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Mouse SNP Summary
Symbol
Name
ID 		Cpgi14586
CpG island 14586
MGI:5679666

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235045510
MGI SNP Detail		 Chr4:110007765 Cpgi14586 1951 bp proximal
 SNP C/T T C
rs242594214
MGI SNP Detail		 Chr4:110007914 Cpgi14586 1802 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253555940
MGI SNP Detail		 Chr4:110007954 Cpgi14586 1762 bp proximal
 SNP C/T C T
rs259937136
MGI SNP Detail		 Chr4:110007997 Cpgi14586 1719 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212886883
MGI SNP Detail		 Chr4:110008003 Cpgi14586 1713 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs229736721
MGI SNP Detail		 Chr4:110008130 Cpgi14586 1586 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs251748230
MGI SNP Detail		 Chr4:110008218 Cpgi14586 1498 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221742669
MGI SNP Detail		 Chr4:110008375 Cpgi14586 1341 bp proximal
 SNP C/T T C
rs234612568
MGI SNP Detail		 Chr4:110008522 Cpgi14586 1194 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252739484
MGI SNP Detail		 Chr4:110008527 Cpgi14586 1189 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs226674331
MGI SNP Detail		 Chr4:110008569 Cpgi14586 1147 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239717259
MGI SNP Detail		 Chr4:110008701 Cpgi14586 1015 bp proximal
 SNP G/T T G
rs250991848
MGI SNP Detail		 Chr4:110008702 Cpgi14586 1014 bp proximal
 SNP C/T T C
rs220162821
MGI SNP Detail		 Chr4:110008712 Cpgi14586 1004 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs238467078
MGI SNP Detail		 Chr4:110008716 Cpgi14586 1000 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255542652
MGI SNP Detail		 Chr4:110008723 Cpgi14586 993 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs227741686
MGI SNP Detail		 Chr4:110008855 Cpgi14586 861 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245506623
MGI SNP Detail		 Chr4:110008926 Cpgi14586 790 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T
rs266227914
MGI SNP Detail		 Chr4:110008979 Cpgi14586 737 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs223136719
MGI SNP Detail		 Chr4:110009045 Cpgi14586 671 bp proximal
 SNP C/T T C
rs233445900
MGI SNP Detail		 Chr4:110009061 Cpgi14586 655 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254736946
MGI SNP Detail		 Chr4:110009114 Cpgi14586 602 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212411420
MGI SNP Detail		 Chr4:110009117 Cpgi14586 599 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245760098
MGI SNP Detail		 Chr4:110009208 Cpgi14586 508 bp proximal
 SNP C/T T C
rs27485070
MGI SNP Detail		 Chr4:110009220 Cpgi14586 496 bp proximal
 SNP C/T T T T T T T T T T C T T C C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219994736
MGI SNP Detail		 Chr4:110009269 Cpgi14586 447 bp proximal
 SNP C/T T C
rs27485069
MGI SNP Detail		 Chr4:110009290 Cpgi14586 426 bp proximal
 SNP C/T T T T T T T C T C C T
rs585914119
MGI SNP Detail		 Chr4:110009326 Cpgi14586 390 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27485068
MGI SNP Detail		 Chr4:110009371 Cpgi14586 345 bp proximal
 SNP A/G G G G G G G G G G A G G A A
rs227042057
MGI SNP Detail		 Chr4:110009372 Cpgi14586 344 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228572836
MGI SNP Detail		 Chr4:110009426 Cpgi14586 290 bp proximal
Rr84118 within coordinates of
 SNP A/G A G
rs247326181
MGI SNP Detail		 Chr4:110009429 Cpgi14586 287 bp proximal
Rr84118 within coordinates of
 SNP A/G G A
rs217944433
MGI SNP Detail		 Chr4:110009462 Cpgi14586 254 bp proximal
Rr84118 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G
rs238399725
MGI SNP Detail		 Chr4:110009463 Cpgi14586 253 bp proximal
Rr84118 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255530289
MGI SNP Detail		 Chr4:110009566 Cpgi14586 150 bp proximal
Rr84118 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27485067
MGI SNP Detail		 Chr4:110009576 Cpgi14586 140 bp proximal
Rr84118 within coordinates of
 SNP A/G A A A A A A A A A A G A A G G A
rs27485066
MGI SNP Detail		 Chr4:110009737 Cpgi14586 within coordinates of
 SNP C/T C C C C C C C C C T C C T T
rs27485065
MGI SNP Detail		 Chr4:110009849 Cpgi14586 within coordinates of
 SNP A/G G G G G G G G G G G G A G G A A G
rs234368813
MGI SNP Detail		 Chr4:110010036 Cpgi14586 54 bp distal
Gm33070 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213101814
MGI SNP Detail		 Chr4:110010119 Cpgi14586 137 bp distal
Gm33070 within coordinates of
 SNP C/T C T
rs236631615
MGI SNP Detail		 Chr4:110010124 Cpgi14586 142 bp distal
Gm33070 within coordinates of
 SNP C/T C T
rs27485064
MGI SNP Detail		 Chr4:110010199 Cpgi14586 217 bp distal
Gm33070 within coordinates of
 SNP A/G G G G G G G A G G G G A G G A A G
