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Mouse SNP Summary
Symbol
Name
ID 		Cpgi18835
CpG island 18835
MGI:5683910

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Showing SNP(s) 1 - 78 of 78

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258458303
MGI SNP Detail		 Chr7:30813374 Cpgi18835 1986 bp proximal
Hpn within coordinates of
 SNP A/C C A
rs46585986
MGI SNP Detail		 Chr7:30813396 Cpgi18835 1964 bp proximal
Hpn within coordinates of
 SNP G/T G G T G
rs51476985
MGI SNP Detail		 Chr7:30813447 Cpgi18835 1913 bp proximal
Hpn within coordinates of
 SNP A/T T A T A
rs32508331
MGI SNP Detail		 Chr7:30813485 Cpgi18835 1875 bp proximal
Hpn within coordinates of
 SNP C/G C G C G
rs232122413
MGI SNP Detail		 Chr7:30813501 Cpgi18835 1859 bp proximal
Hpn within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs245654944
MGI SNP Detail		 Chr7:30813557 Cpgi18835 1803 bp proximal
Hpn within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234205726
MGI SNP Detail		 Chr7:30813660 Cpgi18835 1700 bp proximal
Hpn within coordinates of
 SNP A/C A C
rs257687410
MGI SNP Detail		 Chr7:30813702 Cpgi18835 1658 bp proximal
Hpn within coordinates of
 SNP A/G G A
rs250181994
MGI SNP Detail		 Chr7:30813705 Cpgi18835 1655 bp proximal
Hpn within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263776363
MGI SNP Detail		 Chr7:30813734 Cpgi18835 1626 bp proximal
Hpn within coordinates of
 SNP A/G G A
rs230490717
MGI SNP Detail		 Chr7:30813735 Cpgi18835 1625 bp proximal
Hpn within coordinates of
 SNP A/T A T
rs31240820
MGI SNP Detail		 Chr7:30813747 Cpgi18835 1613 bp proximal
Hpn within coordinates of
 SNP C/T C C T C T
rs214175166
MGI SNP Detail		 Chr7:30813793 Cpgi18835 1567 bp proximal
Hpn within coordinates of
 SNP C/T T C
rs236284427
MGI SNP Detail		 Chr7:30813831 Cpgi18835 1529 bp proximal
Hpn within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T
rs262519987
MGI SNP Detail		 Chr7:30813861 Cpgi18835 1499 bp proximal
Hpn within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T T T T T
rs212215584
MGI SNP Detail		 Chr7:30813936 Cpgi18835 1424 bp proximal
Hpn within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32291198
MGI SNP Detail		 Chr7:30813952 Cpgi18835 1408 bp proximal
Hpn within coordinates of
 SNP A/G G G A G A
rs250283904
MGI SNP Detail		 Chr7:30814040 Cpgi18835 1320 bp proximal
Hpn within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A
rs222587963
MGI SNP Detail		 Chr7:30814043 Cpgi18835 1317 bp proximal
Hpn within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C
rs242726380
MGI SNP Detail		 Chr7:30814045 Cpgi18835 1315 bp proximal
Hpn within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252815665
MGI SNP Detail		 Chr7:30814215 Cpgi18835 1145 bp proximal
Hpn within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49728802
MGI SNP Detail		 Chr7:30814267 Cpgi18835 1093 bp proximal
Hpn within coordinates of
 SNP C C C C
rs242773740
MGI SNP Detail		 Chr7:30814273 Cpgi18835 1087 bp proximal
Hpn within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T
rs265216184
MGI SNP Detail		 Chr7:30814281 Cpgi18835 1079 bp proximal
Hpn within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31707080
MGI SNP Detail		 Chr7:30814321 Cpgi18835 1039 bp proximal
Hpn within coordinates of
 SNP A/G G G A G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240305054
MGI SNP Detail		 Chr7:30814325 Cpgi18835 1035 bp proximal
Hpn within coordinates of
 SNP G/T G T
rs31861517
MGI SNP Detail		 Chr7:30814356 Cpgi18835 1004 bp proximal
Hpn within coordinates of
 SNP A/G G A G G
rs229510014
MGI SNP Detail		 Chr7:30814374 Cpgi18835 986 bp proximal
Hpn within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32245702
MGI SNP Detail		 Chr7:30814414 Cpgi18835 946 bp proximal
Hpn within coordinates of
 SNP A/G A G G
rs262865976
MGI SNP Detail		 Chr7:30814491 Cpgi18835 869 bp proximal
Hpn within coordinates of
 SNP A/G A G
rs230264773
MGI SNP Detail		 Chr7:30814504 Cpgi18835 856 bp proximal
Hpn within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C
rs251602765
MGI SNP Detail		 Chr7:30814515 Cpgi18835 845 bp proximal
Hpn within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212375110
MGI SNP Detail		 Chr7:30814528 Cpgi18835 832 bp proximal
Hpn within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224856575
MGI SNP Detail		 Chr7:30814530 Cpgi18835 830 bp proximal
Hpn within coordinates of
 SNP A/G A G
rs248217858
MGI SNP Detail		 Chr7:30814552 Cpgi18835 808 bp proximal
Hpn within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs216530500
MGI SNP Detail		 Chr7:30814564 Cpgi18835 796 bp proximal
Hpn within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs236263356
MGI SNP Detail		 Chr7:30814645 Cpgi18835 715 bp proximal
Hpn within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252775783
MGI SNP Detail		 Chr7:30814695 Cpgi18835 665 bp proximal
Hpn within coordinates of
Tssr71933 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs224968894
MGI SNP Detail		 Chr7:30814723 Cpgi18835 637 bp proximal
Tssr71933 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A A G G G G G G G G G G G G G G G
rs238085346
MGI SNP Detail		 Chr7:30814839 Cpgi18835 521 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs257522220
MGI SNP Detail		 Chr7:30814911 Cpgi18835 449 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs219758155
MGI SNP Detail		 Chr7:30814957 Cpgi18835 403 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs49126406
MGI SNP Detail		 Chr7:30815085 Cpgi18835 275 bp proximal
 SNP A/G G A
rs258730562
MGI SNP Detail		 Chr7:30815220 Cpgi18835 140 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47965184
MGI SNP Detail		 Chr7:30815245 Cpgi18835 115 bp proximal
 SNP C/T C T
rs239521875
MGI SNP Detail		 Chr7:30815247 Cpgi18835 113 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265802859
MGI SNP Detail		 Chr7:30815359 Cpgi18835 1 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230458256
MGI SNP Detail		 Chr7:30815367 Cpgi18835 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47449299
MGI SNP Detail		 Chr7:30815370 Cpgi18835 within coordinates of
 SNP G/T G T
rs51994766
MGI SNP Detail		 Chr7:30815380 Cpgi18835 within coordinates of
 SNP A/G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225055315
MGI SNP Detail		 Chr7:30815397 Cpgi18835 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49032055
MGI SNP Detail		 Chr7:30815408 Cpgi18835 within coordinates of
 SNP C/G G C
rs49137171
MGI SNP Detail		 Chr7:30815425 Cpgi18835 within coordinates of
 SNP C/G G C
rs236227487
MGI SNP Detail		 Chr7:30815453 Cpgi18835 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48683778
MGI SNP Detail		 Chr7:30815456 Cpgi18835 within coordinates of
 SNP C C C C C C
rs52105479
MGI SNP Detail		 Chr7:30815550 Cpgi18835 1 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C G G G G C G G C C C C C C C G G G C G C C C G C C G C G C C
rs52527027
MGI SNP Detail		 Chr7:30815551 Cpgi18835 2 bp distal
 SNP G/T G G G G T
rs262457236
MGI SNP Detail		 Chr7:30815558 Cpgi18835 9 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T T T T C T T C C C C C C C T T T C T C C C T C C T T T C C
rs219843551
MGI SNP Detail		 Chr7:30815571 Cpgi18835 22 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs48837214
MGI SNP Detail		 Chr7:30815629 Cpgi18835 80 bp distal
 SNP A/C A C
rs50779954
MGI SNP Detail		 Chr7:30815774 Cpgi18835 225 bp distal
 SNP C/T T C C T C
rs222554347
MGI SNP Detail		 Chr7:30815956 Cpgi18835 407 bp distal
Scn1b within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs225644236
MGI SNP Detail		 Chr7:30816217 Cpgi18835 668 bp distal
Scn1b within coordinates of
 SNP A/G G A
rs264751530
MGI SNP Detail		 Chr7:30816544 Cpgi18835 995 bp distal
Scn1b within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225021865
MGI SNP Detail		 Chr7:30816633 Cpgi18835 1084 bp distal
Scn1b within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs244791032
MGI SNP Detail		 Chr7:30816756 Cpgi18835 1207 bp distal
Scn1b within coordinates of
 SNP C/T T C
rs33894719
MGI SNP Detail		 Chr7:30816786 Cpgi18835 1237 bp distal
Scn1b within coordinates of
 SNP C/T T C C
rs33895042
MGI SNP Detail		 Chr7:30816788 Cpgi18835 1239 bp distal
Scn1b within coordinates of
 SNP A/T T A T T T
rs33894279
MGI SNP Detail		 Chr7:30816806 Cpgi18835 1257 bp distal
Scn1b within coordinates of
 SNP C/T C C T C T
rs8269129
MGI SNP Detail		 Chr7:30817142 Cpgi18835 1593 bp distal
Scn1b within coordinates of
 SNP A/G A A A A A A A A G A A A G G G
rs31776091
MGI SNP Detail		 Chr7:30817303 Cpgi18835 1754 bp distal
Scn1b within coordinates of
 SNP A/C A C A A A
rs8269131
MGI SNP Detail		 Chr7:30817476 Cpgi18835 1927 bp distal
Scn1b within coordinates of
 SNP C/T T T T T T T T T T T T T T C
rs8269132
MGI SNP Detail		 Chr7:30817477 Cpgi18835 1928 bp distal
Scn1b within coordinates of
 SNP C/T T T T T T T T T T T T T T C
rs31405953
MGI SNP Detail		 Chr7:30817537 Cpgi18835 1988 bp distal
Scn1b within coordinates of
 SNP C/T C T C T
rs252358369
MGI SNP Detail		 Chr7:30817538 Cpgi18835 1989 bp distal
Scn1b within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217119445
MGI SNP Detail		 Chr7:30817539 Cpgi18835 1990 bp distal
Scn1b within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G
rs232652183
MGI SNP Detail		 Chr7:30817542 Cpgi18835 1993 bp distal
Scn1b within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G G G G G G G G G G T T G G
rs263225920
MGI SNP Detail		 Chr7:30817547 Cpgi18835 1998 bp distal
Scn1b within coordinates of
 SNP A/G G G G G G G G G G G G A G G G G A G A G G G G G A A G A
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Showing SNP(s) 1 - 78 of 78
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory