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Mouse SNP Summary
Symbol
Name
ID 		Cpgi10086
CpG island 10086
MGI:5675173

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236357760
MGI SNP Detail		 Chr18:59305756 Cpgi10086 1980 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261677063
MGI SNP Detail		 Chr18:59305770 Cpgi10086 1966 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220684364
MGI SNP Detail		 Chr18:59305809 Cpgi10086 1927 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242793517
MGI SNP Detail		 Chr18:59305897 Cpgi10086 1839 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/C A A A A C A A A A C A A A A A A C A A A A C A A A C A A A A A A C A C C C A A C A C C C C A C A A C C A C
rs260694798
MGI SNP Detail		 Chr18:59305898 Cpgi10086 1838 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A A A G A A A A G A A A A A A G A A A A G A A A G A A A A A A G A G G G A A G A G G G G A G A G G G A G
rs222222038
MGI SNP Detail		 Chr18:59305899 Cpgi10086 1837 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T A T T T T A T A T T T A A T A T A T T T A T T
rs240925466
MGI SNP Detail		 Chr18:59305912 Cpgi10086 1824 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/T A A A A T A A A A T A A A A A A T A A A A T A A A T A A A A A A T A T T T A A T A T T T T A T A T T T A T
rs262904952
MGI SNP Detail		 Chr18:59305933 Cpgi10086 1803 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230571173
MGI SNP Detail		 Chr18:59305962 Cpgi10086 1774 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250186539
MGI SNP Detail		 Chr18:59305981 Cpgi10086 1755 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264527013
MGI SNP Detail		 Chr18:59305984 Cpgi10086 1752 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229037898
MGI SNP Detail		 Chr18:59306001 Cpgi10086 1735 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs246363594
MGI SNP Detail		 Chr18:59306030 Cpgi10086 1706 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215663651
MGI SNP Detail		 Chr18:59306093 Cpgi10086 1643 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232823453
MGI SNP Detail		 Chr18:59306156 Cpgi10086 1580 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G C C C C G C C C C G C C C C C C G C C C C G C C C G C C C C C C G C G G G C C G C G G G G C G C G G C G
rs256296709
MGI SNP Detail		 Chr18:59306201 Cpgi10086 1535 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C C C T C C C C T C C C C C C T C C C C T C C C T C C C C C C T C T T T C C T C T T T T C T C T T T C T
rs213597965
MGI SNP Detail		 Chr18:59306256 Cpgi10086 1480 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G A G G G G A G G G G G G A G G G G A G G G A G G G G G G A G A A A G G A G A A A A G A G A A A G A
rs237075203
MGI SNP Detail		 Chr18:59306343 Cpgi10086 1393 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29861513
MGI SNP Detail		 Chr18:59306391 Cpgi10086 1345 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/T T A
rs30214645
MGI SNP Detail		 Chr18:59306401 Cpgi10086 1335 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP G/T G T
rs29771905
MGI SNP Detail		 Chr18:59306428 Cpgi10086 1308 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G A A
rs254477196
MGI SNP Detail		 Chr18:59306571 Cpgi10086 1165 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/C A A A A C A A A A C A A A A A A C A A A A C A A A C A A A A A A C A C C C A A C A C C C C A C A C C C A C
rs221980729
MGI SNP Detail		 Chr18:59306597 Cpgi10086 1139 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C C C T C C C C T C C C C C T C C C C T C C C T C C C C C C T C T T T C C T C T T T T C T C T T T C T
rs30269669
MGI SNP Detail		 Chr18:59306602 Cpgi10086 1134 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T C C
rs265381826
MGI SNP Detail		 Chr18:59306645 Cpgi10086 1091 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G A G G G G A G G G G G G A G G G G A G G G A G G G G G G A G A A A G G A G A A A A G A G A A A G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222941395
MGI SNP Detail		 Chr18:59306697 Cpgi10086 1039 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs245306025
MGI SNP Detail		 Chr18:59306776 Cpgi10086 960 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A G A G A A A A G G A G A G A A A G A A
rs29775692
MGI SNP Detail		 Chr18:59306841 Cpgi10086 895 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G A A A
rs229027675
MGI SNP Detail		 Chr18:59306847 Cpgi10086 889 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29723181
MGI SNP Detail		 Chr18:59306862 Cpgi10086 874 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C T T T
rs257735394
MGI SNP Detail		 Chr18:59306887 Cpgi10086 849 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226560834
MGI SNP Detail		 Chr18:59306898 Cpgi10086 838 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C C C T C C C C T C C C C C C T C C C C T C C C T C C C C C C T C T T T C C T C T T T T C T C T T T C T
rs29677305
MGI SNP Detail		 Chr18:59306903 Cpgi10086 833 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T C C C
rs214133950
MGI SNP Detail		 Chr18:59306992 Cpgi10086 744 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs228724195
MGI SNP Detail		 Chr18:59307067 Cpgi10086 669 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T T T T C T T T T C T T T T T T C T T T T C T T T C T T T T T T C T C C C T T C T C C C C T C T C C C T C
rs252367141
MGI SNP Detail		 Chr18:59307104 Cpgi10086 632 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T T T T C T T T T C T T T T T T C T T T T C T T T C T T T T T C T C C C T T C T C C C C T C T T C C T C
rs387892130
MGI SNP Detail		 Chr18:59307118 Cpgi10086 618 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T T T T C T T T T C T T T T T T C T T T T C T T T C T T T T T C T C C C T T C T C C C C T C T C C C T C
rs217329047
MGI SNP Detail		 Chr18:59307157 Cpgi10086 579 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G C C G C G G G G C G G G G G G C G G C G C C G G C G C C G C C C C C C G G C C C C C C G C G C C C G C
rs236549514
MGI SNP Detail		 Chr18:59307170 Cpgi10086 566 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G A G G G G A G G G G G G A G G G G A G G G A G G G G G A G A A A G G A G A A A A G A G G A A G A
rs254632297
MGI SNP Detail		 Chr18:59307319 Cpgi10086 417 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216097333
MGI SNP Detail		 Chr18:59307328 Cpgi10086 408 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G A G G G G A G G G G G G A G G G G A G G G A G G G G G G A G A A A G G A G A A A A G A G G A A G A
rs240019366
MGI SNP Detail		 Chr18:59307421 Cpgi10086 315 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/C A A A A C A A A A C A A A A A A C A A A A C A A A C A A A A A A C A C C C A A C A C C C C A C A C C C A C
rs257948058
MGI SNP Detail		 Chr18:59307501 Cpgi10086 235 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222566851
MGI SNP Detail		 Chr18:59307548 Cpgi10086 188 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242682274
MGI SNP Detail		 Chr18:59307554 Cpgi10086 182 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs248419529
MGI SNP Detail		 Chr18:59307674 Cpgi10086 62 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T T T T C T T T T C T T T T T T C T T T T C T T T C T T T T T T C T C C C T T C T C C C C T C T T C C T C
rs223021371
MGI SNP Detail		 Chr18:59307691 Cpgi10086 45 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240594227
MGI SNP Detail		 Chr18:59307709 Cpgi10086 27 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T T T T C T T T T C T T T T T T C T T T T C T T T C T T T T T T C T C C C T T C T C C C C T C T C C C T C
rs257827983
MGI SNP Detail		 Chr18:59307714 Cpgi10086 22 bp proximal
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/T A A A A T A A A A T A A A A A A T A A A A T A A A T A A A A A A T A T T T A A T A T T T T A T A A T T A T
rs226647952
MGI SNP Detail		 Chr18:59307741 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246467100
MGI SNP Detail		 Chr18:59307767 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs262226607
MGI SNP Detail		 Chr18:59307888 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs229187346
MGI SNP Detail		 Chr18:59307895 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249141871
MGI SNP Detail		 Chr18:59307913 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G A G G G G A G G G G G G A G G G G A G G G A G G G G G G A G A A A G G A G A A A A G A G A A A G A
rs217274131
MGI SNP Detail		 Chr18:59307915 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP G/T G G G G T G G G G T G G G G G G T G G G G T G G G T G G G G G G T G T T T G G T G T T T T G T G G T T G T
rs228459874
MGI SNP Detail		 Chr18:59307916 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs247153814
MGI SNP Detail		 Chr18:59307919 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T T T T C T T T T C T T T T T T C T T T T C T T T C T T T T T T C T C C C T T C T C C C C T C T C C C T C
rs216040166
MGI SNP Detail		 Chr18:59307929 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G A G G G G A G G G G G G A G G G G A G G G A G G G G G G A G A A A G G A G A A A A G A G G A A G A
rs238058387
MGI SNP Detail		 Chr18:59307935 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs262488931
MGI SNP Detail		 Chr18:59307936 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A A G G G G G G G G G G G G G G G G G G G G G G G G G A G G A G A G G G G G G G G G G G G G G G G G G G
rs213911195
MGI SNP Detail		 Chr18:59307992 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G A G G G G A G G G G G G A G G G G A G G G A G G G G G G A G A A A G G A G A A A A G A G G A A G A
rs237529074
MGI SNP Detail		 Chr18:59307998 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs248556712
MGI SNP Detail		 Chr18:59308017 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A A G A A A A G A A A A A A G A A A A G A A A G A A A A A G A G G G A A G A G G G G A G A G G G A
rs223111286
MGI SNP Detail		 Chr18:59308046 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs241054386
MGI SNP Detail		 Chr18:59308072 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A A A G A A A A G A A A A A A G A A A A G A A A G A A A A A G A G G G A A G A G G G G A G A G G G A
rs252205327
MGI SNP Detail		 Chr18:59308141 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G A G G G G A G G G G G A G G G G A G G G A G G G G G G A G A A A G G A G A A A A G A G G A A G A
rs223900617
MGI SNP Detail		 Chr18:59308149 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G C C C G C C C C G C C C C C G C C C C G C C C G C C C C C G C G G G C C G C G G G G C G C G G G C G
rs243898915
MGI SNP Detail		 Chr18:59308153 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G A G G G G A G G G G G A G G G G A G G G A G G G G G A G A A A G G A G A A A A G A G A A A G A
rs264980737
MGI SNP Detail		 Chr18:59308189 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G A G G G G A G G G G G G A G G G G A G G G A G G G G G A G A A A G G A G A A A A G A G A A A G A
rs221094725
MGI SNP Detail		 Chr18:59308215 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A A A A A A A A A A A A G A A A A G A A A G A A A A A A A G G A A A G G G A G A G G A G
rs236889872
MGI SNP Detail		 Chr18:59308277 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C T C C C C T C C C C C C T C C C C T C C C T C C C C C T C T T T C C T C T T T T C T T T T C T
rs261223103
MGI SNP Detail		 Chr18:59308328 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A A G A A A A G A A A A A A G A A A A G A A A G A A A A A G A G G G A A G A G G G G A G G G G A G
rs228537084
MGI SNP Detail		 Chr18:59308336 Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G C C C G C C C C G C C C C C C G C C C C G C C C G C C C C C G C G G G C C G C G G G G C G C G G C G
rs247103133
MGI SNP Detail		 Chr18:59308447 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
Tssr151236 within coordinates of
 SNP C/T T T T T C T T T T C T T T T T T C T T T T C T T T C T T T T T T C T C C C T T C T C C C C T C T C C C T
rs259015486
MGI SNP Detail		 Chr18:59308565 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
Tssr151238 within coordinates of
 SNP G/T G G T G T T T T G T T T T T T T T G T G G T T G T G G T G G G G G G T T G G G G G G T G T T G G T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232340850
MGI SNP Detail		 Chr18:59308566 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A G G G G G G G G G G G G G G G G G G G G G G G G G A G A G G G G G G G G G G G G G G G G G G G G
rs251714579
MGI SNP Detail		 Chr18:59308606 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G G G G C G C C C C G C C C C C C C C G C G G C C G C G G C G G G G G G C C G G G G G G C G C G G G C
rs214275504
MGI SNP Detail		 Chr18:59308617 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs235489559
MGI SNP Detail		 Chr18:59308670 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A G A G G G G A G G G G G G A G G A G A A G G A G A A G G A A A A A A G G A A A A A A G A G G A A G
rs242404153
MGI SNP Detail		 Chr18:59308737 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T T T C T C C C C T C C C C C T C T C T T C C T C T T C T T T T T T C C T T T T T T C T C C T T C T
rs217556440
MGI SNP Detail		 Chr18:59308856 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G A A A G A G G G G A G G G G G G A G G A G A A G G A G A A G G A A A A A A G G A A A A A A G A G G A A G
rs234755330
MGI SNP Detail		 Chr18:59308943 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G A G A A A A G A A A A A G A A G A G G A A G A G G A A G G G G G G A A G G G G G G A G A G G G A G
rs29624948
MGI SNP Detail		 Chr18:59309071 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C T T
rs224496043
MGI SNP Detail		 Chr18:59309120 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C T T T T T T T T T T T T T T T T T T T T T T T T T C T C T C T T T T T T T T T T T T T T T T T T T
rs238791982
MGI SNP Detail		 Chr18:59309198 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46012018
MGI SNP Detail		 Chr18:59309213 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T C C
rs30115263
MGI SNP Detail		 Chr18:59309239 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C T T T
rs30068241
MGI SNP Detail		 Chr18:59309435 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP A/G G A A
rs261016145
MGI SNP Detail		 Chr18:59309605 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222642755
MGI SNP Detail		 Chr18:59309705 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs579855852
MGI SNP Detail		 Chr18:59309795 Chsy3 within coordinates of
Cpgi10086 within coordinates of
Gm54033 within coordinates of
Gm58413 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241273597
MGI SNP Detail		 Chr18:59309877 Chsy3 within coordinates of
Cpgi10086 4 bp distal
Gm54033 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265466489
MGI SNP Detail		 Chr18:59309918 Chsy3 within coordinates of
Cpgi10086 45 bp distal
Gm54033 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230809458
MGI SNP Detail		 Chr18:59310073 Chsy3 within coordinates of
Cpgi10086 200 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs255119990
MGI SNP Detail		 Chr18:59310117 Chsy3 within coordinates of
Cpgi10086 244 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262444710
MGI SNP Detail		 Chr18:59310201 Chsy3 within coordinates of
Cpgi10086 328 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29813925
MGI SNP Detail		 Chr18:59310237 Chsy3 within coordinates of
Cpgi10086 364 bp distal
 SNP A/T T A A A
rs242339324
MGI SNP Detail		 Chr18:59310284 Chsy3 within coordinates of
Cpgi10086 411 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29736830
MGI SNP Detail		 Chr18:59310294 Chsy3 within coordinates of
Cpgi10086 421 bp distal
 SNP C/T T C C C
rs234729353
MGI SNP Detail		 Chr18:59310333 Chsy3 within coordinates of
Cpgi10086 460 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 100 of 151
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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