rs27485063
MGI SNP Detail		 Chr4:110010240 Cpgi14586 258 bp distal
Gm33070 within coordinates of
 SNP C/T C C C C C C C C C C C T C C T T C
rs27485062
MGI SNP Detail		 Chr4:110010279 Cpgi14586 297 bp distal
Gm33070 within coordinates of
 SNP A/T T T T T T T T T T T T T T A T
rs27485061
MGI SNP Detail		 Chr4:110010317 Cpgi14586 335 bp distal
Gm33070 within coordinates of
 SNP C/T T T T T T T T T T T T T T T C
rs27485060
MGI SNP Detail		 Chr4:110010351 Cpgi14586 369 bp distal
Gm33070 within coordinates of
 SNP C/T C C C C C C C C C C C T C C T T C
rs218900228
MGI SNP Detail		 Chr4:110010381 Cpgi14586 399 bp distal
Gm33070 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27485059
MGI SNP Detail		 Chr4:110010449 Cpgi14586 467 bp distal
Gm33070 within coordinates of
 SNP G/T T T T T T T T T T T T G T T G G T
rs27485058
MGI SNP Detail		 Chr4:110010466 Cpgi14586 484 bp distal
Gm33070 within coordinates of
 SNP A/C A A A A A A A A A A A C A A C C A
rs212029176
MGI SNP Detail		 Chr4:110010498 Cpgi14586 516 bp distal
Gm33070 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27485057
MGI SNP Detail		 Chr4:110010519 Cpgi14586 537 bp distal
Gm33070 within coordinates of
 SNP C/T T T T T T T C T T T T C T T C C T
rs27485056
MGI SNP Detail		 Chr4:110010588 Cpgi14586 606 bp distal
Gm33070 within coordinates of
 SNP A/C A A A A A A C A A A A A A A A
rs221507713
MGI SNP Detail		 Chr4:110010759 Cpgi14586 777 bp distal
Gm33070 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27485055
MGI SNP Detail		 Chr4:110010800 Cpgi14586 818 bp distal
Gm33070 within coordinates of
 SNP G/T T T T T T T G T T T T G T T G G G
rs264302259
MGI SNP Detail		 Chr4:110010834 Cpgi14586 852 bp distal
Gm33070 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs225957991
MGI SNP Detail		 Chr4:110010884 Cpgi14586 902 bp distal
Gm33070 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245338814
MGI SNP Detail		 Chr4:110010917 Cpgi14586 935 bp distal
Gm33070 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27485054
MGI SNP Detail		 Chr4:110010926 Cpgi14586 944 bp distal
Gm33070 within coordinates of
 SNP A/G A A A A A A G A A A A A A A A
rs226927549
MGI SNP Detail		 Chr4:110010948 Cpgi14586 966 bp distal
Gm33070 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239318845
MGI SNP Detail		 Chr4:110010961 Cpgi14586 979 bp distal
Gm33070 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs260305928
MGI SNP Detail		 Chr4:110010975 Cpgi14586 993 bp distal
Gm33070 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227797846
MGI SNP Detail		 Chr4:110010983 Cpgi14586 1001 bp distal
Gm33070 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27485053
MGI SNP Detail		 Chr4:110010990 Cpgi14586 1008 bp distal
Gm33070 within coordinates of
 SNP A/G A A A A A A A A A A A G A A G G A
rs218764361
MGI SNP Detail		 Chr4:110011099 Cpgi14586 1117 bp distal
Gm33070 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27485052
MGI SNP Detail		 Chr4:110011207 Cpgi14586 1225 bp distal
Gm33070 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs27485051
MGI SNP Detail		 Chr4:110011262 Cpgi14586 1280 bp distal
Gm33070 within coordinates of
 SNP C/G C C C C C C G C C C C C C C C
rs211968298
MGI SNP Detail		 Chr4:110011431 Cpgi14586 1449 bp distal
Gm33070 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232095516
MGI SNP Detail		 Chr4:110011433 Cpgi14586 1451 bp distal
Gm33070 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242662537
MGI SNP Detail		 Chr4:110011495 Cpgi14586 1513 bp distal
Gm33070 within coordinates of
 SNP A/C A C
rs215922504
MGI SNP Detail		 Chr4:110011500 Cpgi14586 1518 bp distal
Gm33070 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27485050
MGI SNP Detail		 Chr4:110011511 Cpgi14586 1529 bp distal
Gm33070 within coordinates of
 SNP C/G C C C C C C C C C C G C C G C
rs260975582
MGI SNP Detail		 Chr4:110011561 Cpgi14586 1579 bp distal
Gm33070 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226388627
MGI SNP Detail		 Chr4:110011717 Cpgi14586 1735 bp distal
Gm33070 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242423921
MGI SNP Detail		 Chr4:110011913 Cpgi14586 1931 bp distal
Gm33070 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249879134
MGI SNP Detail		 Chr4:110011923 Cpgi14586 1941 bp distal
Gm33070 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220511141
MGI SNP Detail		 Chr4:110011940 Cpgi14586 1958 bp distal
Gm33070 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27485049
MGI SNP Detail		 Chr4:110011977 Cpgi14586 1995 bp distal
Gm33070 within coordinates of
 SNP A/C A A A A A A C A A A A C A A C C C
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Showing SNP(s) 1 - 77 of 77
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory