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Mouse SNP Summary
Symbol
Name
ID 		Cpgi12019
CpG island 12019
MGI:5677105

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Showing SNP(s) 1 - 79 of 79

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33424439
MGI SNP Detail		 Chr2:105500817 Cpgi12019 1922 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T C
rs583794583
MGI SNP Detail		 Chr2:105501007 Cpgi12019 1732 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G A G G G G G G G G G A A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs586791471
MGI SNP Detail		 Chr2:105501093 Cpgi12019 1646 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263386063
MGI SNP Detail		 Chr2:105501113 Cpgi12019 1626 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A G G A G G A A A A A A A A A A A A G A A G G A G A A A A G A A A A A A A A A A A A A A A A A A A A A
rs229836766
MGI SNP Detail		 Chr2:105501158 Cpgi12019 1581 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239657089
MGI SNP Detail		 Chr2:105501166 Cpgi12019 1573 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/T T T T T T T T T T T A A T T T T T T T A T A A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs255985211
MGI SNP Detail		 Chr2:105501191 Cpgi12019 1548 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T C T T T T T T T T T C T T T T T C T T T T T C T T T T T T T T T T T T T T T T T T T
rs224975928
MGI SNP Detail		 Chr2:105501200 Cpgi12019 1539 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29968629
MGI SNP Detail		 Chr2:105501240 Cpgi12019 1499 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A G A G
rs218988301
MGI SNP Detail		 Chr2:105501242 Cpgi12019 1497 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231776059
MGI SNP Detail		 Chr2:105501258 Cpgi12019 1481 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580517499
MGI SNP Detail		 Chr2:105501276 Cpgi12019 1463 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583953552
MGI SNP Detail		 Chr2:105501291 Cpgi12019 1448 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258475891
MGI SNP Detail		 Chr2:105501323 Cpgi12019 1416 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T C C T T T T T T T C T C C T T T T C T T T T T C T T T T T T T T T T T T T T T T T T T
rs213827409
MGI SNP Detail		 Chr2:105501345 Cpgi12019 1394 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs232211374
MGI SNP Detail		 Chr2:105501618 Cpgi12019 1121 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs248256300
MGI SNP Detail		 Chr2:105501657 Cpgi12019 1082 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T C C T T T T T T T T T C C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs213254336
MGI SNP Detail		 Chr2:105501723 Cpgi12019 1016 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A G G A A A A A A A A A G A A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs234791398
MGI SNP Detail		 Chr2:105501750 Cpgi12019 989 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A G A A A A A A A G A G G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs261068745
MGI SNP Detail		 Chr2:105501951 Cpgi12019 788 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224545647
MGI SNP Detail		 Chr2:105501990 Cpgi12019 749 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244882634
MGI SNP Detail		 Chr2:105502035 Cpgi12019 704 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G A A G G G G G G G G G A A G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs263229401
MGI SNP Detail		 Chr2:105502075 Cpgi12019 664 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222376864
MGI SNP Detail		 Chr2:105502096 Cpgi12019 643 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239359100
MGI SNP Detail		 Chr2:105502159 Cpgi12019 580 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255768573
MGI SNP Detail		 Chr2:105502232 Cpgi12019 507 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224944411
MGI SNP Detail		 Chr2:105502247 Cpgi12019 492 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/C A A A A A A A A A A C C A A A A A A A C A C C A A A A C A A A A A C A A A A A A A A A A A A A A C A A A A
rs241983843
MGI SNP Detail		 Chr2:105502257 Cpgi12019 482 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A G G A A A A A A A G A G G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs264339641
MGI SNP Detail		 Chr2:105502286 Cpgi12019 453 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232003768
MGI SNP Detail		 Chr2:105502403 Cpgi12019 336 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C T T C C C C C C C C C T T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs253299740
MGI SNP Detail		 Chr2:105502444 Cpgi12019 295 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214381305
MGI SNP Detail		 Chr2:105502466 Cpgi12019 273 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226306701
MGI SNP Detail		 Chr2:105502481 Cpgi12019 258 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242380535
MGI SNP Detail		 Chr2:105502708 Cpgi12019 31 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr37203 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212975859
MGI SNP Detail		 Chr2:105502712 Cpgi12019 27 bp proximal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr37203 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234701247
MGI SNP Detail		 Chr2:105502789 Cpgi12019 within coordinates of
Pax6 within coordinates of
Rr370602 within coordinates of
Rr37203 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T C T T T T T T T C T C C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs260562064
MGI SNP Detail		 Chr2:105502793 Cpgi12019 within coordinates of
Pax6 within coordinates of
Rr370602 within coordinates of
Rr37203 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216017079
MGI SNP Detail		 Chr2:105502861 Cpgi12019 within coordinates of
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586695952
MGI SNP Detail		 Chr2:105502888 Cpgi12019 within coordinates of
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs580704412
MGI SNP Detail		 Chr2:105502889 Cpgi12019 within coordinates of
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241426425
MGI SNP Detail		 Chr2:105502916 Cpgi12019 within coordinates of
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257374459
MGI SNP Detail		 Chr2:105502923 Cpgi12019 within coordinates of
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219362719
MGI SNP Detail		 Chr2:105502928 Cpgi12019 within coordinates of
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232559215
MGI SNP Detail		 Chr2:105502930 Cpgi12019 within coordinates of
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/G C C C C C C C C C C G C C C C C C C C C G C C C C C G C C C C C G C C C C C C C C C C C C C C C C C C C
rs249239914
MGI SNP Detail		 Chr2:105502996 Cpgi12019 60 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587077977
MGI SNP Detail		 Chr2:105503010 Cpgi12019 74 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218580141
MGI SNP Detail		 Chr2:105503014 Cpgi12019 78 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs247389553
MGI SNP Detail		 Chr2:105503042 Cpgi12019 106 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP G/T T T T T T T T T T G T T T T T T T T T G G T T T T G T T T T G T T T T T T T T T T T T T T T T T T T
rs266136510
MGI SNP Detail		 Chr2:105503049 Cpgi12019 113 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs224217511
MGI SNP Detail		 Chr2:105503055 Cpgi12019 119 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C T C C C C C C C C C T C C C C C T C C C C T C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248785506
MGI SNP Detail		 Chr2:105503077 Cpgi12019 141 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262327057
MGI SNP Detail		 Chr2:105503113 Cpgi12019 177 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T C T T T T T T T T T C T T T T T C T T T T T C T T T T T T T T T T T T T T T T T T T
rs226216319
MGI SNP Detail		 Chr2:105503131 Cpgi12019 195 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580922317
MGI SNP Detail		 Chr2:105503144 Cpgi12019 208 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs242485347
MGI SNP Detail		 Chr2:105503195 Cpgi12019 259 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254673077
MGI SNP Detail		 Chr2:105503212 Cpgi12019 276 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228555894
MGI SNP Detail		 Chr2:105503226 Cpgi12019 290 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP G/T T T T T T T T T T T G T T T T T T T G T G G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs254811867
MGI SNP Detail		 Chr2:105503381 Cpgi12019 445 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs216608885
MGI SNP Detail		 Chr2:105503453 Cpgi12019 517 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP G/T T T T T T T T T T T G G T T T T T T T T T G G T T T T G T T T T T G T T T T T T T T T T T T T T T T T T T
rs239105922
MGI SNP Detail		 Chr2:105503658 Cpgi12019 722 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A G A A A A A A A A A G G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs255595079
MGI SNP Detail		 Chr2:105503872 Cpgi12019 936 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33170336
MGI SNP Detail		 Chr2:105504000 Cpgi12019 1064 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/G G C G
rs232467109
MGI SNP Detail		 Chr2:105504012 Cpgi12019 1076 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249401118
MGI SNP Detail		 Chr2:105504023 Cpgi12019 1087 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G A A A A A A A A A A G G A A A A A A A G A G G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs218547397
MGI SNP Detail		 Chr2:105504024 Cpgi12019 1088 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241677152
MGI SNP Detail		 Chr2:105504026 Cpgi12019 1090 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G A A G G G G G G G G G A A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs260671951
MGI SNP Detail		 Chr2:105504033 Cpgi12019 1097 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C T T C C C C C C C C C T T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs224155468
MGI SNP Detail		 Chr2:105504077 Cpgi12019 1141 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs246407744
MGI SNP Detail		 Chr2:105504124 Cpgi12019 1188 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/G C C C C C C C C C C G G C C C C C C C C C G C C C C C G C C C C C G C C C C C C C C C C C C C C C C C C C
rs255193506
MGI SNP Detail		 Chr2:105504431 Cpgi12019 1495 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219971757
MGI SNP Detail		 Chr2:105504494 Cpgi12019 1558 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP G/T T T T T T T T T T T G G T T T T T T T G T G G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs236015264
MGI SNP Detail		 Chr2:105504505 Cpgi12019 1569 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254765842
MGI SNP Detail		 Chr2:105504723 Cpgi12019 1787 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233307252
MGI SNP Detail		 Chr2:105504784 Cpgi12019 1848 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/C C C C C C C C C C C A A C C C C C C C C C A A C C C C A C C C C C A C C C C C C C C C C C C C C C C C C C
rs260285661
MGI SNP Detail		 Chr2:105504806 Cpgi12019 1870 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33198906
MGI SNP Detail		 Chr2:105504810 Cpgi12019 1874 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T C T
rs233513609
MGI SNP Detail		 Chr2:105504881 Cpgi12019 1945 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP C/T T T T T T T T T T T C C T T T T T T T T T C C T T T T C T T T T T C T T T T T T T T T T T T T T T T T T T
rs251076253
MGI SNP Detail		 Chr2:105504886 Cpgi12019 1950 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs214634230
MGI SNP Detail		 Chr2:105504900 Cpgi12019 1964 bp distal
Pax6 within coordinates of
Rr370602 within coordinates of
Rr55347 within coordinates of
Tssr19254 within coordinates of
 SNP C/T T T T T T T T T T T C T T T T T T T T T C C T T T T C T T T T T C T T T T T T T T T T T T T T T T T T T
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Showing SNP(s) 1 - 79 of 79
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory