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Mouse SNP Summary
Symbol
Name
ID 		Cpgi15234
CpG island 15234
MGI:5680314

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Showing SNP(s) 1 - 69 of 69

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs52450030
MGI SNP Detail		 Chr4:141262761 Cpgi15234 1969 bp proximal
Spen within coordinates of
 SNP A A A A
rs579194155
MGI SNP Detail		 Chr4:141262763 Cpgi15234 1967 bp proximal
Spen within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs47719812
MGI SNP Detail		 Chr4:141262969 Cpgi15234 1761 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP A A A
rs256075875
MGI SNP Detail		 Chr4:141263039 Cpgi15234 1691 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP A/G G G G A A A A A G A A A A A A A A A A A A A A A A A G A A G A G A A A A A A A A A A A A A A A A A A A A A
rs49236392
MGI SNP Detail		 Chr4:141263080 Cpgi15234 1650 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP C C C
rs47422301
MGI SNP Detail		 Chr4:141263083 Cpgi15234 1647 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP C C C
rs46840479
MGI SNP Detail		 Chr4:141263095 Cpgi15234 1635 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP C C C
rs49029419
MGI SNP Detail		 Chr4:141263140 Cpgi15234 1590 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP G G G
rs46233458
MGI SNP Detail		 Chr4:141263168 Cpgi15234 1562 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP T T T
rs250066898
MGI SNP Detail		 Chr4:141263218 Cpgi15234 1512 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs48386438
MGI SNP Detail		 Chr4:141263257 Cpgi15234 1473 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP C/T C T
rs49477561
MGI SNP Detail		 Chr4:141263291 Cpgi15234 1439 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP G G G
rs31921685
MGI SNP Detail		 Chr4:141263617 Cpgi15233 within coordinates of
Cpgi15234 1113 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP G/T G T G G G
rs226357356
MGI SNP Detail		 Chr4:141263684 Cpgi15233 within coordinates of
Cpgi15234 1046 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs32538108
MGI SNP Detail		 Chr4:141264025 Cpgi15233 within coordinates of
Cpgi15234 705 bp proximal
Gm4123 within coordinates of
Spen within coordinates of
 SNP A/G A G G G
rs107847481
MGI SNP Detail		 Chr4:141264080 Cpgi15233 within coordinates of
Cpgi15234 650 bp proximal
Gm4123 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP C C C C
rs3659888
MGI SNP Detail		 Chr4:141264222 Cpgi15233 within coordinates of
Cpgi15234 508 bp proximal
Gm4123 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP C/T T C
rs245020060
MGI SNP Detail		 Chr4:141264243 Cpgi15233 within coordinates of
Cpgi15234 487 bp proximal
Gm4123 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs51113698
MGI SNP Detail		 Chr4:141264312 Cpgi15233 within coordinates of
Cpgi15234 418 bp proximal
Gm4123 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP A A A
rs227316811
MGI SNP Detail		 Chr4:141264476 Cpgi15233 within coordinates of
Cpgi15234 254 bp proximal
Gm4123 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253512915
MGI SNP Detail		 Chr4:141264584 Cpgi15234 146 bp proximal
Gm4123 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217813216
MGI SNP Detail		 Chr4:141264602 Cpgi15234 128 bp proximal
Gm4123 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP A A A
rs242727837
MGI SNP Detail		 Chr4:141264628 Cpgi15234 102 bp proximal
Gm4123 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247715852
MGI SNP Detail		 Chr4:141264809 Cpgi15234 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215493300
MGI SNP Detail		 Chr4:141264860 Cpgi15234 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233810782
MGI SNP Detail		 Chr4:141264861 Cpgi15234 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243314942
MGI SNP Detail		 Chr4:141264878 Cpgi15234 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP C C C
rs223566830
MGI SNP Detail		 Chr4:141264889 Cpgi15234 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs253024143
MGI SNP Detail		 Chr4:141264894 Cpgi15234 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP A A A
rs581995455
MGI SNP Detail		 Chr4:141264945 Cpgi15234 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221952581
MGI SNP Detail		 Chr4:141264984 Cpgi15234 within coordinates of
Rr1207 within coordinates of
Spen within coordinates of
 SNP A/C A C
rs32179461
MGI SNP Detail		 Chr4:141265308 Cpgi15234 within coordinates of
Spen within coordinates of
 SNP A/G A G A A G
rs259297151
MGI SNP Detail		 Chr4:141265323 Cpgi15234 within coordinates of
Spen within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221726394
MGI SNP Detail		 Chr4:141265426 Cpgi15234 within coordinates of
Spen within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs238711628
MGI SNP Detail		 Chr4:141265871 Cpgi15234 within coordinates of
Rr603789 within coordinates of
Spen within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C
rs262771751
MGI SNP Detail		 Chr4:141265939 Cpgi15234 within coordinates of
Rr603789 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C
rs585132918
MGI SNP Detail		 Chr4:141266097 Cpgi15234 within coordinates of
Rr603789 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228079267
MGI SNP Detail		 Chr4:141266122 Cpgi15234 within coordinates of
Rr603789 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249565928
MGI SNP Detail		 Chr4:141266319 Cpgi15234 within coordinates of
Rr603789 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs265827174
MGI SNP Detail		 Chr4:141266325 Cpgi15234 within coordinates of
Rr603789 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs228927878
MGI SNP Detail		 Chr4:141266464 Cpgi15234 68 bp distal
Gm68462 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252417410
MGI SNP Detail		 Chr4:141266561 B830004H01Rik within coordinates of
Cpgi15234 165 bp distal
Gm68462 within coordinates of
 SNP G G G
rs215690190
MGI SNP Detail		 Chr4:141266642 B830004H01Rik within coordinates of
Cpgi15234 246 bp distal
Gm68462 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233830731
MGI SNP Detail		 Chr4:141266744 B830004H01Rik within coordinates of
Cpgi15234 348 bp distal
Gm68462 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs244059327
MGI SNP Detail		 Chr4:141266748 B830004H01Rik within coordinates of
Cpgi15234 352 bp distal
Gm68462 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215190367
MGI SNP Detail		 Chr4:141266869 B830004H01Rik within coordinates of
Cpgi15234 473 bp distal
Gm68462 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236663027
MGI SNP Detail		 Chr4:141266870 B830004H01Rik within coordinates of
Cpgi15234 474 bp distal
Gm68462 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256662644
MGI SNP Detail		 Chr4:141266877 B830004H01Rik within coordinates of
Cpgi15234 481 bp distal
Gm68462 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226328602
MGI SNP Detail		 Chr4:141266954 B830004H01Rik within coordinates of
Cpgi15234 558 bp distal
Gm68462 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236439090
MGI SNP Detail		 Chr4:141267020 B830004H01Rik within coordinates of
Cpgi15234 624 bp distal
Gm68462 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220511541
MGI SNP Detail		 Chr4:141267032 B830004H01Rik within coordinates of
Cpgi15234 636 bp distal
Gm68462 within coordinates of
 SNP T T T
rs222015216
MGI SNP Detail		 Chr4:141267059 B830004H01Rik within coordinates of
Cpgi15234 663 bp distal
Gm68462 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242589622
MGI SNP Detail		 Chr4:141267173 B830004H01Rik within coordinates of
Cpgi15234 777 bp distal
Gm68462 within coordinates of
 SNP C C C
rs262355951
MGI SNP Detail		 Chr4:141267242 B830004H01Rik within coordinates of
Cpgi15234 846 bp distal
Gm68462 within coordinates of
 SNP C/T T T T C T C C T T T T T T T T T T T C T T T C T T T T T T T T T T T T T T T T
rs579984406
MGI SNP Detail		 Chr4:141267330 B830004H01Rik within coordinates of
Cpgi15234 934 bp distal
Gm68462 within coordinates of
 SNP C/T T C T C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C
rs220391610
MGI SNP Detail		 Chr4:141267513 B830004H01Rik within coordinates of
Cpgi15234 1117 bp distal
Gm68462 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs245045843
MGI SNP Detail		 Chr4:141267547 B830004H01Rik within coordinates of
Cpgi15234 1151 bp distal
Gm68462 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264005619
MGI SNP Detail		 Chr4:141267583 B830004H01Rik within coordinates of
Cpgi15234 1187 bp distal
Gm68462 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228959673
MGI SNP Detail		 Chr4:141267715 B830004H01Rik within coordinates of
Cpgi15234 1319 bp distal
Gm68462 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238830656
MGI SNP Detail		 Chr4:141267716 B830004H01Rik within coordinates of
Cpgi15234 1320 bp distal
Gm68462 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs266006402
MGI SNP Detail		 Chr4:141267756 B830004H01Rik within coordinates of
Cpgi15234 1360 bp distal
Gm68462 within coordinates of
 SNP C C C
rs581938044
MGI SNP Detail		 Chr4:141267769 B830004H01Rik within coordinates of
Cpgi15234 1373 bp distal
Gm68462 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs586122032
MGI SNP Detail		 Chr4:141267785 B830004H01Rik within coordinates of
Cpgi15234 1389 bp distal
Gm68462 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580140065
MGI SNP Detail		 Chr4:141267833 B830004H01Rik within coordinates of
Cpgi15234 1437 bp distal
Gm68462 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs234121985
MGI SNP Detail		 Chr4:141267881 B830004H01Rik within coordinates of
Cpgi15234 1485 bp distal
Gm68462 within coordinates of
 SNP T T T
rs250989627
MGI SNP Detail		 Chr4:141267907 B830004H01Rik within coordinates of
Cpgi15234 1511 bp distal
Gm68462 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215550075
MGI SNP Detail		 Chr4:141268085 B830004H01Rik within coordinates of
Cpgi15234 1689 bp distal
Gm68462 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241384458
MGI SNP Detail		 Chr4:141268110 B830004H01Rik within coordinates of
Cpgi15234 1714 bp distal
Gm68462 within coordinates of
 SNP T T T
rs583663094
MGI SNP Detail		 Chr4:141268353 B830004H01Rik within coordinates of
Cpgi15234 1957 bp distal
Gm68462 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 69 of 69
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory