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Mouse SNP Summary
Symbol
Name
ID 		Cpgi10479
CpG island 10479
MGI:5675565

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs38287998
MGI SNP Detail		 Chr19:5818542 Cpgi10479 1988 bp proximal
Scyl1 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs36704086
MGI SNP Detail		 Chr19:5818561 Cpgi10479 1969 bp proximal
Scyl1 within coordinates of
 SNP A/G G G G G G G A G G G G G G A G
rs235433397
MGI SNP Detail		 Chr19:5818587 Cpgi10479 1943 bp proximal
Scyl1 within coordinates of
 SNP A/G A G
rs6369689
MGI SNP Detail		 Chr19:5818596 Cpgi10479 1934 bp proximal
Scyl1 within coordinates of
 SNP C/T C T
rs6369667
MGI SNP Detail		 Chr19:5818606 Cpgi10479 1924 bp proximal
Scyl1 within coordinates of
 SNP A/G G A
rs6369194
MGI SNP Detail		 Chr19:5818663 Cpgi10479 1867 bp proximal
Scyl1 within coordinates of
 SNP A/G A G G A
rs6369166
MGI SNP Detail		 Chr19:5818689 Cpgi10479 1841 bp proximal
Scyl1 within coordinates of
 SNP C/T C T
rs237195786
MGI SNP Detail		 Chr19:5818693 Cpgi10479 1837 bp proximal
Scyl1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252618488
MGI SNP Detail		 Chr19:5818803 Cpgi10479 1727 bp proximal
Scyl1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6355792
MGI SNP Detail		 Chr19:5818824 Cpgi10479 1706 bp proximal
Scyl1 within coordinates of
 SNP C/T T C
rs6355772
MGI SNP Detail		 Chr19:5818838 Cpgi10479 1692 bp proximal
Scyl1 within coordinates of
 SNP C/T T C
rs224225621
MGI SNP Detail		 Chr19:5818956 Cpgi10479 1574 bp proximal
Scyl1 within coordinates of
 SNP C/T T C
rs251879593
MGI SNP Detail		 Chr19:5818983 Cpgi10479 1547 bp proximal
Scyl1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222302849
MGI SNP Detail		 Chr19:5819020 Cpgi10479 1510 bp proximal
Scyl1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244359569
MGI SNP Detail		 Chr19:5819145 Cpgi10479 1385 bp proximal
Scyl1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264662559
MGI SNP Detail		 Chr19:5819184 Cpgi10479 1346 bp proximal
Scyl1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228884599
MGI SNP Detail		 Chr19:5819186 Cpgi10479 1344 bp proximal
Scyl1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs37685547
MGI SNP Detail		 Chr19:5819187 Cpgi10479 1343 bp proximal
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G A G G G
rs36347205
MGI SNP Detail		 Chr19:5819196 Cpgi10479 1334 bp proximal
Scyl1 within coordinates of
 SNP C/T T T T T T T T T T T T T T C T
rs227768519
MGI SNP Detail		 Chr19:5819231 Cpgi10479 1299 bp proximal
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247493866
MGI SNP Detail		 Chr19:5819237 Cpgi10479 1293 bp proximal
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214176271
MGI SNP Detail		 Chr19:5819323 Cpgi10479 1207 bp proximal
Scyl1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A A A A A A A G A A A A
rs229901286
MGI SNP Detail		 Chr19:5819324 Cpgi10479 1206 bp proximal
Scyl1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs251302727
MGI SNP Detail		 Chr19:5819333 Cpgi10479 1197 bp proximal
Scyl1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs246494953
MGI SNP Detail		 Chr19:5819393 Cpgi10479 1137 bp proximal
Scyl1 within coordinates of
 SNP G/T G T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36498194
MGI SNP Detail		 Chr19:5819441 Cpgi10479 1089 bp proximal
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G A G G G G
rs211707393
MGI SNP Detail		 Chr19:5819481 Cpgi10479 1049 bp proximal
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37261777
MGI SNP Detail		 Chr19:5819554 Cpgi10479 976 bp proximal
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G A G G G G
rs252414459
MGI SNP Detail		 Chr19:5819584 Cpgi10479 946 bp proximal
Scyl1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs217294398
MGI SNP Detail		 Chr19:5819587 Cpgi10479 943 bp proximal
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232856408
MGI SNP Detail		 Chr19:5819722 Cpgi10479 808 bp proximal
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251821518
MGI SNP Detail		 Chr19:5819927 Cpgi10479 603 bp proximal
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222464084
MGI SNP Detail		 Chr19:5820016 Cpgi10479 514 bp proximal
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247027764
MGI SNP Detail		 Chr19:5820020 Cpgi10479 510 bp proximal
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255666987
MGI SNP Detail		 Chr19:5820091 Cpgi10479 439 bp proximal
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221351311
MGI SNP Detail		 Chr19:5820111 Cpgi10479 419 bp proximal
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs242062479
MGI SNP Detail		 Chr19:5820150 Cpgi10479 380 bp proximal
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261355531
MGI SNP Detail		 Chr19:5820196 Cpgi10479 334 bp proximal
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227710877
MGI SNP Detail		 Chr19:5820212 Cpgi10479 318 bp proximal
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241625005
MGI SNP Detail		 Chr19:5820272 Cpgi10479 258 bp proximal
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265134841
MGI SNP Detail		 Chr19:5820296 Cpgi10479 234 bp proximal
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs231175441
MGI SNP Detail		 Chr19:5820338 Cpgi10479 192 bp proximal
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255940427
MGI SNP Detail		 Chr19:5820569 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211838811
MGI SNP Detail		 Chr19:5820609 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224150047
MGI SNP Detail		 Chr19:5820682 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs36832694
MGI SNP Detail		 Chr19:5820690 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G A G
rs36979209
MGI SNP Detail		 Chr19:5820707 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G A G
rs232801089
MGI SNP Detail		 Chr19:5820718 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36669551
MGI SNP Detail		 Chr19:5820731 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP C/G G G G G G G C G G G G G G C G
rs13464705
MGI SNP Detail		 Chr19:5820784 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236872090
MGI SNP Detail		 Chr19:5820915 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs260822547
MGI SNP Detail		 Chr19:5820923 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221788969
MGI SNP Detail		 Chr19:5820927 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235714963
MGI SNP Detail		 Chr19:5820932 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255316223
MGI SNP Detail		 Chr19:5821014 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221096089
MGI SNP Detail		 Chr19:5821030 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs241565340
MGI SNP Detail		 Chr19:5821197 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Scyl1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs262564777
MGI SNP Detail		 Chr19:5821408 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Rr405811 within coordinates of
Scyl1 within coordinates of
Tssr157642 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223685715
MGI SNP Detail		 Chr19:5821429 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Rr405811 within coordinates of
Scyl1 within coordinates of
Tssr157642 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241532879
MGI SNP Detail		 Chr19:5821454 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Rr405811 within coordinates of
Scyl1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs264941789
MGI SNP Detail		 Chr19:5821464 Cpgi10479 within coordinates of
Rr363624 within coordinates of
Rr405811 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs224062273
MGI SNP Detail		 Chr19:5821481 Cpgi10479 within coordinates of
Gm59602 within coordinates of
Rr363624 within coordinates of
Rr405811 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246512851
MGI SNP Detail		 Chr19:5821537 Cpgi10479 within coordinates of
Gm59602 within coordinates of
Gm59603 within coordinates of
Rr363624 within coordinates of
Rr405811 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256795489
MGI SNP Detail		 Chr19:5821550 Cpgi10479 within coordinates of
Gm59602 within coordinates of
Gm59603 within coordinates of
Rr363624 within coordinates of
Rr405811 within coordinates of
 SNP A/T T A
rs259494088
MGI SNP Detail		 Chr19:5821654 Cpgi10479 54 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
Rr363624 within coordinates of
Tssr157644 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs226536635
MGI SNP Detail		 Chr19:5821670 Cpgi10479 70 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
Rr363624 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257915234
MGI SNP Detail		 Chr19:5821696 Cpgi10479 96 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
Rr363624 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213721430
MGI SNP Detail		 Chr19:5821821 Cpgi10479 221 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
Rr363624 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs220775352
MGI SNP Detail		 Chr19:5821864 Cpgi10479 264 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
Rr363624 within coordinates of
 SNP G/T T G
rs249026005
MGI SNP Detail		 Chr19:5821884 Cpgi10479 284 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
Rr363624 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs212764030
MGI SNP Detail		 Chr19:5821891 Cpgi10479 291 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
Rr363624 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs235652114
MGI SNP Detail		 Chr19:5821917 Cpgi10479 317 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
Rr363624 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255440418
MGI SNP Detail		 Chr19:5821918 Cpgi10479 318 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
Rr363624 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221042609
MGI SNP Detail		 Chr19:5822020 Cpgi10479 420 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578938679
MGI SNP Detail		 Chr19:5822058 Cpgi10479 458 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238746718
MGI SNP Detail		 Chr19:5822084 Cpgi10479 484 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262081801
MGI SNP Detail		 Chr19:5822172 Cpgi10479 572 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223808527
MGI SNP Detail		 Chr19:5822213 Cpgi10479 613 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs244525936
MGI SNP Detail		 Chr19:5822224 Cpgi10479 624 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs262068085
MGI SNP Detail		 Chr19:5822329 Cpgi10479 729 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222194261
MGI SNP Detail		 Chr19:5822373 Cpgi10479 773 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs240566317
MGI SNP Detail		 Chr19:5822374 Cpgi10479 774 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235652282
MGI SNP Detail		 Chr19:5822379 Cpgi10479 779 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G G A
rs264993631
MGI SNP Detail		 Chr19:5822499 Cpgi10479 899 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs585417009
MGI SNP Detail		 Chr19:5822531 Cpgi10479 931 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs230846331
MGI SNP Detail		 Chr19:5822577 Cpgi10479 977 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs579722239
MGI SNP Detail		 Chr19:5822614 Cpgi10479 1014 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582952551
MGI SNP Detail		 Chr19:5822858 Cpgi10479 1258 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A G G A A G A A A A G A A G A A G A A A A A A A A A A A A A G A A A A
rs585343239
MGI SNP Detail		 Chr19:5822889 Cpgi10479 1289 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A G G A A G A A A A G A A G A A G A A A A A A A A A A A A A G A A A A
rs580549230
MGI SNP Detail		 Chr19:5822973 Cpgi10479 1373 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs584005400
MGI SNP Detail		 Chr19:5822980 Cpgi10479 1380 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G
rs252554268
MGI SNP Detail		 Chr19:5823057 Cpgi10479 1457 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587426337
MGI SNP Detail		 Chr19:5823112 Cpgi10479 1512 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C C T T C T T T T C T T C T T T T T T T T T T T T T T T T T T T T
rs580169028
MGI SNP Detail		 Chr19:5823124 Cpgi10479 1524 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583532815
MGI SNP Detail		 Chr19:5823169 Cpgi10479 1569 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586575890
MGI SNP Detail		 Chr19:5823179 Cpgi10479 1579 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580912270
MGI SNP Detail		 Chr19:5823195 Cpgi10479 1595 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584104186
MGI SNP Detail		 Chr19:5823338 Cpgi10479 1738 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G A G G A G G G G G G G G G G G G G G G A G A G G A A
rs586586829
MGI SNP Detail		 Chr19:5823351 Cpgi10479 1751 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G A G G A G G G G G G G G G G G G G G G A G A G G A A
rs581810788
MGI SNP Detail		 Chr19:5823384 Cpgi10479 1784 bp distal
Gm59602 within coordinates of
Gm59603 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 100
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory