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Mouse SNP Summary
Symbol
Name
ID 		Cpgi12435
CpG island 12435
MGI:5677521

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Showing SNP(s) 1 - 63 of 63

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225920028
MGI SNP Detail		 Chr2:151921596 AA387200 within coordinates of
Cpgi12435 1829 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230476909
MGI SNP Detail		 Chr2:151921608 AA387200 within coordinates of
Cpgi12435 1817 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247878728
MGI SNP Detail		 Chr2:151921674 AA387200 within coordinates of
Cpgi12435 1751 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C C C C T C T C T T C T T C T T T T T T
rs219757687
MGI SNP Detail		 Chr2:151921712 AA387200 within coordinates of
Cpgi12435 1713 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A A A A G A G A G G A G G A G G G G G G
rs237971784
MGI SNP Detail		 Chr2:151921820 AA387200 within coordinates of
Cpgi12435 1605 bp proximal
Rr567274 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265806498
MGI SNP Detail		 Chr2:151922048 AA387200 within coordinates of
Cpgi12435 1377 bp proximal
Rr567274 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs224512248
MGI SNP Detail		 Chr2:151922082 AA387200 within coordinates of
Cpgi12435 1343 bp proximal
Rr567274 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C C C C G C G C G G C G G C G G G G G G
rs251732355
MGI SNP Detail		 Chr2:151922243 AA387200 within coordinates of
Cpgi12435 1182 bp proximal
Rr567274 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264140788
MGI SNP Detail		 Chr2:151922308 AA387200 within coordinates of
Cpgi12435 1117 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225148164
MGI SNP Detail		 Chr2:151922467 AA387200 within coordinates of
Cpgi12435 958 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A A A A G A G A G G A G G A G G G G G G
rs243663013
MGI SNP Detail		 Chr2:151922470 AA387200 within coordinates of
Cpgi12435 955 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258422218
MGI SNP Detail		 Chr2:151922492 AA387200 within coordinates of
Cpgi12435 933 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225824075
MGI SNP Detail		 Chr2:151922596 AA387200 within coordinates of
Cpgi12435 829 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs250709367
MGI SNP Detail		 Chr2:151922600 AA387200 within coordinates of
Cpgi12435 825 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T T T T G T G T G G T G G T G T G G G G
rs217121107
MGI SNP Detail		 Chr2:151922686 AA387200 within coordinates of
Cpgi12435 739 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237790507
MGI SNP Detail		 Chr2:151922697 AA387200 within coordinates of
Cpgi12435 728 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T T T T C T C T C C T C C T C C C C C C
rs239961220
MGI SNP Detail		 Chr2:151922832 AA387200 within coordinates of
Cpgi12434 within coordinates of
Cpgi12435 593 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP A/G A G
rs260034812
MGI SNP Detail		 Chr2:151922915 AA387200 within coordinates of
Cpgi12434 within coordinates of
Cpgi12435 510 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T G G G G T G T G T T G T T G T G T T T T
rs584675764
MGI SNP Detail		 Chr2:151923109 AA387200 within coordinates of
Cpgi12435 316 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582021507
MGI SNP Detail		 Chr2:151923114 AA387200 within coordinates of
Cpgi12435 311 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216511314
MGI SNP Detail		 Chr2:151923117 AA387200 within coordinates of
Cpgi12435 308 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C T C C C C C C C
rs230530918
MGI SNP Detail		 Chr2:151923151 AA387200 within coordinates of
Cpgi12435 274 bp proximal
Gm75114 within coordinates of
Rr567275 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247928889
MGI SNP Detail		 Chr2:151923552 Cpgi12435 within coordinates of
Rr567277 within coordinates of
Tssr20759 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259883336
MGI SNP Detail		 Chr2:151923743 Cpgi12435 within coordinates of
Rr567277 within coordinates of
Scrt2 within coordinates of
Tssr20760 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A C A A A C A A A A C C C A A C A A C A A C A C A A A
rs582742131
MGI SNP Detail		 Chr2:151923775 Cpgi12435 within coordinates of
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C T C C C C C C C C C C C T C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224671178
MGI SNP Detail		 Chr2:151924030 Cpgi12435 within coordinates of
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C C C C T C T C T T C T T C T C T T T T
rs248702706
MGI SNP Detail		 Chr2:151924135 Cpgi12435 within coordinates of
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs263934305
MGI SNP Detail		 Chr2:151924379 Cpgi12435 within coordinates of
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T T T T A T A T A A T A A T A A A A A A
rs219084576
MGI SNP Detail		 Chr2:151924387 Cpgi12435 within coordinates of
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237439477
MGI SNP Detail		 Chr2:151924410 Cpgi12435 within coordinates of
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs258481635
MGI SNP Detail		 Chr2:151924494 Cpgi12435 within coordinates of
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A A A A G A G A G G A G G A G G G G G G
rs225894629
MGI SNP Detail		 Chr2:151924558 Cpgi12435 within coordinates of
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T T T T C T C T C C T C C T C C C C C C
rs249188638
MGI SNP Detail		 Chr2:151924662 Cpgi12435 71 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263195013
MGI SNP Detail		 Chr2:151924682 Cpgi12435 91 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232099814
MGI SNP Detail		 Chr2:151924734 Cpgi12435 143 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs586320386
MGI SNP Detail		 Chr2:151924754 Cpgi12435 163 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254661985
MGI SNP Detail		 Chr2:151924829 Cpgi12435 238 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T T T T C T C T C C T C C T C C C C C C
rs216572868
MGI SNP Detail		 Chr2:151924855 Cpgi12435 264 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G G G G A G A G A A G A A G A G A A A A
rs224201226
MGI SNP Detail		 Chr2:151924891 Cpgi12435 300 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242147582
MGI SNP Detail		 Chr2:151924988 Cpgi12435 397 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214173031
MGI SNP Detail		 Chr2:151924989 Cpgi12435 398 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235924732
MGI SNP Detail		 Chr2:151924991 Cpgi12435 400 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263168660
MGI SNP Detail		 Chr2:151925070 Cpgi12435 479 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33317848
MGI SNP Detail		 Chr2:151925201 Cpgi12435 610 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP A/T A A T T T A T
rs243522667
MGI SNP Detail		 Chr2:151925361 Cpgi12435 770 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254808571
MGI SNP Detail		 Chr2:151925463 Cpgi12435 872 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224753173
MGI SNP Detail		 Chr2:151925488 Cpgi12435 897 bp distal
Rr567277 within coordinates of
Scrt2 within coordinates of
 SNP A/G A G
rs237519991
MGI SNP Detail		 Chr2:151925514 Cpgi12435 923 bp distal
Scrt2 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252260666
MGI SNP Detail		 Chr2:151925534 Cpgi12435 943 bp distal
Scrt2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239630034
MGI SNP Detail		 Chr2:151925609 Cpgi12435 1018 bp distal
Scrt2 within coordinates of
 SNP A/G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219722403
MGI SNP Detail		 Chr2:151925684 Cpgi12435 1093 bp distal
Scrt2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580248953
MGI SNP Detail		 Chr2:151925762 Cpgi12435 1171 bp distal
Scrt2 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs246574607
MGI SNP Detail		 Chr2:151925936 Cpgi12435 1345 bp distal
Scrt2 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs251797312
MGI SNP Detail		 Chr2:151925939 Cpgi12435 1348 bp distal
Scrt2 within coordinates of
 SNP C/G C G
rs29672348
MGI SNP Detail		 Chr2:151925945 Cpgi12435 1354 bp distal
Scrt2 within coordinates of
 SNP A/C C A A A
rs50627763
MGI SNP Detail		 Chr2:151925961 Cpgi12435 1370 bp distal
Scrt2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G G G G A G A G A A G A A G A A A A A A
rs251317002
MGI SNP Detail		 Chr2:151926107 Cpgi12435 1516 bp distal
Scrt2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258975516
MGI SNP Detail		 Chr2:151926248 Cpgi12435 1657 bp distal
Rr567278 within coordinates of
Scrt2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224266229
MGI SNP Detail		 Chr2:151926250 Cpgi12435 1659 bp distal
Rr567278 within coordinates of
Scrt2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33594719
MGI SNP Detail		 Chr2:151926306 Cpgi12435 1715 bp distal
Rr567278 within coordinates of
Scrt2 within coordinates of
 SNP A/G G A A A G A
rs239198838
MGI SNP Detail		 Chr2:151926360 Cpgi12435 1769 bp distal
Rr567278 within coordinates of
Scrt2 within coordinates of
 SNP C/T T C
rs52078357
MGI SNP Detail		 Chr2:151926504 Cpgi12435 1913 bp distal
Rr567278 within coordinates of
Scrt2 within coordinates of
 SNP A/G A G A G
rs229966001
MGI SNP Detail		 Chr2:151926535 Cpgi12435 1944 bp distal
Rr567278 within coordinates of
Scrt2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 63 of 63
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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