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Mouse SNP Summary
Symbol
Name
ID
Cpgi8786
CpG island 8786
MGI:5673876

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Showing SNP(s) 1 - 53 of 53

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252839738
MGI SNP Detail
Alliance Variant
Chr17:26053560 Cpgi8786 1949 bp proximal
Gm20683 mRNA-UTR
Rhbdl1 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221616341
MGI SNP Detail
Alliance Variant
Chr17:26053586 Cpgi8786 1923 bp proximal
Gm20683 mRNA-UTR
Rhbdl1 mRNA-UTR
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs586858832
MGI SNP Detail
Alliance Variant
Chr17:26053598 Cpgi8786 1911 bp proximal
Gm20683 mRNA-UTR
Rhbdl1 mRNA-UTR
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs108548330
MGI SNP Detail
Alliance Variant
Chr17:26053681 Cpgi8786 1828 bp proximal
Gm20683 mRNA-UTR
Rhbdl1 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262547730
MGI SNP Detail
Alliance Variant
Chr17:26053698 Cpgi8786 1811 bp proximal
Gm20683 mRNA-UTR
Rhbdl1 mRNA-UTR
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs222702361
MGI SNP Detail
Alliance Variant
Chr17:26053912 Cpgi8786 1597 bp proximal
Gm20683 mRNA-UTR
Rhbdl1 Coding-Synonymous
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108140166
MGI SNP Detail
Alliance Variant
Chr17:26054075 Cpgi8786 1434 bp proximal
Gm20683 mRNA-UTR
Rhbdl1 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs107664828
MGI SNP Detail
Alliance Variant
Chr17:26054102 Cpgi8786 1407 bp proximal
Gm20683 mRNA-UTR
Rhbdl1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223468518
MGI SNP Detail
Alliance Variant
Chr17:26054215 Cpgi8786 1294 bp proximal
Gm20683 Intron
Rhbdl1 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241964168
MGI SNP Detail
Alliance Variant
Chr17:26054363 Cpgi8786 1146 bp proximal
Gm20683 Intron
Rhbdl1 Intron
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs51046835
MGI SNP Detail
Alliance Variant
Chr17:26054568 Cpgi8786 941 bp proximal
Gm20683 Intron
Rhbdl1 Intron
SNP A/G A A A A A A A G A A G G
rs231978963
MGI SNP Detail
Alliance Variant
Chr17:26054593 Cpgi8786 916 bp proximal
Gm20683 Intron
Rhbdl1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48028312
MGI SNP Detail
Alliance Variant
Chr17:26054617 Cpgi8786 892 bp proximal
Gm20683 Intron
Rhbdl1 Intron
SNP C/T C C C C C C C C T C C C C
rs49415600
MGI SNP Detail
Alliance Variant
Chr17:26054650 Cpgi8786 859 bp proximal
Gm20683 Intron
Rhbdl1 Intron
SNP G/T T T T T T T T G T T T T
rs243914951
MGI SNP Detail
Alliance Variant
Chr17:26054721 Cpgi8786 788 bp proximal
Gm20683 mRNA-UTR
Gm20683 Splice-Site
Rhbdl1 Coding-Synonymous
Rhbdl1 Splice-Site
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265014731
MGI SNP Detail
Alliance Variant
Chr17:26055710 Cpgi8786 within coordinates of
Gm20683 Intron
Rhbdl1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs387563445
MGI SNP Detail
Alliance Variant
Chr17:26056062 Cpgi8786 within coordinates of
Gm20683 Intron
Rhbdl1 mRNA-UTR
Rr523681 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G G A G G G G G
rs228403759
MGI SNP Detail
Alliance Variant
Chr17:26056249 Cpgi8786 within coordinates of
Gm20683 Intron
Rhbdl1 mRNA-UTR
Rr523681 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108111795
MGI SNP Detail
Alliance Variant
Chr17:26056370 Cpgi8786 16 bp distal
Gm20683 Intron
Rr523681 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A G A
rs217080212
MGI SNP Detail
Alliance Variant
Chr17:26056425 Cpgi8786 71 bp distal
Gm20683 Intron
Rr523681 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs229597555
MGI SNP Detail
Alliance Variant
Chr17:26056438 Cpgi8786 84 bp distal
Gm20683 Intron
Rr523681 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108836141
MGI SNP Detail
Alliance Variant
Chr17:26056540 Cpgi8786 186 bp distal
Gm20683 Intron
Rr523681 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs108263636
MGI SNP Detail
Alliance Variant
Chr17:26056634 Cpgi8786 280 bp distal
Gm20683 Intron
Rr523681 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs240328996
MGI SNP Detail
Alliance Variant
Chr17:26056649 Cpgi8786 295 bp distal
Gm20683 Intron
Rr523681 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258094631
MGI SNP Detail
Alliance Variant
Chr17:26056770 Cpgi8786 416 bp distal
Gm20683 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214432433
MGI SNP Detail
Alliance Variant
Chr17:26056821 Cpgi8786 467 bp distal
Gm20683 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235569823
MGI SNP Detail
Alliance Variant
Chr17:26057016 Cpgi8786 662 bp distal
Gm20683 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs249721342
MGI SNP Detail
Alliance Variant
Chr17:26057037 Cpgi8786 683 bp distal
Gm20683 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs107754213
MGI SNP Detail
Alliance Variant
Chr17:26057043 Cpgi8786 689 bp distal
Gm20683 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G A G G G A G G G G G G A G G G G G G A G G A G
rs107687331
MGI SNP Detail
Alliance Variant
Chr17:26057085 Cpgi8786 731 bp distal
Gm20683 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T C T T T T
rs253586399
MGI SNP Detail
Alliance Variant
Chr17:26057253 Cpgi8786 899 bp distal
Gm20683 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224158332
MGI SNP Detail
Alliance Variant
Chr17:26057276 Cpgi8786 922 bp distal
Gm20683 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs246752445
MGI SNP Detail
Alliance Variant
Chr17:26057280 Cpgi8786 926 bp distal
Gm20683 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108918168
MGI SNP Detail
Alliance Variant
Chr17:26057289 Cpgi8786 935 bp distal
Gm20683 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A G A A A A A A G A A G A
rs229005292
MGI SNP Detail
Alliance Variant
Chr17:26057318 Cpgi8786 964 bp distal
Gm20683 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235675959
MGI SNP Detail
Alliance Variant
Chr17:26057334 Cpgi8786 980 bp distal
Gm20683 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259580294
MGI SNP Detail
Alliance Variant
Chr17:26057407 Cpgi8786 1053 bp distal
Gm20683 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227998321
MGI SNP Detail
Alliance Variant
Chr17:26057471 Cpgi8786 1117 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245652585
MGI SNP Detail
Alliance Variant
Chr17:26057520 Cpgi8786 1166 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs217608051
MGI SNP Detail
Alliance Variant
Chr17:26057532 Cpgi8786 1178 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231969361
MGI SNP Detail
Alliance Variant
Chr17:26057551 Cpgi8786 1197 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256637980
MGI SNP Detail
Alliance Variant
Chr17:26057603 Cpgi8786 1249 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583553627
MGI SNP Detail
Alliance Variant
Chr17:26057674 Cpgi8786 1320 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582165299
MGI SNP Detail
Alliance Variant
Chr17:26057731 Cpgi8786 1377 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108816843
MGI SNP Detail
Alliance Variant
Chr17:26057769 Cpgi8786 1415 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A A A G A
rs230915210
MGI SNP Detail
Alliance Variant
Chr17:26057869 Cpgi8786 1515 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249784332
MGI SNP Detail
Alliance Variant
Chr17:26057879 Cpgi8786 1525 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP A/C/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A C
rs581743934
MGI SNP Detail
Alliance Variant
Chr17:26058005 Cpgi8786 1651 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217539815
MGI SNP Detail
Alliance Variant
Chr17:26058035 Cpgi8786 1681 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs107946741
MGI SNP Detail
Alliance Variant
Chr17:26058047 Cpgi8786 1693 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108793398
MGI SNP Detail
Alliance Variant
Chr17:26058174 Cpgi8786 1820 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs224199106
MGI SNP Detail
Alliance Variant
Chr17:26058184 Cpgi8786 1830 bp distal
Gm20683 Intron
Rhot2 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244072973
MGI SNP Detail
Alliance Variant
Chr17:26058288 Cpgi8786 1934 bp distal
Gm20683 mRNA-UTR
Rhot2 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 53 of 53

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory