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Mouse SNP Summary
Symbol
Name
ID 		Cpgi16346
CpG island 16346
MGI:5681425

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Showing SNP(s) 1 - 96 of 96

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216477112
MGI SNP Detail		 Chr5:115115376 Cpgi16346 1933 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232837370
MGI SNP Detail		 Chr5:115115396 Cpgi16346 1913 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs250427760
MGI SNP Detail		 Chr5:115115404 Cpgi16346 1905 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs236332204
MGI SNP Detail		 Chr5:115115582 Cpgi16346 1727 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585987790
MGI SNP Detail		 Chr5:115115666 Cpgi16346 1643 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs583277072
MGI SNP Detail		 Chr5:115115667 Cpgi16346 1642 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs583005212
MGI SNP Detail		 Chr5:115115674 Cpgi16346 1635 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs586782677
MGI SNP Detail		 Chr5:115115678 Cpgi16346 1631 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs255319775
MGI SNP Detail		 Chr5:115115710 Cpgi16346 1599 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T A T T T T T T T T T T T
rs226868249
MGI SNP Detail		 Chr5:115115797 Cpgi16346 1512 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs248694666
MGI SNP Detail		 Chr5:115115840 Cpgi16346 1469 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C C C C C T C C C C
rs580271546
MGI SNP Detail		 Chr5:115115862 Cpgi16346 1447 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232600108
MGI SNP Detail		 Chr5:115115883 Cpgi16346 1426 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240904561
MGI SNP Detail		 Chr5:115115922 Cpgi16346 1387 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs29559488
MGI SNP Detail		 Chr5:115115947 Cpgi16346 1362 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G A G G G
rs225879374
MGI SNP Detail		 Chr5:115115993 Cpgi16346 1316 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs244340932
MGI SNP Detail		 Chr5:115116043 Cpgi16346 1266 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs212233874
MGI SNP Detail		 Chr5:115116062 Cpgi16346 1247 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs235155511
MGI SNP Detail		 Chr5:115116084 Cpgi16346 1225 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586713268
MGI SNP Detail		 Chr5:115116101 Cpgi16346 1208 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586761124
MGI SNP Detail		 Chr5:115116121 Cpgi16346 1188 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs254043352
MGI SNP Detail		 Chr5:115116156 Cpgi16346 1153 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs217026717
MGI SNP Detail		 Chr5:115116169 Cpgi16346 1140 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs232717436
MGI SNP Detail		 Chr5:115116260 Cpgi16346 1049 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250484530
MGI SNP Detail		 Chr5:115116321 Cpgi16346 988 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213603069
MGI SNP Detail		 Chr5:115116438 Cpgi16346 871 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230460963
MGI SNP Detail		 Chr5:115116472 Cpgi16346 837 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29540244
MGI SNP Detail		 Chr5:115116494 Cpgi16346 815 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C T T C
rs33202145
MGI SNP Detail		 Chr5:115116510 Cpgi16346 799 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G A A G
rs249873531
MGI SNP Detail		 Chr5:115116554 Cpgi16346 755 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs32144200
MGI SNP Detail		 Chr5:115116579 Cpgi16346 730 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs222158440
MGI SNP Detail		 Chr5:115116602 Cpgi16346 707 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240770036
MGI SNP Detail		 Chr5:115116652 Cpgi16346 657 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs258729065
MGI SNP Detail		 Chr5:115116689 Cpgi16346 620 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226143514
MGI SNP Detail		 Chr5:115116747 Cpgi16346 562 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238397136
MGI SNP Detail		 Chr5:115116754 Cpgi16346 555 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264673369
MGI SNP Detail		 Chr5:115116758 Cpgi16346 551 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233906321
MGI SNP Detail		 Chr5:115116795 Cpgi16346 514 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259391809
MGI SNP Detail		 Chr5:115116796 Cpgi16346 513 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs216893025
MGI SNP Detail		 Chr5:115116799 Cpgi16346 510 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs226759930
MGI SNP Detail		 Chr5:115116850 Cpgi16346 459 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs244448593
MGI SNP Detail		 Chr5:115116925 Cpgi16346 384 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213668000
MGI SNP Detail		 Chr5:115116939 Cpgi16346 370 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581400230
MGI SNP Detail		 Chr5:115116951 Cpgi16346 358 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230705804
MGI SNP Detail		 Chr5:115117114 Cpgi16346 195 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249094014
MGI SNP Detail		 Chr5:115117123 Cpgi16346 186 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs218715829
MGI SNP Detail		 Chr5:115117131 Cpgi16346 178 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs239137868
MGI SNP Detail		 Chr5:115117142 Cpgi16346 167 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263236226
MGI SNP Detail		 Chr5:115117147 Cpgi16346 162 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs220806666
MGI SNP Detail		 Chr5:115117236 Cpgi16346 73 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33507481
MGI SNP Detail		 Chr5:115117240 Cpgi16346 69 bp proximal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G A G G A A G
rs252317311
MGI SNP Detail		 Chr5:115117317 Cpgi16346 within coordinates of
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs219763207
MGI SNP Detail		 Chr5:115117415 Cpgi16346 within coordinates of
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245484171
MGI SNP Detail		 Chr5:115117470 Cpgi16346 within coordinates of
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261714273
MGI SNP Detail		 Chr5:115117472 Cpgi16346 within coordinates of
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227289655
MGI SNP Detail		 Chr5:115117637 Cpgi16346 158 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs32144201
MGI SNP Detail		 Chr5:115117680 Cpgi16346 201 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP G/T G T
rs581143668
MGI SNP Detail		 Chr5:115117702 Cpgi16346 223 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258333779
MGI SNP Detail		 Chr5:115117770 Cpgi16346 291 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584238809
MGI SNP Detail		 Chr5:115118128 Cpgi16346 649 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs226987552
MGI SNP Detail		 Chr5:115118176 Cpgi16346 697 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs244671355
MGI SNP Detail		 Chr5:115118183 Cpgi16346 704 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A
rs255261157
MGI SNP Detail		 Chr5:115118294 Cpgi16346 815 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs32144202
MGI SNP Detail		 Chr5:115118360 Cpgi16346 881 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs252581141
MGI SNP Detail		 Chr5:115118367 Cpgi16346 888 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs219136188
MGI SNP Detail		 Chr5:115118412 Cpgi16346 933 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs32144203
MGI SNP Detail		 Chr5:115118415 Cpgi16346 936 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs252799674
MGI SNP Detail		 Chr5:115118493 Cpgi16346 1014 bp distal
Gm71622 within coordinates of
Gm71625 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs578468909
MGI SNP Detail		 Chr5:115118603 Cpgi16346 1124 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs582582724
MGI SNP Detail		 Chr5:115118653 Cpgi16346 1174 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C/G C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C A C C C C
rs585249610
MGI SNP Detail		 Chr5:115118654 Cpgi16346 1175 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs578947578
MGI SNP Detail		 Chr5:115118673 Cpgi16346 1194 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs214809921
MGI SNP Detail		 Chr5:115118688 Cpgi16346 1209 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232520561
MGI SNP Detail		 Chr5:115118704 Cpgi16346 1225 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs582633290
MGI SNP Detail		 Chr5:115118820 Cpgi16346 1341 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250976467
MGI SNP Detail		 Chr5:115118859 Cpgi16346 1380 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219821691
MGI SNP Detail		 Chr5:115118861 Cpgi16346 1382 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs235647430
MGI SNP Detail		 Chr5:115118866 Cpgi16346 1387 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs261226368
MGI SNP Detail		 Chr5:115119095 Cpgi16346 1616 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs227145264
MGI SNP Detail		 Chr5:115119099 Cpgi16346 1620 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs250318321
MGI SNP Detail		 Chr5:115119100 Cpgi16346 1621 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258187755
MGI SNP Detail		 Chr5:115119103 Cpgi16346 1624 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs220784479
MGI SNP Detail		 Chr5:115119156 Cpgi16346 1677 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238572460
MGI SNP Detail		 Chr5:115119187 Cpgi16346 1708 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255566051
MGI SNP Detail		 Chr5:115119190 Cpgi16346 1711 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs32145274
MGI SNP Detail		 Chr5:115119225 Cpgi16346 1746 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs249030772
MGI SNP Detail		 Chr5:115119246 Cpgi16346 1767 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs586160888
MGI SNP Detail		 Chr5:115119265 Cpgi16346 1786 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs32145275
MGI SNP Detail		 Chr5:115119268 Cpgi16346 1789 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs578574117
MGI SNP Detail		 Chr5:115119270 Cpgi16346 1791 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233094229
MGI SNP Detail		 Chr5:115119277 Cpgi16346 1798 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs247186590
MGI SNP Detail		 Chr5:115119307 Cpgi16346 1828 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214874915
MGI SNP Detail		 Chr5:115119317 Cpgi16346 1838 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs226217971
MGI SNP Detail		 Chr5:115119369 Cpgi16346 1890 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244810233
MGI SNP Detail		 Chr5:115119373 Cpgi16346 1894 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212630633
MGI SNP Detail		 Chr5:115119399 Cpgi16346 1920 bp distal
Gm71622 within coordinates of
Hnf1aos1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
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Showing SNP(s) 1 - 96 of 96
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory