of
Snx9 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33310171
MGI SNP Detail		 Chr17:5900115 Cpgi8562 73 bp distal
Snx9 within coordinates of
 SNP A/G A G G
rs584295406
MGI SNP Detail		 Chr17:5900139 Cpgi8562 97 bp distal
Snx9 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs587203890
MGI SNP Detail		 Chr17:5900152 Cpgi8562 110 bp distal
Snx9 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs581063719
MGI SNP Detail		 Chr17:5900161 Cpgi8562 119 bp distal
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584819865
MGI SNP Detail		 Chr17:5900169 Cpgi8562 127 bp distal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579052847
MGI SNP Detail		 Chr17:5900181 Cpgi8562 139 bp distal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582556290
MGI SNP Detail		 Chr17:5900183 Cpgi8562 141 bp distal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585215331
MGI SNP Detail		 Chr17:5900219 Cpgi8562 177 bp distal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs578356064
MGI SNP Detail		 Chr17:5900478 Cpgi8562 436 bp distal
Snx9 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs582011507
MGI SNP Detail		 Chr17:5900496 Cpgi8562 454 bp distal
Snx9 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585777026
MGI SNP Detail		 Chr17:5900545 Cpgi8562 503 bp distal
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578569149
MGI SNP Detail		 Chr17:5900575 Cpgi8562 533 bp distal
Snx9 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582331280
MGI SNP Detail		 Chr17:5900626 Cpgi8562 584 bp distal
Snx9 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586004866
MGI SNP Detail		 Chr17:5900633 Cpgi8562 591 bp distal
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs580218658
MGI SNP Detail		 Chr17:5900722 Cpgi8562 680 bp distal
Snx9 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T A T T T T
rs583722493
MGI SNP Detail		 Chr17:5900755 Cpgi8562 713 bp distal
Snx9 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A C A A A A A A A A A A A A
rs586462574
MGI SNP Detail		 Chr17:5900772 Cpgi8562 730 bp distal
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579531060
MGI SNP Detail		 Chr17:5900929 Cpgi8562 887 bp distal
Snx9 within coordinates of
 SNP C/T T T T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T
rs583017204
MGI SNP Detail		 Chr17:5900945 Cpgi8562 903 bp distal
Snx9 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586784691
MGI SNP Detail		 Chr17:5900980 Cpgi8562 938 bp distal
Snx9 within coordinates of
 SNP A/T T T T A A A A A A A A A A A A A A A A T A A T A A T A T A T A A A T A A A A A A T A A A A A A A T A A T T
rs580953020
MGI SNP Detail		 Chr17:5900984 Cpgi8562 942 bp distal
Snx9 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs583518837
MGI SNP Detail		 Chr17:5901042 Cpgi8562 1000 bp distal
Snx9 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587276109
MGI SNP Detail		 Chr17:5901107 Cpgi8562 1065 bp distal
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs581402076
MGI SNP Detail		 Chr17:5901165 Cpgi8562 1123 bp distal
Snx9 within coordinates of
 SNP C/T C C C T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs584848784
MGI SNP Detail		 Chr17:5901245 Cpgi8562 1203 bp distal
Snx9 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G
rs579433422
MGI SNP Detail		 Chr17:5901311 Cpgi8562 1269 bp distal
Snx9 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581509051
MGI SNP Detail		 Chr17:5901353 Cpgi8562 1311 bp distal
E130303B20Rik within coordinates of
Snx9 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs584240774
MGI SNP Detail		 Chr17:5901381 Cpgi8562 1339 bp distal
E130303B20Rik within coordinates of
Snx9 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs578469294
MGI SNP Detail		 Chr17:5901481 Cpgi8562 1439 bp distal
E130303B20Rik within coordinates of
Snx9 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A
rs585898585
MGI SNP Detail		 Chr17:5901643 Cpgi8562 1601 bp distal
E130303B20Rik within coordinates of
Snx9 within coordinates of
 SNP A/C/T A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs578949577
MGI SNP Detail		 Chr17:5901688 Cpgi8562 1646 bp distal
E130303B20Rik within coordinates of
Snx9 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585709487
MGI SNP Detail		 Chr17:5901719 Cpgi8562 1677 bp distal
E130303B20Rik within coordinates of
Snx9 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A
rs580303438
MGI SNP Detail		 Chr17:5901765 Cpgi8562 1723 bp distal
E130303B20Rik within coordinates of
Snx9 within coordinates of
 SNP A/T A T T T T A T T T T T T T T T T T T T T T T T A T T T T T T T T T T T A T T T T T T T T T T T
rs584093686
MGI SNP Detail		 Chr17:5901827 Cpgi8562 1785 bp distal
E130303B20Rik within coordinates of
Snx9 within coordinates of
 SNP A/T T T T A A A A A A A A A A A A A A A A A A A A A A T A T A T A A A A A A A A A A A A A A A A A A A T T
rs33854505
MGI SNP Detail		 Chr17:5901883 Cpgi8562 1841 bp distal
E130303B20Rik within coordinates of
Snx9 within coordinates of
 SNP A/T A A T
rs585469335
MGI SNP Detail		 Chr17:5901948 Cpgi8562 1906 bp distal
E130303B20Rik within coordinates of
Snx9 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579637379
MGI SNP Detail		 Chr17:5901981 Cpgi8562 1939 bp distal
E130303B20Rik within coordinates of
Snx9 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
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Showing SNP(s) 1 - 100 of 101
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory