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Mouse SNP Summary
Symbol
Name
ID 		Cpgi11378
CpG island 11378
MGI:5676464

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Showing SNP(s) 1 - 100 of 119

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240708411
MGI SNP Detail		 Chr2:27402670 Cpgi11378 1961 bp proximal
Gm74603 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254680395
MGI SNP Detail		 Chr2:27402738 Cpgi11378 1893 bp proximal
Gm74603 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582504033
MGI SNP Detail		 Chr2:27402860 Cpgi11378 1771 bp proximal
Gm74603 within coordinates of
 SNP A/G G G G G G G A G A G A G G G A G G G G
rs252592993
MGI SNP Detail		 Chr2:27402883 Cpgi11378 1748 bp proximal
Gm74603 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A G A A G A A A G A A A A G A A A A A G A A A A A G A A A
rs223180813
MGI SNP Detail		 Chr2:27402936 Cpgi11378 1695 bp proximal
Gm74603 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs245543613
MGI SNP Detail		 Chr2:27403001 Cpgi11378 1630 bp proximal
Gm74603 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261781980
MGI SNP Detail		 Chr2:27403023 Cpgi11378 1608 bp proximal
Gm74603 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs228091987
MGI SNP Detail		 Chr2:27403055 Cpgi11378 1576 bp proximal
Gm74603 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G G G A A A A G A A A A A A A G A A G G
rs241555286
MGI SNP Detail		 Chr2:27403154 Cpgi11378 1477 bp proximal
Gm74603 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259021708
MGI SNP Detail		 Chr2:27403164 Cpgi11378 1467 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227429528
MGI SNP Detail		 Chr2:27403229 Cpgi11378 1402 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs245195282
MGI SNP Detail		 Chr2:27403234 Cpgi11378 1397 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs215349246
MGI SNP Detail		 Chr2:27403258 Cpgi11378 1373 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230207004
MGI SNP Detail		 Chr2:27403264 Cpgi11378 1367 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs254233414
MGI SNP Detail		 Chr2:27403281 Cpgi11378 1350 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G G G G G G G G G G G G G
rs586519916
MGI SNP Detail		 Chr2:27403413 Cpgi11378 1218 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212122894
MGI SNP Detail		 Chr2:27403414 Cpgi11378 1217 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579545861
MGI SNP Detail		 Chr2:27403420 Cpgi11378 1211 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs236732634
MGI SNP Detail		 Chr2:27403428 Cpgi11378 1203 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254803898
MGI SNP Detail		 Chr2:27403488 Cpgi11378 1143 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs216333054
MGI SNP Detail		 Chr2:27403489 Cpgi11378 1142 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234251498
MGI SNP Detail		 Chr2:27403516 Cpgi11378 1115 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs258136363
MGI SNP Detail		 Chr2:27403517 Cpgi11378 1114 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222813498
MGI SNP Detail		 Chr2:27403536 Cpgi11378 1095 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242887480
MGI SNP Detail		 Chr2:27403565 Cpgi11378 1066 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261256958
MGI SNP Detail		 Chr2:27403736 Cpgi11378 895 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219893924
MGI SNP Detail		 Chr2:27403775 Cpgi11378 856 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241276910
MGI SNP Detail		 Chr2:27403888 Cpgi11378 743 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs258973842
MGI SNP Detail		 Chr2:27403903 Cpgi11378 728 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP A/C/T C C C C C C C C C C C C C C C C C C C T C C C C C C T C C C C C T C C C C C C C C C C C C C A C C C C
rs227582558
MGI SNP Detail		 Chr2:27403960 Cpgi11378 671 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239059155
MGI SNP Detail		 Chr2:27403991 Cpgi11378 640 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262715348
MGI SNP Detail		 Chr2:27404182 Cpgi11378 449 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230391597
MGI SNP Detail		 Chr2:27404192 Cpgi11378 439 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250086834
MGI SNP Detail		 Chr2:27404241 Cpgi11378 390 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212508739
MGI SNP Detail		 Chr2:27404298 Cpgi11378 333 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229273726
MGI SNP Detail		 Chr2:27404345 Cpgi11378 286 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs248128190
MGI SNP Detail		 Chr2:27404367 Cpgi11378 264 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216252835
MGI SNP Detail		 Chr2:27404382 Cpgi11378 249 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234370537
MGI SNP Detail		 Chr2:27404435 Cpgi11378 196 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256570956
MGI SNP Detail		 Chr2:27404469 Cpgi11378 162 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214167998
MGI SNP Detail		 Chr2:27404482 Cpgi11378 149 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs237495764
MGI SNP Detail		 Chr2:27404486 Cpgi11378 145 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256030580
MGI SNP Detail		 Chr2:27404519 Cpgi11378 112 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A A T T T T T T T T T T T T T T T T T
rs217808260
MGI SNP Detail		 Chr2:27404520 Cpgi11378 111 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G G G G G G G G G G G G G
rs234838526
MGI SNP Detail		 Chr2:27404608 Cpgi11378 23 bp proximal
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252381177
MGI SNP Detail		 Chr2:27404655 Cpgi11378 within coordinates of
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221385416
MGI SNP Detail		 Chr2:27404750 Cpgi11378 within coordinates of
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239226600
MGI SNP Detail		 Chr2:27404763 Cpgi11378 within coordinates of
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265242630
MGI SNP Detail		 Chr2:27404764 Cpgi11378 within coordinates of
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs222427765
MGI SNP Detail		 Chr2:27404838 Cpgi11378 within coordinates of
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244918742
MGI SNP Detail		 Chr2:27404885 Cpgi11378 within coordinates of
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs261621354
MGI SNP Detail		 Chr2:27404929 Cpgi11378 within coordinates of
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs229395590
MGI SNP Detail		 Chr2:27404984 Cpgi11378 within coordinates of
Gm74603 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248042320
MGI SNP Detail		 Chr2:27405157 Cpgi11378 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260020130
MGI SNP Detail		 Chr2:27405242 Cpgi11378 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs227704694
MGI SNP Detail		 Chr2:27405317 Cpgi11378 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs251859323
MGI SNP Detail		 Chr2:27405344 Cpgi11378 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214674982
MGI SNP Detail		 Chr2:27405384 Cpgi11378 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A T A A T A A A T A A A A T T T A A A A T A A A A A A A T A A T
rs235672670
MGI SNP Detail		 Chr2:27405476 Cpgi11378 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253247399
MGI SNP Detail		 Chr2:27405486 Cpgi11378 within coordinates of
Gm74607 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs211798077
MGI SNP Detail		 Chr2:27405648 Cpgi11378 within coordinates of
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234955156
MGI SNP Detail		 Chr2:27405717 Cpgi11378 within coordinates of
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252346218
MGI SNP Detail		 Chr2:27405770 Cpgi11378 within coordinates of
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221190838
MGI SNP Detail		 Chr2:27405816 Cpgi11378 within coordinates of
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239610549
MGI SNP Detail		 Chr2:27405824 Cpgi11378 within coordinates of
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257816553
MGI SNP Detail		 Chr2:27405955 Cpgi11378 within coordinates of
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs222143889
MGI SNP Detail		 Chr2:27405995 Cpgi11378 within coordinates of
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242001562
MGI SNP Detail		 Chr2:27406035 Cpgi11378 within coordinates of
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs255917349
MGI SNP Detail		 Chr2:27406136 Cpgi11378 101 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223586211
MGI SNP Detail		 Chr2:27406140 Cpgi11378 105 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242185693
MGI SNP Detail		 Chr2:27406150 Cpgi11378 115 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260131041
MGI SNP Detail		 Chr2:27406160 Cpgi11378 125 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs227389126
MGI SNP Detail		 Chr2:27406190 Cpgi11378 155 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256430626
MGI SNP Detail		 Chr2:27406208 Cpgi11378 173 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs583241292
MGI SNP Detail		 Chr2:27406236 Cpgi11378 201 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs587050546
MGI SNP Detail		 Chr2:27406242 Cpgi11378 207 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262559764
MGI SNP Detail		 Chr2:27406287 Cpgi11378 252 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs229686861
MGI SNP Detail		 Chr2:27406409 Cpgi11378 374 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs249317421
MGI SNP Detail		 Chr2:27406450 Cpgi11378 415 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217525663
MGI SNP Detail		 Chr2:27406547 Cpgi11378 512 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A G A
rs228994869
MGI SNP Detail		 Chr2:27406599 Cpgi11378 564 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246486401
MGI SNP Detail		 Chr2:27406758 Cpgi11378 723 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C T C C C T C C C C C C T C C C C C C C T C C T T
rs215738184
MGI SNP Detail		 Chr2:27406784 Cpgi11378 749 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237544780
MGI SNP Detail		 Chr2:27406785 Cpgi11378 750 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27216822
MGI SNP Detail		 Chr2:27406875 Cpgi11378 840 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP C/G C C C C C C G C C C G G C G G
rs213679727
MGI SNP Detail		 Chr2:27406890 Cpgi11378 855 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27216821
MGI SNP Detail		 Chr2:27406921 Cpgi11378 886 bp distal
Rr372951 within coordinates of
Rr56501 within coordinates of
Wdr5 within coordinates of
 SNP G/T G G G G G G G G G G G G G T G
rs27216820
MGI SNP Detail		 Chr2:27407125 Cpgi11378 1090 bp distal
Rr372951 within coordinates of
Wdr5 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs27216819
MGI SNP Detail		 Chr2:27407151 Cpgi11378 1116 bp distal
Rr372951 within coordinates of
Wdr5 within coordinates of
 SNP C/T C C C C C C C C C C C T C C C
rs27216818
MGI SNP Detail		 Chr2:27407193 Cpgi11378 1158 bp distal
Rr372951 within coordinates of
Wdr5 within coordinates of
 SNP A/G A A A A A A A A A A A A A A G
rs253769255
MGI SNP Detail		 Chr2:27407194 Cpgi11378 1159 bp distal
Rr372951 within coordinates of
Wdr5 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs224474853
MGI SNP Detail		 Chr2:27407216 Cpgi11378 1181 bp distal
Rr372951 within coordinates of
Wdr5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244164608
MGI SNP Detail		 Chr2:27407247 Cpgi11378 1212 bp distal
Wdr5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27216817
MGI SNP Detail		 Chr2:27407259 Cpgi11378 1224 bp distal
Wdr5 within coordinates of
 SNP A/G A A A A A A A A A A A A A G A
rs27216816
MGI SNP Detail		 Chr2:27407284 Cpgi11378 1249 bp distal
Wdr5 within coordinates of
 SNP C/T C C C C C C T C C C C C C C T
rs27216815
MGI SNP Detail		 Chr2:27407315 Cpgi11378 1280 bp distal
Wdr5 within coordinates of
 SNP A/T T T T T T T T T T T T T T T A
rs260279672
MGI SNP Detail		 Chr2:27407326 Cpgi11378 1291 bp distal
Wdr5 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27216814
MGI SNP Detail		 Chr2:27407331 Cpgi11378 1296 bp distal
Wdr5 within coordinates of
 SNP C/T T T T T T T T T T T T T T C
rs27216813
MGI SNP Detail		 Chr2:27407338 Cpgi11378 1303 bp distal
Wdr5 within coordinates of
 SNP C/T T T T T T T C T T T T T T T T
rs215702399
MGI SNP Detail		 Chr2:27407354 Cpgi11378 1319 bp distal
Wdr5 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C C C C C C C C C T C C T T
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Showing SNP(s) 1 - 100 of 119
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory