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Mouse SNP Summary
Symbol
Name
ID 		Cpgi18280
CpG island 18280
MGI:5683355

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Showing SNP(s) 1 - 71 of 71

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253193156
MGI SNP Detail		 Chr7:5080947 Cpgi18280 1988 bp proximal
U2af2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216322489
MGI SNP Detail		 Chr7:5080971 Cpgi18280 1964 bp proximal
U2af2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220625578
MGI SNP Detail		 Chr7:5081085 Cpgi18280 1850 bp proximal
U2af2 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs237379039
MGI SNP Detail		 Chr7:5081161 Cpgi18280 1774 bp proximal
U2af2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs225517425
MGI SNP Detail		 Chr7:5081176 Cpgi18280 1759 bp proximal
U2af2 within coordinates of
 SNP A/T A T
rs257250002
MGI SNP Detail		 Chr7:5081233 Cpgi18280 1702 bp proximal
U2af2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs248554935
MGI SNP Detail		 Chr7:5081277 Cpgi18280 1658 bp proximal
U2af2 within coordinates of
 SNP A/G G A
rs33894842
MGI SNP Detail		 Chr7:5081328 Cpgi18280 1607 bp proximal
U2af2 within coordinates of
 SNP A/T A A T A T A
rs257176795
MGI SNP Detail		 Chr7:5081329 Cpgi18280 1606 bp proximal
U2af2 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221435258
MGI SNP Detail		 Chr7:5081383 Cpgi18280 1552 bp proximal
U2af2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs108901282
MGI SNP Detail		 Chr7:5081409 Cpgi18280 1526 bp proximal
U2af2 within coordinates of
 SNP A A A A A A
rs266094127
MGI SNP Detail		 Chr7:5081421 Cpgi18280 1514 bp proximal
U2af2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227512823
MGI SNP Detail		 Chr7:5081592 Cpgi18280 1343 bp proximal
U2af2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs253694484
MGI SNP Detail		 Chr7:5081644 Cpgi18280 1291 bp proximal
U2af2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257340371
MGI SNP Detail		 Chr7:5081651 Cpgi18280 1284 bp proximal
U2af2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226235239
MGI SNP Detail		 Chr7:5081658 Cpgi18280 1277 bp proximal
U2af2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246187451
MGI SNP Detail		 Chr7:5081683 Cpgi18280 1252 bp proximal
U2af2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216287518
MGI SNP Detail		 Chr7:5081737 Cpgi18280 1198 bp proximal
U2af2 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs581554227
MGI SNP Detail		 Chr7:5081847 Cpgi18280 1088 bp proximal
U2af2 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs242597870
MGI SNP Detail		 Chr7:5081930 Cpgi18280 1005 bp proximal
U2af2 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs255080336
MGI SNP Detail		 Chr7:5081942 Cpgi18280 993 bp proximal
U2af2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212528564
MGI SNP Detail		 Chr7:5081996 Cpgi18280 939 bp proximal
U2af2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs235691701
MGI SNP Detail		 Chr7:5082028 Cpgi18280 907 bp proximal
U2af2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs262096267
MGI SNP Detail		 Chr7:5082075 Cpgi18280 860 bp proximal
U2af2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs220215338
MGI SNP Detail		 Chr7:5082138 Cpgi18280 797 bp proximal
U2af2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232899469
MGI SNP Detail		 Chr7:5082163 Cpgi18280 772 bp proximal
U2af2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585282000
MGI SNP Detail		 Chr7:5082587 Cpgi18280 348 bp proximal
U2af2 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586697085
MGI SNP Detail		 Chr7:5082588 Cpgi18280 347 bp proximal
U2af2 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584289117
MGI SNP Detail		 Chr7:5082760 Cpgi18280 175 bp proximal
Rr167875 within coordinates of
U2af2 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs578821774
MGI SNP Detail		 Chr7:5082786 Cpgi18280 149 bp proximal
Rr167875 within coordinates of
U2af2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs32246310
MGI SNP Detail		 Chr7:5082945 Cpgi18280 within coordinates of
Rr167875 within coordinates of
 SNP C/T C C T C C C
rs222018205
MGI SNP Detail		 Chr7:5083004 Cpgi18280 within coordinates of
Rr167875 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs250048263
MGI SNP Detail		 Chr7:5083041 Cpgi18280 within coordinates of
Rr167875 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs264426409
MGI SNP Detail		 Chr7:5083053 Cpgi18280 within coordinates of
Rr167875 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31230666
MGI SNP Detail		 Chr7:5083077 Cpgi18280 within coordinates of
Rr167875 within coordinates of
 SNP C/G C C G C C C
rs242086391
MGI SNP Detail		 Chr7:5083185 Cpgi18280 within coordinates of
Rr167875 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257305896
MGI SNP Detail		 Chr7:5083195 Cpgi18280 within coordinates of
Rr167875 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs32291999
MGI SNP Detail		 Chr7:5083214 Cpgi18280 within coordinates of
Rr167875 within coordinates of
Tssr64420 within coordinates of
 SNP A/G G G A G G G
rs246155180
MGI SNP Detail		 Chr7:5083739 Cpgi18280 within coordinates of
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51328913
MGI SNP Detail		 Chr7:5083936 Cpgi18280 within coordinates of
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP A/G G G G G G G A G G G A G G A G
rs232820566
MGI SNP Detail		 Chr7:5083970 Cpgi18280 within coordinates of
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260526822
MGI SNP Detail		 Chr7:5083973 Cpgi18280 within coordinates of
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581935046
MGI SNP Detail		 Chr7:5084199 Cpgi18280 186 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs51548232
MGI SNP Detail		 Chr7:5084245 Cpgi18280 232 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP A/C A A A A A A C A A A C A C A
rs237461017
MGI SNP Detail		 Chr7:5084490 Cpgi18280 477 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45648575
MGI SNP Detail		 Chr7:5084543 Cpgi18280 530 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP C/T T T T T T T C T T T C T T T T
rs45812928
MGI SNP Detail		 Chr7:5084579 Cpgi18280 566 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP C/T T T T T T T C T T T C T T T T
rs584247164
MGI SNP Detail		 Chr7:5084610 Cpgi18280 597 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP A/C/T A A A A A A A A A A A A C A A A A A A A A A A T A
rs233045446
MGI SNP Detail		 Chr7:5084627 Cpgi18280 614 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G C G G G G G G G C G G G G
rs252105550
MGI SNP Detail		 Chr7:5084714 Cpgi18280 701 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs578442400
MGI SNP Detail		 Chr7:5084727 Cpgi18280 714 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C
rs582741032
MGI SNP Detail		 Chr7:5084786 Cpgi18280 773 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C C C C C C C C C C C C C
rs216712412
MGI SNP Detail		 Chr7:5084936 Cpgi18280 923 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240407935
MGI SNP Detail		 Chr7:5085514 Cpgi18280 1501 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264195868
MGI SNP Detail		 Chr7:5085540 Cpgi18280 1527 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49380221
MGI SNP Detail		 Chr7:5085551 Cpgi18280 1538 bp distal
Epn1 within coordinates of
Rr167875 within coordinates of
 SNP A/T T T T T T T T T T T T T T A T
rs249355039
MGI SNP Detail		 Chr7:5085623 Cpgi18280 1610 bp distal
Epn1 within coordinates of
 SNP A/G A G
rs251149473
MGI SNP Detail		 Chr7:5085677 Cpgi18280 1664 bp distal
Epn1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220177594
MGI SNP Detail		 Chr7:5085697 Cpgi18280 1684 bp distal
Epn1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240250170
MGI SNP Detail		 Chr7:5085701 Cpgi18280 1688 bp distal
Epn1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259704452
MGI SNP Detail		 Chr7:5085702 Cpgi18280 1689 bp distal
Epn1 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs233638231
MGI SNP Detail		 Chr7:5085731 Cpgi18280 1718 bp distal
Epn1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T C T T T C T T T T T T C T T T T T T T C T T T C
rs248076591
MGI SNP Detail		 Chr7:5085732 Cpgi18280 1719 bp distal
Epn1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs46006859
MGI SNP Detail		 Chr7:5085784 Cpgi18280 1771 bp distal
Epn1 within coordinates of
 SNP A/T T T T T T T A T T T A T T T T
rs229364399
MGI SNP Detail		 Chr7:5085791 Cpgi18280 1778 bp distal
Epn1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108174744
MGI SNP Detail		 Chr7:5085845 Cpgi18280 1832 bp distal
Epn1 within coordinates of
 SNP C/T C T C
rs239667843
MGI SNP Detail		 Chr7:5085849 Cpgi18280 1836 bp distal
Epn1 within coordinates of
 SNP C/T T C
rs586335041
MGI SNP Detail		 Chr7:5085853 Cpgi18280 1840 bp distal
Epn1 within coordinates of
 SNP T T T T T T T T T T T T T T T
rs586627110
MGI SNP Detail		 Chr7:5085914 Cpgi18280 1901 bp distal
Epn1 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579792635
MGI SNP Detail		 Chr7:5085922 Cpgi18280 1909 bp distal
Epn1 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579589168
MGI SNP Detail		 Chr7:5085973 Cpgi18280 1960 bp distal
Epn1 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
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Showing SNP(s) 1 - 71 of 71
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory