Cpgi12118 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Cpgi12118
CpG island 12118
MGI:5677204

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Showing SNP(s) 1 - 74 of 74

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs33386377 MGI SNP Detail	Chr2:119166207	Cpgi12118 1805 bp proximal	SNP	C/T					T											C										T						C																		T
rs228486304 MGI SNP Detail	Chr2:119166232	Cpgi12118 1780 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs242144957 MGI SNP Detail	Chr2:119166233	Cpgi12118 1779 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs27423743 MGI SNP Detail	Chr2:119166244	Cpgi12118 1768 bp proximal	SNP	A/G		A			G	G		G		A			A								G					G	G			G					G	A				A		G												G
rs27423742 MGI SNP Detail	Chr2:119166264	Cpgi12118 1748 bp proximal	SNP	C/T		C			T	C		T		C			C			C					C					T	C			C		C			C	C				C		C								T				C
rs27423741 MGI SNP Detail	Chr2:119166324	Cpgi12118 1688 bp proximal	SNP	G/T		G			G	G		G		G			G			T					G					G	G			T		T				G				G		T								G				G
rs214610249 MGI SNP Detail	Chr2:119166562	Cpgi12118 1450 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs232757470 MGI SNP Detail	Chr2:119166668	Cpgi12118 1344 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs245615478 MGI SNP Detail	Chr2:119166709	Cpgi12118 1303 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs234648093 MGI SNP Detail	Chr2:119166793	Cpgi12118 1219 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs248660738 MGI SNP Detail	Chr2:119166804	Cpgi12118 1208 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs27423740 MGI SNP Detail	Chr2:119166847	Cpgi12118 1165 bp proximal	SNP	G/T		G			G	G		G		G			G													G	G			T						G				G		T												G
rs27423739 MGI SNP Detail	Chr2:119166910	Cpgi12118 1102 bp proximal	SNP	G/T		T		T	T	T		T		T			T			G					T					T	T			G		G			G	T				T		G								T				T
rs238693965 MGI SNP Detail	Chr2:119166990	Cpgi12118 1022 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs256797462 MGI SNP Detail	Chr2:119166994	Cpgi12118 1018 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs27423738 MGI SNP Detail	Chr2:119167019	Cpgi12118 993 bp proximal	SNP	C/T		C			C	C		C		C			C								T					C	C			C					C	C				C		C												C
rs240470719 MGI SNP Detail	Chr2:119167044	Cpgi12118 968 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs27423737 MGI SNP Detail	Chr2:119167175	Cpgi12118 837 bp proximal	SNP	G/T		T			G	T		G		T			T								G					G	T			G					G	T				T		G												T
rs222496829 MGI SNP Detail	Chr2:119167357	Cpgi12118 655 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs27423736 MGI SNP Detail	Chr2:119167405	Cpgi12118 607 bp proximal	SNP	C/T		C		C	C	C		C		C			C			T					C					C	C			T		T			C	C				C		T								C				C
rs264905661 MGI SNP Detail	Chr2:119167458	Cpgi12118 554 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs27423735 MGI SNP Detail	Chr2:119167467	Cpgi12118 545 bp proximal	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs246939445 MGI SNP Detail	Chr2:119167796	Cpgi12118 216 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs50908482 MGI SNP Detail	Chr2:119167964	Cpgi12118 48 bp proximal	SNP	C/G				G	G																					G						C																		G
rs27423734 MGI SNP Detail	Chr2:119168053	Cpgi12118 within coordinates of	SNP	A/G		A		A	A	A		A		A			A								A					A	A			G		G			A	A				A		G								A				A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs245565277 MGI SNP Detail	Chr2:119168293	Cpgi12118 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs217600062 MGI SNP Detail	Chr2:119168311	Cpgi12118 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		T	C	C	C	C
rs228739886 MGI SNP Detail	Chr2:119168398	Cpgi12118 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs49259859 MGI SNP Detail	Chr2:119168564	Cpgi12118 within coordinates of Rr397227 within coordinates of	SNP	G				G																						G
rs213837636 MGI SNP Detail	Chr2:119168662	Cpgi12118 within coordinates of Rr397227 within coordinates of	SNP	C/T																																C																		T
rs236803726 MGI SNP Detail	Chr2:119168690	Cpgi12118 within coordinates of Rr397227 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs230811255 MGI SNP Detail	Chr2:119168698	Cpgi12118 within coordinates of Rr397227 within coordinates of	SNP	A/C																																A																		C
rs27423733 MGI SNP Detail	Chr2:119168753	Cpgi12118 within coordinates of Rr397227 within coordinates of	SNP	A/G		A			A	A		A		A			A								A					A	A			G		G			A	A				A		G								A				A
rs233470361 MGI SNP Detail	Chr2:119168777	Cpgi12118 within coordinates of Rr397227 within coordinates of	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs27423732 MGI SNP Detail	Chr2:119168839	Cpgi12118 within coordinates of	SNP	A/T		T			T	T		T		T			T								T					T				A		A				T				T		A								T				T
rs243077907 MGI SNP Detail	Chr2:119168870	Cpgi12118 within coordinates of	SNP	C/T																																C																		T
rs27423731 MGI SNP Detail	Chr2:119168871	Cpgi12118 within coordinates of	SNP	A/G		G											G													G				A		A			G					G		A								G				G
rs255412969 MGI SNP Detail	Chr2:119168889	Cpgi12118 within coordinates of	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs221206467 MGI SNP Detail	Chr2:119168982	Cpgi12118 within coordinates of	SNP	C/T																																C																		T
rs238841030 MGI SNP Detail	Chr2:119168986	Cpgi12118 within coordinates of	SNP	C/T																																C																		T
rs27423730 MGI SNP Detail	Chr2:119169108	Cpgi12118 77 bp distal	SNP	A/C		C			C	C		C		C			C													C	C			A		A			C	C				C		A								C				C
rs219190292 MGI SNP Detail	Chr2:119169186	Cpgi12118 155 bp distal	SNP	C/G																																C																		G
rs240609820 MGI SNP Detail	Chr2:119169198	Cpgi12118 167 bp distal	SNP	A/G							A							A	A	A	A	A	A	G				A		G			A	A		A											A
rs242620410 MGI SNP Detail	Chr2:119169401	Cpgi12118 370 bp distal	SNP	A/G	G	G	G		G	G	A	G	G	G	G		G	A	A	A	A	A	A	G	G	G	G	A	G	G	G	G	A	A	G	A	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G		G	G	G
rs213161311 MGI SNP Detail	Chr2:119169404	Cpgi12118 373 bp distal	SNP	C/T	C	C	C		C	C	T	C	C	C	C		C	T	T	T	T	T	T	C	C	C	C	T	C	C	C	C	T	T	C	T	C	C	C	C	C	C	C	C	C		T	C	C	C	C	C	C	C		C	C	C
rs27423729 MGI SNP Detail	Chr2:119169481	Cpgi12118 450 bp distal	SNP	C/T		T			T	T		T		T			T								T					T	T			C		C			T	T				T		C								T				T
rs27423728 MGI SNP Detail	Chr2:119169503	Cpgi12118 472 bp distal	SNP	C/T		C			C	C		C		C			C								C					C	C			T		T				C				C		T								C				C
rs260245217 MGI SNP Detail	Chr2:119169515	Cpgi12118 484 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A
rs228867037 MGI SNP Detail	Chr2:119169575	Cpgi12118 544 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs227028331 MGI SNP Detail	Chr2:119169659	Cpgi12118 628 bp distal	SNP	C/T																																T																		C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs386956777 MGI SNP Detail	Chr2:119169791	Cpgi12118 760 bp distal	SNP	A/G		G			A	G	A	A	A	G			G	A	A	A	A	A	A	G	A		G	A	A	A	G	A	A	A	G	A		A	A		A	G	G		A		A	G	G	A	G	A	G	A	A	G	G		G
rs27423727 MGI SNP Detail	Chr2:119169812	Cpgi12118 781 bp distal	SNP	A/G		G			G			G		G			G								G					G				A		A				G				G		A								G				G
rs231528034 MGI SNP Detail	Chr2:119169884	Cpgi12118 853 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs27423726 MGI SNP Detail	Chr2:119169903	Cpgi12118 872 bp distal	SNP	A/C		C			C			C		C			C								C					C	C			A					C	C				C		A												C
rs250433465 MGI SNP Detail	Chr2:119169915	Cpgi12118 884 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs45708506 MGI SNP Detail	Chr2:119169937	Cpgi12118 906 bp distal	SNP	A/T	T	T	T		T	T	A	T	T	T	T	T	T	A	A	A	A	A	A	T	T	T	T	A	T	T	T	T	A	A	T	A	T	T	T	T	T	T	T	T	T		A	T	T	T	T	T	T	T	A	T	T	T	T
rs46265470 MGI SNP Detail	Chr2:119169945	Cpgi12118 914 bp distal	SNP	A/G	A	A	A		A	A	G	A	A	A	A	A	A	G	G	G	G	G	G	A	A	A	A	G	A	A	A	A	G	G	A	G	A	A	A	A	A	A	A	A	A		G	A	A	A	A	A	A	A	A	A	A	A	A
rs27423725 MGI SNP Detail	Chr2:119169974	Cpgi12118 943 bp distal	SNP	G/T		T			G	G		G		T			T													G	G			G					G	T				T		G												G
rs216650906 MGI SNP Detail	Chr2:119169983	Cpgi12118 952 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs230538909 MGI SNP Detail	Chr2:119170016	Cpgi12118 985 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs581417627 MGI SNP Detail	Chr2:119170077	Cpgi12118 1046 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs51587158 MGI SNP Detail	Chr2:119170133	Cpgi12118 1102 bp distal	SNP	A/C				A	A																					A						C																		A
rs49643748 MGI SNP Detail	Chr2:119170150	Cpgi12118 1119 bp distal	SNP	C/T				T	T																					T						C																		T
rs27423724 MGI SNP Detail	Chr2:119170175	Cpgi12118 1144 bp distal	SNP	C/G		C		C	C	C		C		C			C								C					C	C			G		G				C				C		G								C				C
rs257242135 MGI SNP Detail	Chr2:119170473	Cpgi12118 1442 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs27423723 MGI SNP Detail	Chr2:119170497	Cpgi12118 1466 bp distal	SNP	A/T				T	T	T		T		T			T													T	T			A		A								T		A								T				T
rs239285896 MGI SNP Detail	Chr2:119170551	Cpgi12118 1520 bp distal	SNP	A/C/T	C	C			C	A	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	A	T	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C	C	C		T	A	C	C	C	C	A	C	C	A	A	C	C
rs27423722 MGI SNP Detail	Chr2:119170623	Cpgi12118 1592 bp distal	SNP	A/C					A	A				A			A								A					A	A			C		C			A					A		C								A				A
rs249262127 MGI SNP Detail	Chr2:119170659	Cpgi12118 1628 bp distal	SNP	A/G																																G																		A
rs242585292 MGI SNP Detail	Chr2:119170924	Cpgi12118 1893 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs264752153 MGI SNP Detail	Chr2:119170943	Cpgi12118 1912 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs212123436 MGI SNP Detail	Chr2:119170962	Cpgi12118 1931 bp distal	SNP	C/T																																T																		C
rs255663569 MGI SNP Detail	Chr2:119170968	Cpgi12118 1937 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs240168630 MGI SNP Detail	Chr2:119171019	Cpgi12118 1988 bp distal	SNP	G/T																																T																		G

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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