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Mouse SNP Summary
Symbol
Name
ID 		Cpgi17778
CpG island 17778
MGI:5682853

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Showing SNP(s) 1 - 67 of 67

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265724263
MGI SNP Detail		 Chr6:97992964 Cpgi17778 1979 bp proximal
Mitf within coordinates of
Rr145432 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585474246
MGI SNP Detail		 Chr6:97993006 Cpgi17778 1937 bp proximal
Mitf within coordinates of
Rr145432 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227549869
MGI SNP Detail		 Chr6:97993061 Cpgi17778 1882 bp proximal
Mitf within coordinates of
Rr145432 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C T T T C T C C C C C C C T C C C C
rs245907544
MGI SNP Detail		 Chr6:97993066 Cpgi17778 1877 bp proximal
Mitf within coordinates of
Rr145432 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213806380
MGI SNP Detail		 Chr6:97993070 Cpgi17778 1873 bp proximal
Mitf within coordinates of
Rr145432 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47337634
MGI SNP Detail		 Chr6:97993080 Cpgi17778 1863 bp proximal
Mitf within coordinates of
Rr145432 within coordinates of
 SNP A A A
rs252369817
MGI SNP Detail		 Chr6:97993112 Cpgi17778 1831 bp proximal
Mitf within coordinates of
Rr145432 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs219180221
MGI SNP Detail		 Chr6:97993116 Cpgi17778 1827 bp proximal
Mitf within coordinates of
Rr145432 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs30615223
MGI SNP Detail		 Chr6:97993160 Cpgi17778 1783 bp proximal
Mitf within coordinates of
 SNP A/G A G A
rs259117903
MGI SNP Detail		 Chr6:97993228 Cpgi17778 1715 bp proximal
Mitf within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A A C A A C C C A C A A A A A A A C A A A A
rs214911174
MGI SNP Detail		 Chr6:97993243 Cpgi17778 1700 bp proximal
Mitf within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231830694
MGI SNP Detail		 Chr6:97993338 Cpgi17778 1605 bp proximal
Mitf within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs47579522
MGI SNP Detail		 Chr6:97993349 Cpgi17778 1594 bp proximal
Mitf within coordinates of
 SNP A/G G G G G G G A G G G A G A A G
rs218463026
MGI SNP Detail		 Chr6:97993378 Cpgi17778 1565 bp proximal
Mitf within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs236979655
MGI SNP Detail		 Chr6:97993382 Cpgi17778 1561 bp proximal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580658621
MGI SNP Detail		 Chr6:97993398 Cpgi17778 1545 bp proximal
Mitf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583375144
MGI SNP Detail		 Chr6:97993424 Cpgi17778 1519 bp proximal
Mitf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46887292
MGI SNP Detail		 Chr6:97993431 Cpgi17778 1512 bp proximal
Mitf within coordinates of
 SNP G/T G G G G G G T G G G T G T T G
rs30462281
MGI SNP Detail		 Chr6:97993539 Cpgi17778 1404 bp proximal
Mitf within coordinates of
 SNP A/G A G A G G A A G G G A G A G G G
rs250588342
MGI SNP Detail		 Chr6:97993564 Cpgi17778 1379 bp proximal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263810018
MGI SNP Detail		 Chr6:97993594 Cpgi17778 1349 bp proximal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227455199
MGI SNP Detail		 Chr6:97993610 Cpgi17778 1333 bp proximal
Mitf within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239779827
MGI SNP Detail		 Chr6:97993679 Cpgi17778 1264 bp proximal
Mitf within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs257758253
MGI SNP Detail		 Chr6:97993749 Cpgi17778 1194 bp proximal
Mitf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225104281
MGI SNP Detail		 Chr6:97993752 Cpgi17778 1191 bp proximal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249054332
MGI SNP Detail		 Chr6:97993793 Cpgi17778 1150 bp proximal
Mitf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs266097651
MGI SNP Detail		 Chr6:97993808 Cpgi17778 1135 bp proximal
Mitf within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232984754
MGI SNP Detail		 Chr6:97993827 Cpgi17778 1116 bp proximal
Mitf within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C A C C A A A C A C C C C C C C C C C C C
rs258267065
MGI SNP Detail		 Chr6:97993901 Cpgi17778 1042 bp proximal
Mitf within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215156528
MGI SNP Detail		 Chr6:97993936 Cpgi17778 1007 bp proximal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231886426
MGI SNP Detail		 Chr6:97993938 Cpgi17778 1005 bp proximal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G A A A G A G G G G G G G A G G G G
rs585749946
MGI SNP Detail		 Chr6:97993977 Cpgi17778 966 bp proximal
Mitf within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs580033549
MGI SNP Detail		 Chr6:97993990 Cpgi17778 953 bp proximal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243475288
MGI SNP Detail		 Chr6:97994015 Cpgi17778 928 bp proximal
Mitf within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212671022
MGI SNP Detail		 Chr6:97994088 Cpgi17778 855 bp proximal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235943271
MGI SNP Detail		 Chr6:97994225 Cpgi17778 718 bp proximal
Mitf within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255782475
MGI SNP Detail		 Chr6:97994410 Cpgi17778 533 bp proximal
Mitf within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs227532187
MGI SNP Detail		 Chr6:97994469 Cpgi17778 474 bp proximal
Mitf within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239757613
MGI SNP Detail		 Chr6:97994472 Cpgi17778 471 bp proximal
Mitf within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A C A A C C C A C A A A A A A A A A A A A
rs253987255
MGI SNP Detail		 Chr6:97994534 Cpgi17778 409 bp proximal
Mitf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221379251
MGI SNP Detail		 Chr6:97994604 Cpgi17778 339 bp proximal
Mitf within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs239792807
MGI SNP Detail		 Chr6:97994614 Cpgi17778 329 bp proximal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257581291
MGI SNP Detail		 Chr6:97994642 Cpgi17778 301 bp proximal
Mitf within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219039388
MGI SNP Detail		 Chr6:97994657 Cpgi17778 286 bp proximal
Mitf within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244277160
MGI SNP Detail		 Chr6:97994663 Cpgi17778 280 bp proximal
Mitf within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264503545
MGI SNP Detail		 Chr6:97994687 Cpgi17778 256 bp proximal
Mitf within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48544331
MGI SNP Detail		 Chr6:97994690 Cpgi17778 253 bp proximal
Mitf within coordinates of
 SNP C/T T T T T T T C T T T T T T T T
rs253039429
MGI SNP Detail		 Chr6:97994715 Cpgi17778 228 bp proximal
Mitf within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs51055473
MGI SNP Detail		 Chr6:97994758 Cpgi17778 185 bp proximal
Mitf within coordinates of
 SNP G/T G G G G G G G G G G T G T T G
rs50907008
MGI SNP Detail		 Chr6:97994884 Cpgi17778 59 bp proximal
Mitf within coordinates of
 SNP A/G A A A A A A G A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs45997580
MGI SNP Detail		 Chr6:97994931 Cpgi17778 12 bp proximal
Mitf within coordinates of
 SNP A/G A A A A A A G A A A A A A A A
rs49633562
MGI SNP Detail		 Chr6:97995127 Cpgi17778 within coordinates of
Mitf within coordinates of
 SNP C/T T T T T T T C T T T T T T T T
rs234303794
MGI SNP Detail		 Chr6:97995170 Cpgi17778 2 bp distal
Mitf within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259936775
MGI SNP Detail		 Chr6:97995187 Cpgi17778 19 bp distal
Mitf within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217674757
MGI SNP Detail		 Chr6:97995445 Cpgi17778 277 bp distal
Mitf within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs52098434
MGI SNP Detail		 Chr6:97995648 Cpgi17778 480 bp distal
Mitf within coordinates of
 SNP C/T C C C C C C C C C C C C C C T
rs583779137
MGI SNP Detail		 Chr6:97995986 Cpgi17778 818 bp distal
Mitf within coordinates of
Tssr57953 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G A A G G G G G G G G G G G G G
rs221398628
MGI SNP Detail		 Chr6:97996009 Cpgi17778 841 bp distal
Mitf within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233295498
MGI SNP Detail		 Chr6:97996010 Cpgi17778 842 bp distal
Mitf within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs47542154
MGI SNP Detail		 Chr6:97996193 Cpgi17778 1025 bp distal
Mitf within coordinates of
 SNP A/G A A A A A A G A A A A A A G
rs6271717
MGI SNP Detail		 Chr6:97996610 Cpgi17778 1442 bp distal
Mitf within coordinates of
 SNP C/T T T T T T T T C C T T T T C C C
rs45953992
MGI SNP Detail		 Chr6:97996730 Cpgi17778 1562 bp distal
Mitf within coordinates of
 SNP A/G A A A A A A G A A A A A A A A
rs47957445
MGI SNP Detail		 Chr6:97996824 Cpgi17778 1656 bp distal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G A G A G G
rs225893907
MGI SNP Detail		 Chr6:97996873 Cpgi17778 1705 bp distal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46110603
MGI SNP Detail		 Chr6:97996878 Cpgi17778 1710 bp distal
Mitf within coordinates of
 SNP A/G G G G G G G A G G G G G G G A
rs46616076
MGI SNP Detail		 Chr6:97997063 Cpgi17778 1895 bp distal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G A G A A G
rs48041503
MGI SNP Detail		 Chr6:97997104 Cpgi17778 1936 bp distal
Mitf within coordinates of
 SNP A/G G G G G G G G G G G G G G G A
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Showing SNP(s) 1 - 67 of 67
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory