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Mouse SNP Summary
Symbol
Name
ID 		Cpgi13947
CpG island 13947
MGI:5679031

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225621653
MGI SNP Detail		 Chr3:152043464 Cpgi13947 1934 bp proximal
Miga1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240788908
MGI SNP Detail		 Chr3:152043483 Cpgi13947 1915 bp proximal
Miga1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs252575737
MGI SNP Detail		 Chr3:152043650 Cpgi13947 1748 bp proximal
Miga1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs220001872
MGI SNP Detail		 Chr3:152043794 Cpgi13947 1604 bp proximal
Miga1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C
rs238507777
MGI SNP Detail		 Chr3:152043800 Cpgi13947 1598 bp proximal
Miga1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257154069
MGI SNP Detail		 Chr3:152043821 Cpgi13947 1577 bp proximal
Miga1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs220491991
MGI SNP Detail		 Chr3:152043843 Cpgi13947 1555 bp proximal
Miga1 within coordinates of
 SNP A/G/T G G G G G G G G G G G G G G G G G G G T G G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G
rs248653445
MGI SNP Detail		 Chr3:152043872 Cpgi13947 1526 bp proximal
Miga1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T T T T T T T T T A T T T T
rs48310957
MGI SNP Detail		 Chr3:152043920 Cpgi13947 1478 bp proximal
Miga1 within coordinates of
 SNP C/T C T C
rs232634536
MGI SNP Detail		 Chr3:152043931 Cpgi13947 1467 bp proximal
Miga1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257512814
MGI SNP Detail		 Chr3:152043947 Cpgi13947 1451 bp proximal
Miga1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256492409
MGI SNP Detail		 Chr3:152043954 Cpgi13947 1444 bp proximal
Miga1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C C C C C C C C C A C C C C
rs225397484
MGI SNP Detail		 Chr3:152043956 Cpgi13947 1442 bp proximal
Miga1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583157871
MGI SNP Detail		 Chr3:152043968 Cpgi13947 1430 bp proximal
Miga1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C C C C C C C C C G C C C C
rs587062370
MGI SNP Detail		 Chr3:152043988 Cpgi13947 1410 bp proximal
Miga1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243120129
MGI SNP Detail		 Chr3:152044028 Cpgi13947 1370 bp proximal
Miga1 within coordinates of
Rr66408 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212872711
MGI SNP Detail		 Chr3:152044040 Cpgi13947 1358 bp proximal
Miga1 within coordinates of
Rr66408 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236244450
MGI SNP Detail		 Chr3:152044041 Cpgi13947 1357 bp proximal
Miga1 within coordinates of
Rr66408 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254685855
MGI SNP Detail		 Chr3:152044044 Cpgi13947 1354 bp proximal
Miga1 within coordinates of
Rr66408 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217999120
MGI SNP Detail		 Chr3:152044062 Cpgi13947 1336 bp proximal
Miga1 within coordinates of
Rr66408 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs238538826
MGI SNP Detail		 Chr3:152044153 Cpgi13947 1245 bp proximal
Miga1 within coordinates of
Rr66408 within coordinates of
 SNP C/T C C C T T C C C T C C T T T T T T T C T C T T C T C T C T T C T T T C T T T T C C T C C T C C
rs46847749
MGI SNP Detail		 Chr3:152044155 Cpgi13947 1243 bp proximal
Miga1 within coordinates of
Rr66408 within coordinates of
 SNP G G G
rs580675848
MGI SNP Detail		 Chr3:152044176 Cpgi13947 1222 bp proximal
Miga1 within coordinates of
Rr66408 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs583166869
MGI SNP Detail		 Chr3:152044309 Cpgi13947 1089 bp proximal
Miga1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587352632
MGI SNP Detail		 Chr3:152044342 Cpgi13947 1056 bp proximal
Miga1 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs581770449
MGI SNP Detail		 Chr3:152044347 Cpgi13947 1051 bp proximal
Miga1 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585221304
MGI SNP Detail		 Chr3:152044348 Cpgi13947 1050 bp proximal
Miga1 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578921245
MGI SNP Detail		 Chr3:152044351 Cpgi13947 1047 bp proximal
Miga1 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs581424802
MGI SNP Detail		 Chr3:152044355 Cpgi13947 1043 bp proximal
Miga1 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs220034636
MGI SNP Detail		 Chr3:152044465 Cpgi13947 933 bp proximal
Miga1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs231275935
MGI SNP Detail		 Chr3:152044472 Cpgi13947 926 bp proximal
Miga1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250067076
MGI SNP Detail		 Chr3:152044478 Cpgi13947 920 bp proximal
Miga1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs219904951
MGI SNP Detail		 Chr3:152044488 Cpgi13947 910 bp proximal
Miga1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251941124
MGI SNP Detail		 Chr3:152044534 Cpgi13947 864 bp proximal
Miga1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264199735
MGI SNP Detail		 Chr3:152044538 Cpgi13947 860 bp proximal
Miga1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs225574323
MGI SNP Detail		 Chr3:152044548 Cpgi13947 850 bp proximal
Miga1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239471124
MGI SNP Detail		 Chr3:152044568 Cpgi13947 830 bp proximal
Miga1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49854774
MGI SNP Detail		 Chr3:152044579 Cpgi13947 819 bp proximal
Miga1 within coordinates of
 SNP C/T C C T T C
rs225446450
MGI SNP Detail		 Chr3:152044713 Cpgi13947 685 bp proximal
Miga1 within coordinates of
 SNP A/C/T T T T T T T T T T T T T T T T T T T T A T T C T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T
rs243225501
MGI SNP Detail		 Chr3:152044738 Cpgi13947 660 bp proximal
Miga1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs264683696
MGI SNP Detail		 Chr3:152044798 Cpgi13947 600 bp proximal
Miga1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs233919759
MGI SNP Detail		 Chr3:152044815 Cpgi13947 583 bp proximal
Miga1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260202147
MGI SNP Detail		 Chr3:152044824 Cpgi13947 574 bp proximal
Miga1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217923361
MGI SNP Detail		 Chr3:152044868 Cpgi13947 530 bp proximal
Miga1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A
rs232958389
MGI SNP Detail		 Chr3:152044895 Cpgi13947 503 bp proximal
Miga1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G G A G G G
rs246299026
MGI SNP Detail		 Chr3:152044969 Cpgi13947 429 bp proximal
Miga1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs107829807
MGI SNP Detail		 Chr3:152045071 Cpgi13947 327 bp proximal
Miga1 within coordinates of
 SNP A/G A G G A
rs231476131
MGI SNP Detail		 Chr3:152045273 Cpgi13947 125 bp proximal
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs250200328
MGI SNP Detail		 Chr3:152045274 Cpgi13947 124 bp proximal
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211817118
MGI SNP Detail		 Chr3:152045280 Cpgi13947 118 bp proximal
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239967038
MGI SNP Detail		 Chr3:152045316 Cpgi13947 82 bp proximal
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs578707262
MGI SNP Detail		 Chr3:152045328 Cpgi13947 70 bp proximal
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263988370
MGI SNP Detail		 Chr3:152045364 Cpgi13947 34 bp proximal
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225307827
MGI SNP Detail		 Chr3:152045471 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239507578
MGI SNP Detail		 Chr3:152045500 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250784051
MGI SNP Detail		 Chr3:152045501 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219600033
MGI SNP Detail		 Chr3:152045516 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs236901166
MGI SNP Detail		 Chr3:152045659 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C C C C C C C C C G C C C C
rs261616680
MGI SNP Detail		 Chr3:152045764 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235062550
MGI SNP Detail		 Chr3:152045797 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265918111
MGI SNP Detail		 Chr3:152045893 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31509986
MGI SNP Detail		 Chr3:152045904 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP G/T G G T T
rs246432640
MGI SNP Detail		 Chr3:152045915 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214326824
MGI SNP Detail		 Chr3:152045958 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs225616571
MGI SNP Detail		 Chr3:152046004 Cpgi13947 within coordinates of
Miga1 within coordinates of
Rr77386 within coordinates of
Tssr36215 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T
rs253888970
MGI SNP Detail		 Chr3:152046190 Cpgi13947 within coordinates of
Rr77386 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46565440
MGI SNP Detail		 Chr3:152046242 Cpgi13947 within coordinates of
Rr77386 within coordinates of
 SNP A/G A G G A
rs242693935
MGI SNP Detail		 Chr3:152046271 Cpgi13947 within coordinates of
Rr77386 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs584405651
MGI SNP Detail		 Chr3:152046274 Cpgi13947 within coordinates of
Rr77386 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259894210
MGI SNP Detail		 Chr3:152046312 Cpgi13947 20 bp distal
Rr77386 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A G A
rs216765807
MGI SNP Detail		 Chr3:152046334 Cpgi13947 42 bp distal
Rr77386 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C
rs233231972
MGI SNP Detail		 Chr3:152046336 Cpgi13947 44 bp distal
Rr77386 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs250822137
MGI SNP Detail		 Chr3:152046350 Cpgi13947 58 bp distal
Rr77386 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219633720
MGI SNP Detail		 Chr3:152046374 Cpgi13947 82 bp distal
Rr77386 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs236937016
MGI SNP Detail		 Chr3:152046376 Cpgi13947 84 bp distal
Rr77386 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261049749
MGI SNP Detail		 Chr3:152046385 Cpgi13947 93 bp distal
Rr77386 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263386183
MGI SNP Detail		 Chr3:152046412 Cpgi13947 120 bp distal
 SNP C/T C T
rs250273595
MGI SNP Detail		 Chr3:152046414 Cpgi13947 122 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs263628982
MGI SNP Detail		 Chr3:152046428 Cpgi13947 136 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227413380
MGI SNP Detail		 Chr3:152046606 Cpgi13947 314 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs240530311
MGI SNP Detail		 Chr3:152046627 Cpgi13947 335 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs258299772
MGI SNP Detail		 Chr3:152046639 Cpgi13947 347 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225655070
MGI SNP Detail		 Chr3:152046710 Cpgi13947 418 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249738755
MGI SNP Detail		 Chr3:152046726 Cpgi13947 434 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs264548696
MGI SNP Detail		 Chr3:152046928 Cpgi13947 636 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233617831
MGI SNP Detail		 Chr3:152046932 Cpgi13947 640 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258951692
MGI SNP Detail		 Chr3:152046935 Cpgi13947 643 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215645270
MGI SNP Detail		 Chr3:152046944 Cpgi13947 652 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs579226387
MGI SNP Detail		 Chr3:152046998 Cpgi13947 706 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582580406
MGI SNP Detail		 Chr3:152047034 Cpgi13947 742 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A G A
rs49926461
MGI SNP Detail		 Chr3:152047087 Cpgi13947 795 bp distal
 SNP A/G G G A A G
rs230962064
MGI SNP Detail		 Chr3:152047099 Cpgi13947 807 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255716214
MGI SNP Detail		 Chr3:152047122 Cpgi13947 830 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs227488125
MGI SNP Detail		 Chr3:152047166 Cpgi13947 874 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs239722444
MGI SNP Detail		 Chr3:152047277 Cpgi13947 985 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A
rs263444844
MGI SNP Detail		 Chr3:152047294 Cpgi13947 1002 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586442072
MGI SNP Detail		 Chr3:152047377 Cpgi13947 1085 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs580080251
MGI SNP Detail		 Chr3:152047455 Cpgi13947 1163 bp distal
 SNP C/T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs30998115
MGI SNP Detail		 Chr3:152047532 Cpgi13947 1240 bp distal
 SNP A/G G G A A G
rs239754380
MGI SNP Detail		 Chr3:152047534 Cpgi13947 1242 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 100 of 117
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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