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Mouse SNP Summary
Symbol
Name
ID 		Cpgi9348
CpG island 9348
MGI:5674437

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214244972
MGI SNP Detail		 Chr17:56488413 Cpgi9348 1945 bp proximal
Mydgf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108658107
MGI SNP Detail		 Chr17:56488463 Cpgi9348 1895 bp proximal
Mydgf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A G A G A G A G
rs586006804
MGI SNP Detail		 Chr17:56488557 Cpgi9348 1801 bp proximal
Mydgf within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs107918189
MGI SNP Detail		 Chr17:56488598 Cpgi9348 1760 bp proximal
Mydgf within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C T C C C C C T C T C T C T
rs223117570
MGI SNP Detail		 Chr17:56488642 Cpgi9348 1716 bp proximal
Mydgf within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs241710906
MGI SNP Detail		 Chr17:56488728 Cpgi9348 1630 bp proximal
Mydgf within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C G C C C C C C C C C C C
rs48678313
MGI SNP Detail		 Chr17:56488747 Cpgi9348 1611 bp proximal
Mydgf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G A G G G G
rs223932533
MGI SNP Detail		 Chr17:56488750 Cpgi9348 1608 bp proximal
Mydgf within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243940998
MGI SNP Detail		 Chr17:56488777 Cpgi9348 1581 bp proximal
Mydgf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108332405
MGI SNP Detail		 Chr17:56488797 Cpgi9348 1561 bp proximal
Mydgf within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G T G G G G
rs218638206
MGI SNP Detail		 Chr17:56488891 Cpgi9348 1467 bp proximal
Mydgf within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235792335
MGI SNP Detail		 Chr17:56488908 Cpgi9348 1450 bp proximal
Mydgf within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs259854450
MGI SNP Detail		 Chr17:56488910 Cpgi9348 1448 bp proximal
Mydgf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs229269131
MGI SNP Detail		 Chr17:56488959 Cpgi9348 1399 bp proximal
Mydgf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108763724
MGI SNP Detail		 Chr17:56489024 Cpgi9348 1334 bp proximal
Mydgf within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs263704543
MGI SNP Detail		 Chr17:56489059 Cpgi9348 1299 bp proximal
Mydgf within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs47138698
MGI SNP Detail		 Chr17:56489093 Cpgi9348 1265 bp proximal
Mydgf within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs48384686
MGI SNP Detail		 Chr17:56489095 Cpgi9348 1263 bp proximal
Mydgf within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs214575411
MGI SNP Detail		 Chr17:56489126 Cpgi9348 1232 bp proximal
Mydgf within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230995048
MGI SNP Detail		 Chr17:56489156 Cpgi9348 1202 bp proximal
Mydgf within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48578171
MGI SNP Detail		 Chr17:56489179 Cpgi9348 1179 bp proximal
Mydgf within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A T A A A A
rs217791532
MGI SNP Detail		 Chr17:56489197 Cpgi9348 1161 bp proximal
Mydgf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50313771
MGI SNP Detail		 Chr17:56489214 Cpgi9348 1144 bp proximal
Mydgf within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs263180093
MGI SNP Detail		 Chr17:56489241 Cpgi9348 1117 bp proximal
Mydgf within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223971540
MGI SNP Detail		 Chr17:56489375 Cpgi9348 983 bp proximal
Mydgf within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47468265
MGI SNP Detail		 Chr17:56489395 Cpgi9348 963 bp proximal
Mydgf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs47475084
MGI SNP Detail		 Chr17:56489409 Cpgi9348 949 bp proximal
Mydgf within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs107718596
MGI SNP Detail		 Chr17:56489425 Cpgi9348 933 bp proximal
Mydgf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G A G G G G
rs50833955
MGI SNP Detail		 Chr17:56489455 Cpgi9348 903 bp proximal
Mydgf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G A G G G G
rs259814189
MGI SNP Detail		 Chr17:56489504 Cpgi9348 854 bp proximal
Mydgf within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221954492
MGI SNP Detail		 Chr17:56489505 Cpgi9348 853 bp proximal
Mydgf within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs47511295
MGI SNP Detail		 Chr17:56489553 Cpgi9348 805 bp proximal
Mydgf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs52034197
MGI SNP Detail		 Chr17:56489571 Cpgi9348 787 bp proximal
Mydgf within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs231809342
MGI SNP Detail		 Chr17:56489600 Cpgi9348 758 bp proximal
Mydgf within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs50760238
MGI SNP Detail		 Chr17:56489601 Cpgi9348 757 bp proximal
Mydgf within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T C T T T T
rs51417026
MGI SNP Detail		 Chr17:56489689 Cpgi9348 669 bp proximal
Mydgf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs50951137
MGI SNP Detail		 Chr17:56489701 Cpgi9348 657 bp proximal
Mydgf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs45859336
MGI SNP Detail		 Chr17:56489747 Cpgi9348 611 bp proximal
Mydgf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs108127878
MGI SNP Detail		 Chr17:56489786 Cpgi9348 572 bp proximal
Mydgf within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs108873306
MGI SNP Detail		 Chr17:56489834 Cpgi9348 524 bp proximal
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235980667
MGI SNP Detail		 Chr17:56489895 Cpgi9348 463 bp proximal
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs107658708
MGI SNP Detail		 Chr17:56490085 Cpgi9348 273 bp proximal
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C A C A C A C A
rs108633969
MGI SNP Detail		 Chr17:56490096 Cpgi9348 262 bp proximal
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253104549
MGI SNP Detail		 Chr17:56490097 Cpgi9348 261 bp proximal
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221929791
MGI SNP Detail		 Chr17:56490118 Cpgi9348 240 bp proximal
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249091866
MGI SNP Detail		 Chr17:56490193 Cpgi9348 165 bp proximal
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs45656056
MGI SNP Detail		 Chr17:56490202 Cpgi9348 156 bp proximal
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs224243339
MGI SNP Detail		 Chr17:56490224 Cpgi9348 134 bp proximal
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244231123
MGI SNP Detail		 Chr17:56490270 Cpgi9348 88 bp proximal
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257684381
MGI SNP Detail		 Chr17:56490274 Cpgi9348 84 bp proximal
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48164395
MGI SNP Detail		 Chr17:56490300 Cpgi9348 58 bp proximal
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs45685279
MGI SNP Detail		 Chr17:56490318 Cpgi9348 40 bp proximal
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs261515135
MGI SNP Detail		 Chr17:56490329 Cpgi9348 29 bp proximal
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233461563
MGI SNP Detail		 Chr17:56490340 Cpgi9348 18 bp proximal
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258684818
MGI SNP Detail		 Chr17:56490393 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216191703
MGI SNP Detail		 Chr17:56490432 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6245788
MGI SNP Detail		 Chr17:56490543 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/T A T
rs6245809
MGI SNP Detail		 Chr17:56490548 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP C/T T C
rs579717179
MGI SNP Detail		 Chr17:56490576 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583825778
MGI SNP Detail		 Chr17:56490587 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250402995
MGI SNP Detail		 Chr17:56490646 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs108331400
MGI SNP Detail		 Chr17:56490668 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs108665630
MGI SNP Detail		 Chr17:56490669 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C
rs108600312
MGI SNP Detail		 Chr17:56490714 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs46157007
MGI SNP Detail		 Chr17:56490715 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C A C C C C
rs238565750
MGI SNP Detail		 Chr17:56490826 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs50152036
MGI SNP Detail		 Chr17:56490905 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Mydgf within coordinates of
Rr340027 within coordinates of
Rr405371 within coordinates of
Tssr148771 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs46086853
MGI SNP Detail		 Chr17:56490941 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Rr340027 within coordinates of
Rr405371 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G
rs50736847
MGI SNP Detail		 Chr17:56491030 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Rr340027 within coordinates of
Rr405371 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A T A A A A
rs107958944
MGI SNP Detail		 Chr17:56491047 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Rr340027 within coordinates of
Rr405371 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs108046814
MGI SNP Detail		 Chr17:56491056 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Rr340027 within coordinates of
Rr405371 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs49560754
MGI SNP Detail		 Chr17:56491073 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Rr340027 within coordinates of
Rr405371 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs237451045
MGI SNP Detail		 Chr17:56491077 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Rr340027 within coordinates of
Rr405371 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs587130965
MGI SNP Detail		 Chr17:56491114 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Rr340027 within coordinates of
Rr405371 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs261406237
MGI SNP Detail		 Chr17:56491119 Cpgi9348 within coordinates of
Gm64852 within coordinates of
Rr340027 within coordinates of
Rr405371 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108646014
MGI SNP Detail		 Chr17:56491283 Cpgi9348 75 bp distal
Rr340027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs108307497
MGI SNP Detail		 Chr17:56491294 Cpgi9348 86 bp distal
Rr340027 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs246762973
MGI SNP Detail		 Chr17:56491320 Cpgi9348 112 bp distal
Rr340027 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265597807
MGI SNP Detail		 Chr17:56491354 Cpgi9348 146 bp distal
Rr340027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs231295976
MGI SNP Detail		 Chr17:56491379 Cpgi9348 171 bp distal
Rr340027 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108701237
MGI SNP Detail		 Chr17:56491397 Cpgi9348 189 bp distal
Rr340027 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580038462
MGI SNP Detail		 Chr17:56491406 Cpgi9348 198 bp distal
Rr340027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs108198541
MGI SNP Detail		 Chr17:56491503 Cpgi9348 295 bp distal
Rr340027 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T G T T G T T T T T T T T T T T T T T T G T T T T T T T T T T
rs223191441
MGI SNP Detail		 Chr17:56491550 Cpgi9348 342 bp distal
Rr340027 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247183696
MGI SNP Detail		 Chr17:56491554 Cpgi9348 346 bp distal
Rr340027 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108393401
MGI SNP Detail		 Chr17:56491625 Cpgi9348 417 bp distal
Rr340027 within coordinates of
 SNP A/G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T A T T T T
rs240826585
MGI SNP Detail		 Chr17:56491673 Cpgi9348 465 bp distal
Rr340027 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258552196
MGI SNP Detail		 Chr17:56491789 Cpgi9348 581 bp distal
Rr340027 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108118797
MGI SNP Detail		 Chr17:56491816 Cpgi9348 608 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs107760575
MGI SNP Detail		 Chr17:56491818 Cpgi9348 610 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs108579980
MGI SNP Detail		 Chr17:56491867 Cpgi9348 659 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218887557
MGI SNP Detail		 Chr17:56491869 Cpgi9348 661 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs47722975
MGI SNP Detail		 Chr17:56491889 Cpgi9348 681 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255411186
MGI SNP Detail		 Chr17:56491921 Cpgi9348 713 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs108930491
MGI SNP Detail		 Chr17:56491985 Cpgi9348 777 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs580851061
MGI SNP Detail		 Chr17:56492036 Cpgi9348 828 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs584201892
MGI SNP Detail		 Chr17:56492037 Cpgi9348 829 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs263333204
MGI SNP Detail		 Chr17:56492045 Cpgi9348 837 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223607335
MGI SNP Detail		 Chr17:56492050 Cpgi9348 842 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237911040
MGI SNP Detail		 Chr17:56492098 Cpgi9348 890 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 129
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory